RNA–Protein interactions for RNA: ENST00000375429.7

NELFE-202, Transcript of negative elongation factor complex member E, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NELFE, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-202ENST00000375429 CDC42SE2Q9NRR3 84 aa13.94□□□□□ -0.18
NELFE-202ENST00000375429 PYGO1Q9Y3Y4 419 aa13.94□□□□□ -0.18
NELFE-202ENST00000375429 DNAH6Q9C0G6 4158 aa13.94□□□□□ -0.18
NELFE-202ENST00000375429 TRAV9-2A0A087WT02 112 aa13.93□□□□□ -0.18
NELFE-202ENST00000375429 NBDYA0A0U1RRE5 68 aa13.93□□□□□ -0.18
NELFE-202ENST00000375429 SACSQ9NZJ4 4579 aa13.93□□□□□ -0.18
NELFE-202ENST00000375429 M0R2N4 97 aa13.92□□□□□ -0.18
NELFE-202ENST00000375429 SCGB3A1Q96QR1 104 aa13.92□□□□□ -0.18
NELFE-202ENST00000375429 LINC01549A6NIU2 74 aa13.92□□□□□ -0.18
NELFE-202ENST00000375429 K7EP13 123 aa13.92□□□□□ -0.18
NELFE-202ENST00000375429 PDZD11Q5EBL8 140 aa13.92□□□□□ -0.18
NELFE-202ENST00000375429 Q6ZUT4 128 aa13.92□□□□□ -0.18
NELFE-202ENST00000375429 ERASQ7Z444 233 aa13.92□□□□□ -0.18
NELFE-202ENST00000375429 LINC00269Q8N2A0 174 aa13.92□□□□□ -0.18
NELFE-202ENST00000375429 ZNF664Q8N3J9 261 aa13.92□□□□□ -0.18
NELFE-202ENST00000375429 HYDINQ4G0P3 5121 aa13.91□□□□□ -0.18
NELFE-202ENST00000375429 IBA57-AS1B1ANH7 110 aa13.91□□□□□ -0.18
NELFE-202ENST00000375429 RNASE13Q5GAN3 156 aaKnown RBP13.91□□□□□ -0.18
NELFE-202ENST00000375429 C10orf126Q8N4M7 172 aa13.91□□□□□ -0.18
NELFE-202ENST00000375429 IGLV4-3A0A075B6K6 122 aa13.9□□□□□ -0.18
NELFE-202ENST00000375429 MRPS36P82909 103 aaKnown RBP13.9□□□□□ -0.18
NELFE-202ENST00000375429 CLPSL2Q6UWE3 100 aa13.9□□□□□ -0.18
NELFE-202ENST00000375429 ENHOQ6UWT2 76 aa13.9□□□□□ -0.18
NELFE-202ENST00000375429 TIMM17AQ99595 171 aa13.9□□□□□ -0.18
NELFE-202ENST00000375429 TTC32Q5I0X7 151 aa13.89□□□□□ -0.19
NELFE-202ENST00000375429 Q6ZR54 194 aa13.89□□□□□ -0.19
NELFE-202ENST00000375429 UBE2WQ96B02 151 aa13.88□□□□□ -0.19
NELFE-202ENST00000375429 PRR34Q9NV39 138 aa13.88□□□□□ -0.19
NELFE-202ENST00000375429 S100A6P06703 90 aa13.88□□□□□ -0.19
NELFE-202ENST00000375429 REG3AQ06141 175 aa13.88□□□□□ -0.19
NELFE-202ENST00000375429 TMEM141Q96I45 108 aa13.88□□□□□ -0.19
NELFE-202ENST00000375429 NPSP0C0P6 89 aa13.87□□□□□ -0.19
NELFE-202ENST00000375429 ZC2HC1BQ5TFG8 222 aa13.87□□□□□ -0.19
NELFE-202ENST00000375429 IGKV3OR2-268A0A0C4DH90 116 aa13.86□□□□□ -0.19
NELFE-202ENST00000375429 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.86□□□□□ -0.19
NELFE-202ENST00000375429 LINC00173Q6ZV60 143 aa13.86□□□□□ -0.19
NELFE-202ENST00000375429 LEPROTL1O95214 131 aa13.85□□□□□ -0.19
NELFE-202ENST00000375429 FABP4P15090 132 aa13.85□□□□□ -0.19
NELFE-202ENST00000375429 ATP5LO75964 103 aa13.84□□□□□ -0.19
NELFE-202ENST00000375429 CRPP02741 224 aa13.84□□□□□ -0.19
NELFE-202ENST00000375429 AMELXQ99217 191 aa13.84□□□□□ -0.19
NELFE-202ENST00000375429 VCX2Q9H322 139 aa13.84□□□□□ -0.19
NELFE-202ENST00000375429 Q9HAA7 133 aa13.84□□□□□ -0.19
NELFE-202ENST00000375429 SNRPEP62304 92 aaKnown RBP13.83□□□□□ -0.19
NELFE-202ENST00000375429 Q6ZN92 141 aa13.83□□□□□ -0.19
NELFE-202ENST00000375429 BAALCQ8WXS3 180 aa13.83□□□□□ -0.19
NELFE-202ENST00000375429 TMA7Q9Y2S6 64 aaKnown RBP13.83□□□□□ -0.19
NELFE-202ENST00000375429 TRAV8-3A0A0A6YYJ7 113 aa13.83□□□□□ -0.2
NELFE-202ENST00000375429 TEX43Q6ZNM6 134 aa13.83□□□□□ -0.2
NELFE-202ENST00000375429 IFI27L1Q96BM0 104 aa13.83□□□□□ -0.2
NELFE-202ENST00000375429 KMT2CQ8NEZ4 4911 aaKnown RBP13.83□□□□□ -0.2
NELFE-202ENST00000375429 LINC00959A0A1B0GUT2 108 aa13.82□□□□□ -0.2
NELFE-202ENST00000375429 MIAQ16674 131 aa13.82□□□□□ -0.2
NELFE-202ENST00000375429 PAPPA-AS1Q5QFB9 102 aa13.82□□□□□ -0.2
NELFE-202ENST00000375429 HIST3H2BBQ8N257 126 aa13.82□□□□□ -0.2
NELFE-202ENST00000375429 TRAV13-1A0A0B4J241 112 aa13.81□□□□□ -0.2
NELFE-202ENST00000375429 C5orf52A6NGY3 159 aa13.81□□□□□ -0.2
NELFE-202ENST00000375429 IGLV10-54A0A075B6I4 117 aa13.8□□□□□ -0.2
NELFE-202ENST00000375429 HSPB8Q9UJY1 196 aa13.8□□□□□ -0.2
NELFE-202ENST00000375429 IFITM10A6NMD0 228 aa13.79□□□□□ -0.2
NELFE-202ENST00000375429 PRSS29PA6NIE9 313 aa13.79□□□□□ -0.2
NELFE-202ENST00000375429 PMVKQ15126 192 aa13.79□□□□□ -0.2
NELFE-202ENST00000375429 CST9LQ9H4G1 147 aa13.79□□□□□ -0.2
NELFE-202ENST00000375429 IGKV2D-24A0A075B6R9 120 aa13.78□□□□□ -0.2
NELFE-202ENST00000375429 TRAV8-4A0A0B4J246 113 aa13.78□□□□□ -0.2
NELFE-202ENST00000375429 PRSS1P07477 247 aa13.78□□□□□ -0.2
NELFE-202ENST00000375429 C6orf223Q8N319 242 aa13.78□□□□□ -0.2
NELFE-202ENST00000375429 PACRGQ96M98 296 aaPredicted RBP13.78□□□□□ -0.2
NELFE-202ENST00000375429 C2orf88Q9BSF0 95 aa13.78□□□□□ -0.2
NELFE-202ENST00000375429 UBE2D1P51668 147 aa13.77□□□□□ -0.21
NELFE-202ENST00000375429 SS18Q15532 418 aa13.77□□□□□ -0.21
NELFE-202ENST00000375429 KRTAP26-1Q6PEX3 210 aa13.77□□□□□ -0.21
NELFE-202ENST00000375429 C1orf43Q9BWL3 253 aa13.77□□□□□ -0.21
NELFE-202ENST00000375429 RYR2Q92736 4967 aa13.76□□□□□ -0.21
NELFE-202ENST00000375429 C1orf134Q5TEV5 83 aa13.76□□□□□ -0.21
NELFE-202ENST00000375429 CHCHD10Q8WYQ3 142 aaPredicted RBP13.76□□□□□ -0.21
NELFE-202ENST00000375429 CCL25O15444 150 aa13.75□□□□□ -0.21
NELFE-202ENST00000375429 S100A2P29034 98 aa13.75□□□□□ -0.21
NELFE-202ENST00000375429 Q6ZRN7 208 aaPredicted RBP13.75□□□□□ -0.21
NELFE-202ENST00000375429 NFE4Q86UQ8 179 aa13.75□□□□□ -0.21
NELFE-202ENST00000375429 HIST1H2BLQ99880 126 aa13.75□□□□□ -0.21
NELFE-202ENST00000375429 RMI2Q96E14 147 aa13.75□□□□□ -0.21
NELFE-202ENST00000375429 DNAH2Q9P225 4427 aa13.74□□□□□ -0.21
NELFE-202ENST00000375429 XCL1P47992 114 aa13.74□□□□□ -0.21
NELFE-202ENST00000375429 LINC00242Q5T6M2 205 aa13.74□□□□□ -0.21
NELFE-202ENST00000375429 DNAH10Q8IVF4 4471 aa13.74□□□□□ -0.21
NELFE-202ENST00000375429 A0A0J9YXV3 536 aa13.73□□□□□ -0.21
NELFE-202ENST00000375429 H0Y8G0 127 aa13.73□□□□□ -0.21
NELFE-202ENST00000375429 MAP1LC3CQ9BXW4 147 aa13.73□□□□□ -0.21
NELFE-202ENST00000375429 TRAV12-1A0A0B4J245 112 aa13.72□□□□□ -0.21
NELFE-202ENST00000375429 GAGE12HA6NDE8 117 aa13.72□□□□□ -0.21
NELFE-202ENST00000375429 COX6A2Q02221 97 aa13.72□□□□□ -0.21
NELFE-202ENST00000375429 FAM19A3Q7Z5A8 133 aa13.72□□□□□ -0.21
NELFE-202ENST00000375429 MAPKAPK5-AS1Q8N8E1 139 aa13.72□□□□□ -0.21
NELFE-202ENST00000375429 TM2D2Q9BX73 214 aa13.72□□□□□ -0.21
NELFE-202ENST00000375429 COX11Q9Y6N1 276 aa13.71□□□□□ -0.21
NELFE-202ENST00000375429 C3orf79P0CE67 100 aa13.71□□□□□ -0.22
NELFE-202ENST00000375429 FOXI1Q12951 378 aa13.71□□□□□ -0.22
NELFE-202ENST00000375429 CD164L2Q6UWJ8 174 aa13.71□□□□□ -0.22
NELFE-202ENST00000375429 CHTOPQ9Y3Y2 248 aaKnown RBP13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms