RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 OR5A1Q8NGJ0 315 aa7.59□□□□□ -1.19
HSPG2-202ENST00000374676 C18orf32Q8TCD1 76 aa7.59□□□□□ -1.19
HSPG2-202ENST00000374676 CDC42SE2Q9NRR3 84 aa7.59□□□□□ -1.19
HSPG2-202ENST00000374676 UBE2D4Q9Y2X8 147 aa7.59□□□□□ -1.19
HSPG2-202ENST00000374676 TRAV8-4A0A0B4J246 113 aa7.58□□□□□ -1.2
HSPG2-202ENST00000374676 RPL39P62891 51 aaKnown RBP7.58□□□□□ -1.2
HSPG2-202ENST00000374676 ZNF664Q8N3J9 261 aa7.58□□□□□ -1.2
HSPG2-202ENST00000374676 SPANXA1Q9NS26 97 aa7.58□□□□□ -1.2
HSPG2-202ENST00000374676 PYGO1Q9Y3Y4 419 aa7.58□□□□□ -1.2
HSPG2-202ENST00000374676 HECTD4Q9Y4D8 3996 aa7.58□□□□□ -1.2
HSPG2-202ENST00000374676 IGKV2D-24A0A075B6R9 120 aa7.57□□□□□ -1.2
HSPG2-202ENST00000374676 TRGC2P03986 189 aa7.57□□□□□ -1.2
HSPG2-202ENST00000374676 TNP2Q05952 138 aa7.57□□□□□ -1.2
HSPG2-202ENST00000374676 FA2HQ7L5A8 372 aa7.57□□□□□ -1.2
HSPG2-202ENST00000374676 C1orf43Q9BWL3 253 aa7.57□□□□□ -1.2
HSPG2-202ENST00000374676 CYSLTR1Q9Y271 337 aa7.57□□□□□ -1.2
HSPG2-202ENST00000374676 PSCAO43653 123 aa7.56□□□□□ -1.2
HSPG2-202ENST00000374676 RAB5BP61020 215 aa7.56□□□□□ -1.2
HSPG2-202ENST00000374676 MRPS36P82909 103 aaKnown RBP7.56□□□□□ -1.2
HSPG2-202ENST00000374676 CLPSL2Q6UWE3 100 aa7.56□□□□□ -1.2
HSPG2-202ENST00000374676 C2orf66Q6UXQ4 117 aa7.56□□□□□ -1.2
HSPG2-202ENST00000374676 LINC01549A6NIU2 74 aa7.55□□□□□ -1.2
HSPG2-202ENST00000374676 NPSP0C0P6 89 aa7.55□□□□□ -1.2
HSPG2-202ENST00000374676 LINC00614P0C842 121 aa7.55□□□□□ -1.2
HSPG2-202ENST00000374676 KRTAP26-1Q6PEX3 210 aa7.55□□□□□ -1.2
HSPG2-202ENST00000374676 FAM104AQ969W3 186 aa7.55□□□□□ -1.2
HSPG2-202ENST00000374676 URB1-AS1Q96HZ7 61 aa7.55□□□□□ -1.2
HSPG2-202ENST00000374676 AP5S1Q9NUS5 200 aa7.55□□□□□ -1.2
HSPG2-202ENST00000374676 A0A1B0GVY2 172 aa7.54□□□□□ -1.2
HSPG2-202ENST00000374676 LRCOL1A6NCL2 159 aa7.54□□□□□ -1.2
HSPG2-202ENST00000374676 CCL25O15444 150 aa7.54□□□□□ -1.2
HSPG2-202ENST00000374676 MAPKAPK5-AS1Q8N8E1 139 aa7.54□□□□□ -1.2
HSPG2-202ENST00000374676 TOMM6Q96B49 74 aa7.54□□□□□ -1.2
HSPG2-202ENST00000374676 IGLV10-54A0A075B6I4 117 aa7.53□□□□□ -1.2
HSPG2-202ENST00000374676 A0A087WTM6 91 aa7.53□□□□□ -1.2
HSPG2-202ENST00000374676 IGKV3OR2-268A0A0C4DH90 116 aa7.53□□□□□ -1.2
HSPG2-202ENST00000374676 LINC00959A0A1B0GUT2 108 aa7.53□□□□□ -1.2
HSPG2-202ENST00000374676 IGIPA6NJ69 53 aa7.53□□□□□ -1.2
HSPG2-202ENST00000374676 EREGO14944 169 aa7.53□□□□□ -1.2
HSPG2-202ENST00000374676 Q6ZUT4 128 aa7.53□□□□□ -1.2
HSPG2-202ENST00000374676 IGLV4-3A0A075B6K6 122 aa7.52□□□□□ -1.21
HSPG2-202ENST00000374676 C1orf196B1AJZ1 125 aa7.52□□□□□ -1.21
HSPG2-202ENST00000374676 SS18Q15532 418 aa7.52□□□□□ -1.21
HSPG2-202ENST00000374676 CHCHD10Q8WYQ3 142 aaPredicted RBP7.52□□□□□ -1.21
HSPG2-202ENST00000374676 CHCHD1Q96BP2 118 aaKnown RBP7.52□□□□□ -1.21
HSPG2-202ENST00000374676 TMEM141Q96I45 108 aa7.52□□□□□ -1.21
HSPG2-202ENST00000374676 TIMM17AQ99595 171 aa7.52□□□□□ -1.21
HSPG2-202ENST00000374676 OPRPNQ99935 248 aaPredicted RBP7.52□□□□□ -1.21
HSPG2-202ENST00000374676 EPPK1P58107 5090 aaKnown RBP7.51□□□□□ -1.21
HSPG2-202ENST00000374676 RNASE13Q5GAN3 156 aaKnown RBP7.51□□□□□ -1.21
HSPG2-202ENST00000374676 PAPPA-AS1Q5QFB9 102 aa7.51□□□□□ -1.21
HSPG2-202ENST00000374676 ERASQ7Z444 233 aa7.51□□□□□ -1.21
HSPG2-202ENST00000374676 BAGE3Q86Y29 109 aa7.51□□□□□ -1.21
HSPG2-202ENST00000374676 BAALCQ8WXS3 180 aa7.51□□□□□ -1.21
HSPG2-202ENST00000374676 SCGB3A1Q96QR1 104 aa7.51□□□□□ -1.21
HSPG2-202ENST00000374676 DNAH5Q8TE73 4624 aa7.5□□□□□ -1.21
HSPG2-202ENST00000374676 A0A096LNJ9 63 aa7.5□□□□□ -1.21
HSPG2-202ENST00000374676 GAGE12HA6NDE8 117 aa7.5□□□□□ -1.21
HSPG2-202ENST00000374676 AMELXQ99217 191 aa7.5□□□□□ -1.21
HSPG2-202ENST00000374676 VCX2Q9H322 139 aa7.5□□□□□ -1.21
HSPG2-202ENST00000374676 TRAV13-1A0A0B4J241 112 aa7.49□□□□□ -1.21
HSPG2-202ENST00000374676 HBDP02042 147 aa7.49□□□□□ -1.21
HSPG2-202ENST00000374676 WFDC2Q14508 124 aa7.49□□□□□ -1.21
HSPG2-202ENST00000374676 CD164L2Q6UWJ8 174 aa7.49□□□□□ -1.21
HSPG2-202ENST00000374676 Q6ZN92 141 aa7.49□□□□□ -1.21
HSPG2-202ENST00000374676 TEX43Q6ZNM6 134 aa7.49□□□□□ -1.21
HSPG2-202ENST00000374676 DYNC1H1Q14204 4646 aaKnown RBP7.48□□□□□ -1.21
HSPG2-202ENST00000374676 IFITM10A6NMD0 228 aa7.48□□□□□ -1.21
HSPG2-202ENST00000374676 XCL1P47992 114 aa7.48□□□□□ -1.21
HSPG2-202ENST00000374676 FOXI1Q12951 378 aa7.48□□□□□ -1.21
HSPG2-202ENST00000374676 C14orf177Q52M58 125 aa7.48□□□□□ -1.21
HSPG2-202ENST00000374676 PDZD11Q5EBL8 140 aa7.48□□□□□ -1.21
HSPG2-202ENST00000374676 LINC00173Q6ZV60 143 aa7.48□□□□□ -1.21
HSPG2-202ENST00000374676 Q8N814 137 aa7.48□□□□□ -1.21
HSPG2-202ENST00000374676 PGPEP1Q9NXJ5 209 aa7.48□□□□□ -1.21
HSPG2-202ENST00000374676 PKHD1P08F94 4074 aa7.47□□□□□ -1.21
HSPG2-202ENST00000374676 USP17L23D6RBM5 183 aa7.47□□□□□ -1.21
HSPG2-202ENST00000374676 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.47□□□□□ -1.21
HSPG2-202ENST00000374676 LECT2O14960 151 aa7.47□□□□□ -1.21
HSPG2-202ENST00000374676 HIST1H2BKO60814 126 aa7.47□□□□□ -1.21
HSPG2-202ENST00000374676 HIST1H2BJP06899 126 aa7.47□□□□□ -1.21
HSPG2-202ENST00000374676 HIST1H2BOP23527 126 aa7.47□□□□□ -1.21
HSPG2-202ENST00000374676 HIST1H2BBP33778 126 aa7.47□□□□□ -1.21
HSPG2-202ENST00000374676 HIST1H2BDP58876 126 aa7.47□□□□□ -1.21
HSPG2-202ENST00000374676 HIST1H2BCP62807 126 aa7.47□□□□□ -1.21
HSPG2-202ENST00000374676 HIST2H2BEQ16778 126 aa7.47□□□□□ -1.21
HSPG2-202ENST00000374676 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.47□□□□□ -1.21
HSPG2-202ENST00000374676 CFAP161Q6P656 301 aa7.47□□□□□ -1.21
HSPG2-202ENST00000374676 FAM19A3Q7Z5A8 133 aa7.47□□□□□ -1.21
HSPG2-202ENST00000374676 SPATA12Q7Z6I5 190 aa7.47□□□□□ -1.21
HSPG2-202ENST00000374676 NTN5Q8WTR8 489 aaPredicted RBP7.47□□□□□ -1.21
HSPG2-202ENST00000374676 HIST1H2BHQ93079 126 aa7.47□□□□□ -1.21
HSPG2-202ENST00000374676 HIST1H2BNQ99877 126 aa7.47□□□□□ -1.21
HSPG2-202ENST00000374676 HIST1H2BMQ99879 126 aa7.47□□□□□ -1.21
HSPG2-202ENST00000374676 C2orf88Q9BSF0 95 aa7.47□□□□□ -1.21
HSPG2-202ENST00000374676 HSBP1O75506 76 aa7.46□□□□□ -1.22
HSPG2-202ENST00000374676 SERF1AO75920 110 aa7.46□□□□□ -1.22
HSPG2-202ENST00000374676 ATP5LO75964 103 aa7.46□□□□□ -1.22
HSPG2-202ENST00000374676 UBE2D1P51668 147 aa7.46□□□□□ -1.22
HSPG2-202ENST00000374676 LINC00310P59036 64 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms