RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 CFC1BP0CG36 223 aa6.89□□□□□ -1.31
TRIM39-202ENST00000376659 CFC1P0CG37 223 aa6.89□□□□□ -1.31
TRIM39-202ENST00000376659 IFITM1P13164 125 aa6.89□□□□□ -1.31
TRIM39-202ENST00000376659 SBSPONQ8IVN8 264 aa6.89□□□□□ -1.31
TRIM39-202ENST00000376659 LRRK2Q5S007 2527 aa6.89□□□□□ -1.31
TRIM39-202ENST00000376659 IGHV3-53P01767 116 aa6.89□□□□□ -1.31
TRIM39-202ENST00000376659 CD28P10747 220 aa6.89□□□□□ -1.31
TRIM39-202ENST00000376659 WIPF1O43516 503 aa6.89□□□□□ -1.31
TRIM39-202ENST00000376659 NDUFA11Q86Y39 141 aa6.89□□□□□ -1.31
TRIM39-202ENST00000376659 HIST1H4GQ99525 98 aa6.89□□□□□ -1.31
TRIM39-202ENST00000376659 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.88□□□□□ -1.31
TRIM39-202ENST00000376659 LINC01600Q96MT4 127 aa6.88□□□□□ -1.31
TRIM39-202ENST00000376659 PEMTQ9UBM1 199 aa6.88□□□□□ -1.31
TRIM39-202ENST00000376659 A8MWV9 139 aa6.88□□□□□ -1.31
TRIM39-202ENST00000376659 F5H768 121 aa6.88□□□□□ -1.31
TRIM39-202ENST00000376659 J3QQQ9 107 aa6.88□□□□□ -1.31
TRIM39-202ENST00000376659 SNCGO76070 127 aa6.88□□□□□ -1.31
TRIM39-202ENST00000376659 CSNK1G2-AS1Q8NCQ2 148 aa6.88□□□□□ -1.31
TRIM39-202ENST00000376659 ABCA12Q86UK0 2595 aa6.87□□□□□ -1.31
TRIM39-202ENST00000376659 LINC00694P0DN24 101 aa6.87□□□□□ -1.31
TRIM39-202ENST00000376659 TMEM263Q8WUH6 116 aaKnown RBP6.87□□□□□ -1.31
TRIM39-202ENST00000376659 FLNAP21333 2647 aaKnown RBP6.87□□□□□ -1.31
TRIM39-202ENST00000376659 ZNF415Q09FC8 603 aa6.87□□□□□ -1.31
TRIM39-202ENST00000376659 CEMP1Q6PRD7 247 aaPredicted RBP6.87□□□□□ -1.31
TRIM39-202ENST00000376659 VWFP04275 2813 aa6.86□□□□□ -1.31
TRIM39-202ENST00000376659 A0A0J9YXV3 536 aa6.86□□□□□ -1.31
TRIM39-202ENST00000376659 TINCRA0A1B0GVN0 87 aa6.86□□□□□ -1.31
TRIM39-202ENST00000376659 TMEM126AQ9H061 195 aa6.86□□□□□ -1.31
TRIM39-202ENST00000376659 F5H697 171 aa6.86□□□□□ -1.31
TRIM39-202ENST00000376659 DNAJC30Q96LL9 226 aa6.86□□□□□ -1.31
TRIM39-202ENST00000376659 FAM19A5Q7Z5A7 132 aaPredicted RBP6.85□□□□□ -1.31
TRIM39-202ENST00000376659 IGHV3-73A0A0B4J1V6 119 aa6.85□□□□□ -1.31
TRIM39-202ENST00000376659 RNASE1P07998 156 aaKnown RBP6.85□□□□□ -1.31
TRIM39-202ENST00000376659 KRTAP10-3P60369 221 aa6.85□□□□□ -1.31
TRIM39-202ENST00000376659 NTM-AS1Q6ZSK4 140 aa6.85□□□□□ -1.31
TRIM39-202ENST00000376659 INSP01308 110 aa6.84□□□□□ -1.31
TRIM39-202ENST00000376659 TIMM21Q9BVV7 248 aa6.84□□□□□ -1.31
TRIM39-202ENST00000376659 SPANXA1Q9NS26 97 aa6.84□□□□□ -1.31
TRIM39-202ENST00000376659 EPG5Q9HCE0 2579 aa6.84□□□□□ -1.31
TRIM39-202ENST00000376659 A0A0J9YXY3 114 aa6.84□□□□□ -1.31
TRIM39-202ENST00000376659 IGHV3-30-3P0DP02 117 aa6.84□□□□□ -1.31
TRIM39-202ENST00000376659 HIST2H2BCQ6DN03 193 aa6.84□□□□□ -1.31
TRIM39-202ENST00000376659 SPANXDQ9BXN6 97 aa6.84□□□□□ -1.31
TRIM39-202ENST00000376659 SPANXCQ9NY87 97 aa6.84□□□□□ -1.31
TRIM39-202ENST00000376659 ITPR2Q14571 2701 aa6.84□□□□□ -1.32
TRIM39-202ENST00000376659 TRAV4A0A0B4J268 109 aa6.83□□□□□ -1.32
TRIM39-202ENST00000376659 A0A0B4J2C4 111 aa6.83□□□□□ -1.32
TRIM39-202ENST00000376659 IGLV5-39A0A0G2JS06 123 aa6.83□□□□□ -1.32
TRIM39-202ENST00000376659 TMEM262E9PQX1 116 aa6.83□□□□□ -1.32
TRIM39-202ENST00000376659 ADAMTSL4-AS1Q5T5F5 129 aa6.83□□□□□ -1.32
TRIM39-202ENST00000376659 OR13C6PQ8NH95 151 aa6.83□□□□□ -1.32
TRIM39-202ENST00000376659 VSIG2Q96IQ7 327 aa6.83□□□□□ -1.32
TRIM39-202ENST00000376659 SFTA2Q6UW10 78 aa6.83□□□□□ -1.32
TRIM39-202ENST00000376659 LINC01006Q8NI28 216 aa6.83□□□□□ -1.32
TRIM39-202ENST00000376659 PPDPFLQ8WWR9 84 aa6.83□□□□□ -1.32
TRIM39-202ENST00000376659 HERVK_113P61574 105 aa6.83□□□□□ -1.32
TRIM39-202ENST00000376659 IGHV1-58A0A0C4DH39 117 aa6.82□□□□□ -1.32
TRIM39-202ENST00000376659 C9JAW5 83 aa6.82□□□□□ -1.32
TRIM39-202ENST00000376659 IGLV1-51P01701 117 aa6.82□□□□□ -1.32
TRIM39-202ENST00000376659 TMEM170BQ5T4T1 132 aa6.82□□□□□ -1.32
TRIM39-202ENST00000376659 IGHV3OR16-12A0A075B7B8 117 aa6.82□□□□□ -1.32
TRIM39-202ENST00000376659 CCL24O00175 119 aa6.82□□□□□ -1.32
TRIM39-202ENST00000376659 IGHV3-33P01772 117 aa6.82□□□□□ -1.32
TRIM39-202ENST00000376659 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.81□□□□□ -1.32
TRIM39-202ENST00000376659 IGKV2-29A2NJV5 120 aaPredicted RBP6.81□□□□□ -1.32
TRIM39-202ENST00000376659 TCL1BO95988 128 aa6.81□□□□□ -1.32
TRIM39-202ENST00000376659 COX6A2Q02221 97 aa6.81□□□□□ -1.32
TRIM39-202ENST00000376659 ATP6V0E2Q8NHE4 81 aa6.81□□□□□ -1.32
TRIM39-202ENST00000376659 TRAV8-3A0A0A6YYJ7 113 aa6.81□□□□□ -1.32
TRIM39-202ENST00000376659 DAZ2Q13117 558 aaKnown RBP6.81□□□□□ -1.32
TRIM39-202ENST00000376659 TIRAPP58753 221 aa6.81□□□□□ -1.32
TRIM39-202ENST00000376659 RNASE13Q5GAN3 156 aaKnown RBP6.8□□□□□ -1.32
TRIM39-202ENST00000376659 CARD19Q96LW7 228 aa6.8□□□□□ -1.32
TRIM39-202ENST00000376659 LOC107984156A0A0G2JMH3 177 aa6.8□□□□□ -1.32
TRIM39-202ENST00000376659 A8MZ25 164 aa6.8□□□□□ -1.32
TRIM39-202ENST00000376659 PSMB2P49721 201 aa6.8□□□□□ -1.32
TRIM39-202ENST00000376659 ARL17AQ8IVW1 177 aa6.8□□□□□ -1.32
TRIM39-202ENST00000376659 OVOL2Q9BRP0 275 aa6.8□□□□□ -1.32
TRIM39-202ENST00000376659 F8WDY8 70 aa6.8□□□□□ -1.32
TRIM39-202ENST00000376659 CRLF1O75462 422 aa6.8□□□□□ -1.32
TRIM39-202ENST00000376659 MUSTN1Q8IVN3 82 aa6.8□□□□□ -1.32
TRIM39-202ENST00000376659 LINC00612Q8N6U2 182 aa6.8□□□□□ -1.32
TRIM39-202ENST00000376659 J3KT08 172 aa6.79□□□□□ -1.32
TRIM39-202ENST00000376659 TIMM17BO60830 172 aa6.79□□□□□ -1.32
TRIM39-202ENST00000376659 NDUFA7O95182 113 aa6.79□□□□□ -1.32
TRIM39-202ENST00000376659 PLA2G2AP14555 144 aa6.79□□□□□ -1.32
TRIM39-202ENST00000376659 WFDC10AQ9H1F0 79 aa6.79□□□□□ -1.32
TRIM39-202ENST00000376659 SRSF9Q13242 221 aaKnown RBP eCLIP6.79□□□□□ -1.32
TRIM39-202ENST00000376659 LINC00242Q5T6M2 205 aa6.79□□□□□ -1.32
TRIM39-202ENST00000376659 SCGB1D4Q6XE38 83 aa6.79□□□□□ -1.32
TRIM39-202ENST00000376659 Q6ZTI0 123 aa6.79□□□□□ -1.32
TRIM39-202ENST00000376659 DYNLRB2Q8TF09 96 aa6.79□□□□□ -1.32
TRIM39-202ENST00000376659 TENM1Q9UKZ4 2725 aa6.79□□□□□ -1.32
TRIM39-202ENST00000376659 TMEM101Q96IK0 257 aa6.79□□□□□ -1.32
TRIM39-202ENST00000376659 LINC01587Q99440 93 aa6.79□□□□□ -1.32
TRIM39-202ENST00000376659 XCL2Q9UBD3 114 aa6.79□□□□□ -1.32
TRIM39-202ENST00000376659 NAV2Q8IVL1 2488 aa6.78□□□□□ -1.32
TRIM39-202ENST00000376659 K7EQD1 137 aa6.78□□□□□ -1.32
TRIM39-202ENST00000376659 MIAQ16674 131 aa6.78□□□□□ -1.32
TRIM39-202ENST00000376659 TEN1Q86WV5 123 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms