RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 IGIPA6NJ69 53 aa13.28□□□□□ -0.28
RXRB-202ENST00000374685 HILS1P60008 231 aa13.28□□□□□ -0.28
RXRB-202ENST00000374685 ARL17AQ8IVW1 177 aa13.28□□□□□ -0.28
RXRB-202ENST00000374685 TRBV20-1A0A075B6N2 111 aa13.27□□□□□ -0.29
RXRB-202ENST00000374685 TRAV2A0A0B4J234 112 aa13.27□□□□□ -0.29
RXRB-202ENST00000374685 PRADC1Q9BSG0 188 aa13.27□□□□□ -0.29
RXRB-202ENST00000374685 I3L3M4 83 aa13.26□□□□□ -0.29
RXRB-202ENST00000374685 INAFM1C9JVW0 142 aa13.26□□□□□ -0.29
RXRB-202ENST00000374685 IFITM1P13164 125 aa13.26□□□□□ -0.29
RXRB-202ENST00000374685 C1orf158Q8N1D5 194 aa13.26□□□□□ -0.29
RXRB-202ENST00000374685 ANKRD29Q8N6D5 301 aa13.26□□□□□ -0.29
RXRB-202ENST00000374685 TRBV6-5A0A0K0K1A5 114 aa13.26□□□□□ -0.29
RXRB-202ENST00000374685 PMVKQ15126 192 aa13.26□□□□□ -0.29
RXRB-202ENST00000374685 C11orf72Q8NBR9 251 aa13.26□□□□□ -0.29
RXRB-202ENST00000374685 TCL1BO95988 128 aa13.25□□□□□ -0.29
RXRB-202ENST00000374685 TTC32Q5I0X7 151 aa13.25□□□□□ -0.29
RXRB-202ENST00000374685 M0QXV9 152 aa13.24□□□□□ -0.29
RXRB-202ENST00000374685 SNCGO76070 127 aa13.24□□□□□ -0.29
RXRB-202ENST00000374685 A8MTW9 85 aa13.24□□□□□ -0.29
RXRB-202ENST00000374685 SCGB1D4Q6XE38 83 aa13.24□□□□□ -0.29
RXRB-202ENST00000374685 IGLV4-69A0A075B6H9 119 aa13.23□□□□□ -0.29
RXRB-202ENST00000374685 TRAV4A0A0B4J268 109 aa13.23□□□□□ -0.29
RXRB-202ENST00000374685 ZNF815PA8K554 130 aa13.23□□□□□ -0.29
RXRB-202ENST00000374685 PF4P02776 101 aa13.23□□□□□ -0.29
RXRB-202ENST00000374685 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.22□□□□□ -0.29
RXRB-202ENST00000374685 IGKV2-29A2NJV5 120 aaPredicted RBP13.22□□□□□ -0.29
RXRB-202ENST00000374685 ZNRF2Q8NHG8 242 aa13.22□□□□□ -0.29
RXRB-202ENST00000374685 C16orf95Q9H693 158 aa13.22□□□□□ -0.29
RXRB-202ENST00000374685 KRTAP10-3P60369 221 aa13.22□□□□□ -0.29
RXRB-202ENST00000374685 Q6ZTI0 123 aa13.22□□□□□ -0.29
RXRB-202ENST00000374685 C20orf203Q8NBC4 194 aa13.22□□□□□ -0.29
RXRB-202ENST00000374685 TRAV25A0A0B4J276 109 aa13.21□□□□□ -0.29
RXRB-202ENST00000374685 ADARB2-AS1A8MUL3 147 aa13.21□□□□□ -0.29
RXRB-202ENST00000374685 SFTA2Q6UW10 78 aa13.21□□□□□ -0.29
RXRB-202ENST00000374685 NOP10Q9NPE3 64 aaKnown RBP13.21□□□□□ -0.3
RXRB-202ENST00000374685 PLEKHB2Q96CS7 222 aa13.2□□□□□ -0.3
RXRB-202ENST00000374685 TMEM141Q96I45 108 aa13.2□□□□□ -0.3
RXRB-202ENST00000374685 TIMM17AQ99595 171 aa13.2□□□□□ -0.3
RXRB-202ENST00000374685 CRLF1O75462 422 aa13.2□□□□□ -0.3
RXRB-202ENST00000374685 A0A0J9YXV3 536 aa13.19□□□□□ -0.3
RXRB-202ENST00000374685 NDUFA11Q86Y39 141 aa13.19□□□□□ -0.3
RXRB-202ENST00000374685 SCGB1C2P0DMR2 95 aa13.19□□□□□ -0.3
RXRB-202ENST00000374685 RHOHQ15669 191 aa13.18□□□□□ -0.3
RXRB-202ENST00000374685 TEP1Q99973 2627 aaKnown RBP13.18□□□□□ -0.3
RXRB-202ENST00000374685 SPATA3Q8NHX4 192 aa13.17□□□□□ -0.3
RXRB-202ENST00000374685 F8P00451 2351 aa13.17□□□□□ -0.3
RXRB-202ENST00000374685 IGLV4-3A0A075B6K6 122 aa13.17□□□□□ -0.3
RXRB-202ENST00000374685 IGLV1-51P01701 117 aa13.17□□□□□ -0.3
RXRB-202ENST00000374685 TRRAPQ9Y4A5 3859 aa13.17□□□□□ -0.3
RXRB-202ENST00000374685 TSPEAR-AS2P59090 65 aa13.17□□□□□ -0.3
RXRB-202ENST00000374685 SPXQ9BT56 116 aa13.17□□□□□ -0.3
RXRB-202ENST00000374685 SRSF9Q13242 221 aaKnown RBP eCLIP13.16□□□□□ -0.31e-7■□□□□ 10.6
RXRB-202ENST00000374685 SLC25A20O43772 301 aa13.16□□□□□ -0.3
RXRB-202ENST00000374685 HERVK_113P61574 105 aa13.16□□□□□ -0.3
RXRB-202ENST00000374685 GIG44P09565 113 aaPredicted RBP13.15□□□□□ -0.3
RXRB-202ENST00000374685 MEIG1Q5JSS6 88 aa13.15□□□□□ -0.3
RXRB-202ENST00000374685 LINC00467Q9BRT7 94 aa13.15□□□□□ -0.3
RXRB-202ENST00000374685 TMEM126AQ9H061 195 aa13.15□□□□□ -0.3
RXRB-202ENST00000374685 TRGV2A0A075B6R0 118 aa13.14□□□□□ -0.31
RXRB-202ENST00000374685 C10orf126Q8N4M7 172 aa13.13□□□□□ -0.31
RXRB-202ENST00000374685 RS1O15537 224 aa13.12□□□□□ -0.31
RXRB-202ENST00000374685 LINC01600Q96MT4 127 aa13.12□□□□□ -0.31
RXRB-202ENST00000374685 TMEM263Q8WUH6 116 aaKnown RBP13.12□□□□□ -0.31
RXRB-202ENST00000374685 C19orf73Q9NVV2 129 aa13.12□□□□□ -0.31
RXRB-202ENST00000374685 CFC1BP0CG36 223 aa13.11□□□□□ -0.31
RXRB-202ENST00000374685 CFC1P0CG37 223 aa13.11□□□□□ -0.31
RXRB-202ENST00000374685 BEAN1Q3B7T3 259 aa13.11□□□□□ -0.31
RXRB-202ENST00000374685 PAPPA-AS1Q5QFB9 102 aa13.11□□□□□ -0.31
RXRB-202ENST00000374685 PPDPFQ9H3Y8 114 aa13.11□□□□□ -0.31
RXRB-202ENST00000374685 NDUFA7O95182 113 aa13.11□□□□□ -0.31
RXRB-202ENST00000374685 LGALS3P17931 250 aaKnown RBP13.11□□□□□ -0.31
RXRB-202ENST00000374685 CHCHD7Q9BUK0 85 aa13.11□□□□□ -0.31
RXRB-202ENST00000374685 C9JAW5 83 aa13.1□□□□□ -0.31
RXRB-202ENST00000374685 DGAT2L7PQ6IED9 249 aa13.1□□□□□ -0.31
RXRB-202ENST00000374685 TRAV8-3A0A0A6YYJ7 113 aa13.1□□□□□ -0.31
RXRB-202ENST00000374685 C15orf53Q8NAA6 179 aa13.1□□□□□ -0.31
RXRB-202ENST00000374685 LOC100131303A0A0U1RQF7 123 aa13.09□□□□□ -0.31
RXRB-202ENST00000374685 A8MZ25 164 aa13.09□□□□□ -0.31
RXRB-202ENST00000374685 J3QQQ9 107 aa13.09□□□□□ -0.31
RXRB-202ENST00000374685 ZNF22P17026 224 aaPredicted RBP13.09□□□□□ -0.31
RXRB-202ENST00000374685 LINC00482Q8N8I6 264 aa13.09□□□□□ -0.31
RXRB-202ENST00000374685 SLC25A29Q8N8R3 303 aa13.09□□□□□ -0.31
RXRB-202ENST00000374685 A0A0J9YY99 117 aa13.08□□□□□ -0.31
RXRB-202ENST00000374685 RPL13AP40429 203 aaKnown RBP13.08□□□□□ -0.31
RXRB-202ENST00000374685 MRPL23Q16540 153 aaKnown RBP13.08□□□□□ -0.31
RXRB-202ENST00000374685 PRO1854Q9UHT4 67 aa13.08□□□□□ -0.31
RXRB-202ENST00000374685 DEFB130BP0DP73 79 aa13.08□□□□□ -0.32
RXRB-202ENST00000374685 DEFB130AP0DP74 79 aa13.08□□□□□ -0.32
RXRB-202ENST00000374685 FAM104AQ969W3 186 aa13.08□□□□□ -0.32
RXRB-202ENST00000374685 TRAV8-4A0A0B4J246 113 aa13.07□□□□□ -0.32
RXRB-202ENST00000374685 IGHV3-30P01768 117 aa13.07□□□□□ -0.32
RXRB-202ENST00000374685 IGHV3-30-5P0DP03 117 aa13.07□□□□□ -0.32
RXRB-202ENST00000374685 NTN5Q8WTR8 489 aaPredicted RBP13.07□□□□□ -0.32
RXRB-202ENST00000374685 UBE2D4Q9Y2X8 147 aa13.07□□□□□ -0.32
RXRB-202ENST00000374685 LINC00694P0DN24 101 aa13.06□□□□□ -0.32
RXRB-202ENST00000374685 RPL36AP83881 106 aaKnown RBP13.06□□□□□ -0.32
RXRB-202ENST00000374685 RPL36ALQ969Q0 106 aaKnown RBP13.06□□□□□ -0.32
RXRB-202ENST00000374685 K7EQD1 137 aa13.05□□□□□ -0.32
RXRB-202ENST00000374685 TMEM223A0PJW6 202 aa13.05□□□□□ -0.32
RXRB-202ENST00000374685 PIK3CD-AS1Q5SR53 167 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms