RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 IGIPA6NJ69 53 aa12.5□□□□□ -0.41
VARS-215ENST00000375663 ZNF561-AS1K7EIQ3 104 aa12.5□□□□□ -0.41
VARS-215ENST00000375663 TSHBP01222 138 aa12.5□□□□□ -0.41
VARS-215ENST00000375663 J3QKU1 62 aa12.49□□□□□ -0.41
VARS-215ENST00000375663 CRYGDP07320 174 aa12.49□□□□□ -0.41
VARS-215ENST00000375663 XGP55808 180 aa12.49□□□□□ -0.41
VARS-215ENST00000375663 Q9HAA7 133 aa12.49□□□□□ -0.41
VARS-215ENST00000375663 IGLV2-18A0A075B6J9 118 aa12.49□□□□□ -0.41
VARS-215ENST00000375663 GYPEP15421 78 aa12.49□□□□□ -0.41
VARS-215ENST00000375663 A8MZ25 164 aa12.48□□□□□ -0.41
VARS-215ENST00000375663 SPTBN5Q9NRC6 3674 aaKnown RBP12.48□□□□□ -0.41
VARS-215ENST00000375663 COX7A2LO14548 114 aa12.48□□□□□ -0.41
VARS-215ENST00000375663 DSCR8Q96T75 97 aa12.48□□□□□ -0.41
VARS-215ENST00000375663 UBE2D1P51668 147 aa12.48□□□□□ -0.41
VARS-215ENST00000375663 LINC00643Q86TS7 51 aa12.47□□□□□ -0.41
VARS-215ENST00000375663 PYGO1Q9Y3Y4 419 aa12.47□□□□□ -0.41
VARS-215ENST00000375663 USP34Q70CQ2 3546 aa12.47□□□□□ -0.41
VARS-215ENST00000375663 F8P00451 2351 aa12.47□□□□□ -0.41
VARS-215ENST00000375663 IGLV10-54A0A075B6I4 117 aa12.46□□□□□ -0.41
VARS-215ENST00000375663 Q6ZTI0 123 aa12.46□□□□□ -0.41
VARS-215ENST00000375663 A0A1B0GX51 115 aa12.46□□□□□ -0.41
VARS-215ENST00000375663 TRAV25A0A0B4J276 109 aa12.46□□□□□ -0.42
VARS-215ENST00000375663 ATOX1O00244 68 aa12.46□□□□□ -0.42
VARS-215ENST00000375663 LINC00308Q8TCZ7 52 aa12.46□□□□□ -0.42
VARS-215ENST00000375663 USP24Q9UPU5 2620 aa12.46□□□□□ -0.42
VARS-215ENST00000375663 C9orf85Q96MD7 179 aa12.46□□□□□ -0.42
VARS-215ENST00000375663 DEFB113Q30KQ7 82 aa12.45□□□□□ -0.42
VARS-215ENST00000375663 DCANP1Q8TF63 244 aa12.45□□□□□ -0.42
VARS-215ENST00000375663 TMEM263Q8WUH6 116 aaKnown RBP12.45□□□□□ -0.42
VARS-215ENST00000375663 HIST2H2BDQ6DRA6 164 aa12.45□□□□□ -0.42
VARS-215ENST00000375663 C4orf3Q8WVX3 66 aa12.44□□□□□ -0.42
VARS-215ENST00000375663 PSMB8P28062 276 aa12.44□□□□□ -0.42
VARS-215ENST00000375663 IGLV4-69A0A075B6H9 119 aa12.42□□□□□ -0.42
VARS-215ENST00000375663 NDUFA1O15239 70 aa12.42□□□□□ -0.42
VARS-215ENST00000375663 TIRAPP58753 221 aa12.42□□□□□ -0.42
VARS-215ENST00000375663 SPANXCQ9NY87 97 aa12.42□□□□□ -0.42
VARS-215ENST00000375663 CFAP54Q96N23 3096 aa12.41□□□□□ -0.42
VARS-215ENST00000375663 ATP5G1P05496 136 aa12.41□□□□□ -0.42
VARS-215ENST00000375663 RBMY1FQ15415 496 aaKnown RBP12.41□□□□□ -0.42
VARS-215ENST00000375663 PRM2P04554 102 aa12.41□□□□□ -0.42
VARS-215ENST00000375663 IGLV1-40P01703 118 aa12.41□□□□□ -0.42
VARS-215ENST00000375663 PIK3CD-AS1Q5SR53 167 aa12.41□□□□□ -0.42
VARS-215ENST00000375663 C14orf132Q9NPU4 83 aa12.41□□□□□ -0.42
VARS-215ENST00000375663 APOC4P55056 127 aa12.41□□□□□ -0.42
VARS-215ENST00000375663 TSPEAR-AS2P59090 65 aa12.41□□□□□ -0.42
VARS-215ENST00000375663 VPS13AQ96RL7 3174 aa12.4□□□□□ -0.42
VARS-215ENST00000375663 MRPL23Q16540 153 aaKnown RBP12.4□□□□□ -0.42
VARS-215ENST00000375663 DEFB114Q30KQ6 69 aa12.4□□□□□ -0.42
VARS-215ENST00000375663 ESM1Q9NQ30 184 aa12.4□□□□□ -0.42
VARS-215ENST00000375663 UBE2D3P61077 147 aa12.4□□□□□ -0.43
VARS-215ENST00000375663 UBE2D2P62837 147 aa12.4□□□□□ -0.43
VARS-215ENST00000375663 EDN2P20800 178 aa12.39□□□□□ -0.43
VARS-215ENST00000375663 LST1O00453 97 aa12.38□□□□□ -0.43
VARS-215ENST00000375663 ATRQ13535 2644 aa12.38□□□□□ -0.43
VARS-215ENST00000375663 CITED2Q99967 270 aaPredicted RBP12.38□□□□□ -0.43
VARS-215ENST00000375663 JMJD7-PLA2G4BH0Y9G9 81 aa12.38□□□□□ -0.43
VARS-215ENST00000375663 MRPS36P82909 103 aaKnown RBP12.37□□□□□ -0.43
VARS-215ENST00000375663 A0A1W2PPR1 153 aa12.37□□□□□ -0.43
VARS-215ENST00000375663 TIMM17BO60830 172 aa12.37□□□□□ -0.43
VARS-215ENST00000375663 UBE2D4Q9Y2X8 147 aa12.37□□□□□ -0.43
VARS-215ENST00000375663 CELSR3Q9NYQ7 3312 aa12.36□□□□□ -0.43
VARS-215ENST00000375663 Q6YL49 198 aa12.36□□□□□ -0.43
VARS-215ENST00000375663 NKAPP1Q8N9T2 125 aa12.36□□□□□ -0.43
VARS-215ENST00000375663 CITED1Q99966 193 aa12.36□□□□□ -0.43
VARS-215ENST00000375663 CENPEQ02224 2701 aa12.36□□□□□ -0.43
VARS-215ENST00000375663 CRIP2P52943 208 aaPredicted RBP12.36□□□□□ -0.43
VARS-215ENST00000375663 POM121L12Q8N7R1 296 aa12.36□□□□□ -0.43
VARS-215ENST00000375663 UBE2DNLQ8IWF7 75 aa12.35□□□□□ -0.43
VARS-215ENST00000375663 H7C423 109 aa12.34□□□□□ -0.43
VARS-215ENST00000375663 F8WEM9 126 aa12.33□□□□□ -0.44
VARS-215ENST00000375663 CLUHP3Q96NS8 147 aa12.32□□□□□ -0.44
VARS-215ENST00000375663 NCR3O14931 201 aa12.32□□□□□ -0.44
VARS-215ENST00000375663 AVPP01185 164 aa12.32□□□□□ -0.44
VARS-215ENST00000375663 ZNF580Q9UK33 172 aa12.32□□□□□ -0.44
VARS-215ENST00000375663 PRO0255Q9UI72 69 aa12.31□□□□□ -0.44
VARS-215ENST00000375663 J3KT08 172 aa12.31□□□□□ -0.44
VARS-215ENST00000375663 PCSK5Q92824 1860 aa12.31□□□□□ -0.44
VARS-215ENST00000375663 TMEM256-PLSCR3K7ERE1 68 aa12.31□□□□□ -0.44
VARS-215ENST00000375663 CXCL5P42830 114 aa12.31□□□□□ -0.44
VARS-215ENST00000375663 SDIM1Q6ZPB5 146 aa12.31□□□□□ -0.44
VARS-215ENST00000375663 MAST4O15021 2626 aa12.31□□□□□ -0.44
VARS-215ENST00000375663 LINC01546A6NGU7 62 aa12.3□□□□□ -0.44
VARS-215ENST00000375663 UQCRQO14949 82 aa12.3□□□□□ -0.44
VARS-215ENST00000375663 DEFB4AO15263 64 aa12.3□□□□□ -0.44
VARS-215ENST00000375663 MRAPQ8TCY5 172 aa12.3□□□□□ -0.44
VARS-215ENST00000375663 SPAG11BQ08648 103 aa12.3□□□□□ -0.44
VARS-215ENST00000375663 PSCAO43653 123 aa12.29□□□□□ -0.44
VARS-215ENST00000375663 IBA57-AS1B1ANH7 110 aa12.29□□□□□ -0.44
VARS-215ENST00000375663 CCDC179H3BU77 68 aa12.29□□□□□ -0.44
VARS-215ENST00000375663 IGHV4-31P0DP07 118 aa12.29□□□□□ -0.44
VARS-215ENST00000375663 RBM3P98179 157 aaKnown RBP12.29□□□□□ -0.44
VARS-215ENST00000375663 C18orf65Q6ZTR6 163 aa12.29□□□□□ -0.44
VARS-215ENST00000375663 CAMK2N2Q96S95 79 aa12.29□□□□□ -0.44
VARS-215ENST00000375663 ZNF702PQ9H963 129 aa12.29□□□□□ -0.44
VARS-215ENST00000375663 DNAJC9-AS1A6NH13 148 aa12.28□□□□□ -0.44
VARS-215ENST00000375663 SLPIP03973 132 aa12.28□□□□□ -0.44
VARS-215ENST00000375663 Q6ZSV7 163 aa12.28□□□□□ -0.44
VARS-215ENST00000375663 DEFB135Q30KP9 77 aa12.28□□□□□ -0.44
VARS-215ENST00000375663 PRORYQ9H606 182 aa12.28□□□□□ -0.44
VARS-215ENST00000375663 hADV29S1A0JD25 119 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms