RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 LOC100131303A0A0U1RQF7 123 aa4.83□□□□□ -1.64
SMC1A-202ENST00000375340 DEFB121Q5J5C9 76 aa4.83□□□□□ -1.64
SMC1A-202ENST00000375340 ODF3Q96PU9 254 aa4.83□□□□□ -1.64
SMC1A-202ENST00000375340 PRORYQ9H606 182 aa4.83□□□□□ -1.64
SMC1A-202ENST00000375340 COX7A2LO14548 114 aa4.83□□□□□ -1.64
SMC1A-202ENST00000375340 CNFNQ9BYD5 112 aa4.83□□□□□ -1.64
SMC1A-202ENST00000375340 IGHV4-31P0DP07 118 aa4.83□□□□□ -1.64
SMC1A-202ENST00000375340 IGHV4-28A0A0C4DH34 117 aa4.83□□□□□ -1.64
SMC1A-202ENST00000375340 MTORP42345 2549 aa4.83□□□□□ -1.64
SMC1A-202ENST00000375340 DCANP1Q8TF63 244 aa4.83□□□□□ -1.64
SMC1A-202ENST00000375340 PSMG3-AS1Q96PY0 264 aa4.83□□□□□ -1.64
SMC1A-202ENST00000375340 Q6YL49 198 aa4.83□□□□□ -1.64
SMC1A-202ENST00000375340 WFDC10AQ9H1F0 79 aa4.83□□□□□ -1.64
SMC1A-202ENST00000375340 NDUFA1O15239 70 aa4.83□□□□□ -1.64
SMC1A-202ENST00000375340 PSMB8P28062 276 aa4.83□□□□□ -1.64
SMC1A-202ENST00000375340 DEFB135Q30KP9 77 aa4.83□□□□□ -1.64
SMC1A-202ENST00000375340 IGLV2-18A0A075B6J9 118 aa4.82□□□□□ -1.64
SMC1A-202ENST00000375340 C9orf85Q96MD7 179 aa4.82□□□□□ -1.64
SMC1A-202ENST00000375340 H3BT86 120 aa4.82□□□□□ -1.64
SMC1A-202ENST00000375340 LINC00308Q8TCZ7 52 aa4.82□□□□□ -1.64
SMC1A-202ENST00000375340 PKD1L2Q7Z442 2459 aa4.82□□□□□ -1.64
SMC1A-202ENST00000375340 KLLNB2CW77 178 aa4.82□□□□□ -1.64
SMC1A-202ENST00000375340 GHRHP01286 108 aa4.82□□□□□ -1.64
SMC1A-202ENST00000375340 UBE2D4Q9Y2X8 147 aa4.82□□□□□ -1.64
SMC1A-202ENST00000375340 F8WEM9 126 aa4.82□□□□□ -1.64
SMC1A-202ENST00000375340 H7C423 109 aa4.82□□□□□ -1.64
SMC1A-202ENST00000375340 PSCAO43653 123 aa4.82□□□□□ -1.64
SMC1A-202ENST00000375340 IGKV2D-24A0A075B6R9 120 aa4.82□□□□□ -1.64
SMC1A-202ENST00000375340 ZNF702PQ9H963 129 aa4.82□□□□□ -1.64
SMC1A-202ENST00000375340 NDUFA7O95182 113 aa4.82□□□□□ -1.64
SMC1A-202ENST00000375340 PRB2P02812 416 aaPredicted RBP4.82□□□□□ -1.64
SMC1A-202ENST00000375340 JMJD1CQ15652 2540 aa4.82□□□□□ -1.64
SMC1A-202ENST00000375340 TRBV27A0A0K0K1C4 114 aa4.81□□□□□ -1.64
SMC1A-202ENST00000375340 IGIPA6NJ69 53 aa4.81□□□□□ -1.64
SMC1A-202ENST00000375340 CLUHP3Q96NS8 147 aa4.81□□□□□ -1.64
SMC1A-202ENST00000375340 SPANXDQ9BXN6 97 aa4.81□□□□□ -1.64
SMC1A-202ENST00000375340 SPANXCQ9NY87 97 aa4.81□□□□□ -1.64
SMC1A-202ENST00000375340 TRBV30A0A0K0K1B3 111 aa4.81□□□□□ -1.64
SMC1A-202ENST00000375340 COX6A2Q02221 97 aa4.81□□□□□ -1.64
SMC1A-202ENST00000375340 CRYGDP07320 174 aa4.81□□□□□ -1.64
SMC1A-202ENST00000375340 CHD7Q9P2D1 2997 aa4.81□□□□□ -1.64
SMC1A-202ENST00000375340 TMEM89A2RUT3 159 aa4.81□□□□□ -1.64
SMC1A-202ENST00000375340 hADV29S1A0JD25 119 aa4.81□□□□□ -1.64
SMC1A-202ENST00000375340 IGLV1-40P01703 118 aa4.81□□□□□ -1.64
SMC1A-202ENST00000375340 DEFB114Q30KQ6 69 aa4.81□□□□□ -1.64
SMC1A-202ENST00000375340 LINC00269Q8N2A0 174 aa4.8□□□□□ -1.64
SMC1A-202ENST00000375340 CENPEQ02224 2701 aa4.8□□□□□ -1.64
SMC1A-202ENST00000375340 AVPP01185 164 aa4.8□□□□□ -1.64
SMC1A-202ENST00000375340 POLR2KP53803 58 aaKnown RBP4.8□□□□□ -1.64
SMC1A-202ENST00000375340 TRAV23DV6A0A075B6W5 121 aa4.8□□□□□ -1.64
SMC1A-202ENST00000375340 UBE2D1P51668 147 aa4.8□□□□□ -1.64
SMC1A-202ENST00000375340 ADAMTSL4-AS1Q5T5F5 129 aa4.8□□□□□ -1.64
SMC1A-202ENST00000375340 A0A1W2PPR1 153 aa4.79□□□□□ -1.64
SMC1A-202ENST00000375340 H0YGX0 51 aa4.79□□□□□ -1.64
SMC1A-202ENST00000375340 Q6ZSN1 163 aa4.79□□□□□ -1.64
SMC1A-202ENST00000375340 ATOX1O00244 68 aa4.79□□□□□ -1.64
SMC1A-202ENST00000375340 POM121L12Q8N7R1 296 aa4.79□□□□□ -1.64
SMC1A-202ENST00000375340 WFDC9Q8NEX5 89 aa4.79□□□□□ -1.64
SMC1A-202ENST00000375340 LINC01546A6NGU7 62 aa4.79□□□□□ -1.64
SMC1A-202ENST00000375340 CAMK2N2Q96S95 79 aa4.79□□□□□ -1.64
SMC1A-202ENST00000375340 PRRC2AP48634 2157 aaKnown RBP4.79□□□□□ -1.64
SMC1A-202ENST00000375340 TRBV6-5A0A0K0K1A5 114 aa4.78□□□□□ -1.64
SMC1A-202ENST00000375340 J3KT08 172 aa4.78□□□□□ -1.64
SMC1A-202ENST00000375340 HIGD2BQ4VC39 106 aa4.78□□□□□ -1.64
SMC1A-202ENST00000375340 UPK3BQ9BT76 320 aa4.78□□□□□ -1.64
SMC1A-202ENST00000375340 CHCHD7Q9BUK0 85 aa4.78□□□□□ -1.64
SMC1A-202ENST00000375340 SCXQ7RTU7 201 aa4.78□□□□□ -1.64
SMC1A-202ENST00000375340 CDH23Q9H251 3354 aa4.78□□□□□ -1.64
SMC1A-202ENST00000375340 KLK12Q9UKR0 248 aa4.77□□□□□ -1.65
SMC1A-202ENST00000375340 C9orf66Q5T8R8 295 aa4.77□□□□□ -1.65
SMC1A-202ENST00000375340 ENHOQ6UWT2 76 aa4.77□□□□□ -1.65
SMC1A-202ENST00000375340 LINC00526Q96FQ7 95 aa4.77□□□□□ -1.65
SMC1A-202ENST00000375340 FN1P02751 2386 aaKnown RBP4.77□□□□□ -1.65
SMC1A-202ENST00000375340 C3orf22Q8N5N4 141 aa4.77□□□□□ -1.65
SMC1A-202ENST00000375340 SPTBN5Q9NRC6 3674 aaKnown RBP4.77□□□□□ -1.65
SMC1A-202ENST00000375340 SPAG11BQ08648 103 aa4.77□□□□□ -1.65
SMC1A-202ENST00000375340 CXCL5P42830 114 aa4.77□□□□□ -1.65
SMC1A-202ENST00000375340 LINC00482Q8N8I6 264 aa4.77□□□□□ -1.65
SMC1A-202ENST00000375340 LST1O00453 97 aa4.77□□□□□ -1.65
SMC1A-202ENST00000375340 CHCHD10Q8WYQ3 142 aaPredicted RBP4.77□□□□□ -1.65
SMC1A-202ENST00000375340 COX8CQ7Z4L0 72 aa4.76□□□□□ -1.65
SMC1A-202ENST00000375340 PYGO1Q9Y3Y4 419 aa4.76□□□□□ -1.65
SMC1A-202ENST00000375340 LAMA3Q16787 3333 aa4.76□□□□□ -1.65
SMC1A-202ENST00000375340 MRPS36P82909 103 aaKnown RBP4.76□□□□□ -1.65
SMC1A-202ENST00000375340 RBM3P98179 157 aaKnown RBP4.76□□□□□ -1.65
SMC1A-202ENST00000375340 LINC00643Q86TS7 51 aa4.76□□□□□ -1.65
SMC1A-202ENST00000375340 REG3AQ06141 175 aa4.76□□□□□ -1.65
SMC1A-202ENST00000375340 TRBV10-1A0A0K0K1A3 114 aa4.76□□□□□ -1.65
SMC1A-202ENST00000375340 LINC00694P0DN24 101 aa4.76□□□□□ -1.65
SMC1A-202ENST00000375340 SMIM11BQ8TCY0 68 aa4.76□□□□□ -1.65
SMC1A-202ENST00000375340 TIRAPP58753 221 aa4.76□□□□□ -1.65
SMC1A-202ENST00000375340 UBE2D3P61077 147 aa4.76□□□□□ -1.65
SMC1A-202ENST00000375340 UBE2D2P62837 147 aa4.76□□□□□ -1.65
SMC1A-202ENST00000375340 A0A087WYN8 130 aa4.75□□□□□ -1.65
SMC1A-202ENST00000375340 UBE2BP63146 152 aa4.75□□□□□ -1.65
SMC1A-202ENST00000375340 CDK2AP2O75956 126 aa4.75□□□□□ -1.65
SMC1A-202ENST00000375340 FAM222AQ5U5X8 452 aa4.75□□□□□ -1.65
SMC1A-202ENST00000375340 TRBV6-8A0A0A6YYG3 113 aa4.75□□□□□ -1.65
SMC1A-202ENST00000375340 TMEM256-PLSCR3K7ERE1 68 aa4.75□□□□□ -1.65
SMC1A-202ENST00000375340 SPART-AS1P0CW21 52 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms