RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 DOPEY1Q5JWR5 2465 aa4.8□□□□□ -1.64
PTPN3-202ENST00000374541 PIEZO2Q9H5I5 2752 aa4.8□□□□□ -1.64
PTPN3-202ENST00000374541 H7C423 109 aa4.8□□□□□ -1.64
PTPN3-202ENST00000374541 C7orf33Q8WU49 177 aa4.8□□□□□ -1.64
PTPN3-202ENST00000374541 GTSF1Q8WW33 167 aa4.8□□□□□ -1.64
PTPN3-202ENST00000374541 IGHV4-4A0A075B6R2 117 aa4.8□□□□□ -1.64
PTPN3-202ENST00000374541 H0Y9J4 135 aa4.8□□□□□ -1.64
PTPN3-202ENST00000374541 NFE4Q86UQ8 179 aa4.8□□□□□ -1.64
PTPN3-202ENST00000374541 WI2-2373I1.2A0A1W2PRP0 233 aa4.79□□□□□ -1.64
PTPN3-202ENST00000374541 IGHV3-30P01768 117 aa4.79□□□□□ -1.64
PTPN3-202ENST00000374541 IGHV3-33P01772 117 aa4.79□□□□□ -1.64
PTPN3-202ENST00000374541 IGHV3-30-3P0DP02 117 aa4.79□□□□□ -1.64
PTPN3-202ENST00000374541 IGHV3-30-5P0DP03 117 aa4.79□□□□□ -1.64
PTPN3-202ENST00000374541 EML5Q05BV3 1969 aa4.79□□□□□ -1.64
PTPN3-202ENST00000374541 TEX22C9J3V5 150 aa4.79□□□□□ -1.64
PTPN3-202ENST00000374541 A6NDX4 124 aa4.79□□□□□ -1.64
PTPN3-202ENST00000374541 NCR3O14931 201 aa4.79□□□□□ -1.64
PTPN3-202ENST00000374541 IGKV4-1P06312 121 aa4.79□□□□□ -1.64
PTPN3-202ENST00000374541 GPHB5Q86YW7 130 aa4.79□□□□□ -1.64
PTPN3-202ENST00000374541 CELSR1Q9NYQ6 3014 aa4.79□□□□□ -1.64
PTPN3-202ENST00000374541 POLQO75417 2590 aa4.79□□□□□ -1.64
PTPN3-202ENST00000374541 GATA1P15976 413 aaPredicted RBP4.79□□□□□ -1.64
PTPN3-202ENST00000374541 MIR7-3HGQ8N6C7 128 aa4.79□□□□□ -1.64
PTPN3-202ENST00000374541 SIRPDQ9H106 197 aa4.79□□□□□ -1.64
PTPN3-202ENST00000374541 ZNF503-AS2A6NEH8 195 aa4.79□□□□□ -1.64
PTPN3-202ENST00000374541 K7EIM0 57 aa4.79□□□□□ -1.64
PTPN3-202ENST00000374541 CLEC2BQ92478 149 aa4.79□□□□□ -1.64
PTPN3-202ENST00000374541 C17orf77Q96MU5 243 aa4.79□□□□□ -1.64
PTPN3-202ENST00000374541 Q6ZSR3 168 aa4.78□□□□□ -1.64
PTPN3-202ENST00000374541 C5orf56Q8N8D9 126 aa4.78□□□□□ -1.64
PTPN3-202ENST00000374541 MUC7Q8TAX7 377 aa4.78□□□□□ -1.64
PTPN3-202ENST00000374541 ODF3Q96PU9 254 aa4.78□□□□□ -1.64
PTPN3-202ENST00000374541 COL5A1P20908 1838 aaPredicted RBP4.78□□□□□ -1.64
PTPN3-202ENST00000374541 C20orf197Q8N268 126 aa4.78□□□□□ -1.64
PTPN3-202ENST00000374541 IGKV1-17P01599 117 aa4.78□□□□□ -1.64
PTPN3-202ENST00000374541 CTSGP08311 255 aa4.78□□□□□ -1.64
PTPN3-202ENST00000374541 MRPS36P82909 103 aaKnown RBP4.78□□□□□ -1.64
PTPN3-202ENST00000374541 F8P00451 2351 aa4.77□□□□□ -1.65
PTPN3-202ENST00000374541 UBE2D1P51668 147 aa4.77□□□□□ -1.65
PTPN3-202ENST00000374541 C11orf71Q6IPW1 123 aa4.77□□□□□ -1.65
PTPN3-202ENST00000374541 MTORP42345 2549 aa4.77□□□□□ -1.65
PTPN3-202ENST00000374541 LINC00173Q6ZV60 143 aa4.77□□□□□ -1.65
PTPN3-202ENST00000374541 PHF3Q92576 2039 aaKnown RBP4.77□□□□□ -1.65
PTPN3-202ENST00000374541 IGHV7-81A0A0B4J1V7 117 aa4.77□□□□□ -1.65
PTPN3-202ENST00000374541 TCL1BO95988 128 aa4.77□□□□□ -1.65
PTPN3-202ENST00000374541 PRR14LQ5THK1 2151 aa4.77□□□□□ -1.65
PTPN3-202ENST00000374541 FAM222AQ5U5X8 452 aa4.77□□□□□ -1.65
PTPN3-202ENST00000374541 A0A0J9YWU9 116 aa4.77□□□□□ -1.65
PTPN3-202ENST00000374541 C2orf70A6NJV1 201 aa4.77□□□□□ -1.65
PTPN3-202ENST00000374541 C1orf134Q5TEV5 83 aa4.77□□□□□ -1.65
PTPN3-202ENST00000374541 HHLA3Q9XRX5 114 aa4.77□□□□□ -1.65
PTPN3-202ENST00000374541 LINC01548A6NM66 108 aa4.77□□□□□ -1.65
PTPN3-202ENST00000374541 PATE2Q6UY27 113 aa4.76□□□□□ -1.65
PTPN3-202ENST00000374541 SERP2Q8N6R1 65 aa4.76□□□□□ -1.65
PTPN3-202ENST00000374541 FAM167A-AS1Q96KT0 104 aa4.76□□□□□ -1.65
PTPN3-202ENST00000374541 LRP4O75096 1905 aa4.76□□□□□ -1.65
PTPN3-202ENST00000374541 TRAV23DV6A0A075B6W5 121 aa4.76□□□□□ -1.65
PTPN3-202ENST00000374541 TMEM263Q8WUH6 116 aaKnown RBP4.76□□□□□ -1.65
PTPN3-202ENST00000374541 PRO0255Q9UI72 69 aa4.76□□□□□ -1.65
PTPN3-202ENST00000374541 FRMD6-AS1P0C7T7 363 aa4.76□□□□□ -1.65
PTPN3-202ENST00000374541 CDPF1Q6NVV7 123 aa4.76□□□□□ -1.65
PTPN3-202ENST00000374541 ANKRD11Q6UB99 2663 aaPredicted RBP4.76□□□□□ -1.65
PTPN3-202ENST00000374541 C19orf71A6NCJ1 209 aa4.76□□□□□ -1.65
PTPN3-202ENST00000374541 NUPR1O60356 82 aa4.76□□□□□ -1.65
PTPN3-202ENST00000374541 DIAPH2-AS1Q14236 149 aa4.76□□□□□ -1.65
PTPN3-202ENST00000374541 IGLV10-54A0A075B6I4 117 aa4.76□□□□□ -1.65
PTPN3-202ENST00000374541 RPL39P62891 51 aaKnown RBP4.76□□□□□ -1.65
PTPN3-202ENST00000374541 WNK1Q9H4A3 2382 aa4.76□□□□□ -1.65
PTPN3-202ENST00000374541 TRBV30A0A0K0K1B3 111 aa4.75□□□□□ -1.65
PTPN3-202ENST00000374541 IBA57-AS1B1ANH7 110 aa4.75□□□□□ -1.65
PTPN3-202ENST00000374541 IGLC6P0CF74 106 aa4.75□□□□□ -1.65
PTPN3-202ENST00000374541 RSPO1Q2MKA7 263 aaPredicted RBP4.75□□□□□ -1.65
PTPN3-202ENST00000374541 KRTAP27-1Q3LI81 207 aa4.75□□□□□ -1.65
PTPN3-202ENST00000374541 MSRB1Q9NZV6 116 aa4.75□□□□□ -1.65
PTPN3-202ENST00000374541 PCDH15Q96QU1 1955 aa4.75□□□□□ -1.65
PTPN3-202ENST00000374541 C3orf84H3BNL1 204 aa4.75□□□□□ -1.65
PTPN3-202ENST00000374541 IGHV4-30-4P0DP06 118 aa4.75□□□□□ -1.65
PTPN3-202ENST00000374541 TNCP24821 2201 aa4.75□□□□□ -1.65
PTPN3-202ENST00000374541 FAM229AH3BQW9 127 aa4.75□□□□□ -1.65
PTPN3-202ENST00000374541 SPRNQ5BIV9 151 aa4.75□□□□□ -1.65
PTPN3-202ENST00000374541 SHANK1Q9Y566 2161 aa4.75□□□□□ -1.65
PTPN3-202ENST00000374541 CFAP46Q8IYW2 2715 aa4.75□□□□□ -1.65
PTPN3-202ENST00000374541 A0A1B0GXF2 115 aa4.75□□□□□ -1.65
PTPN3-202ENST00000374541 C1orf195Q5TG92 126 aa4.75□□□□□ -1.65
PTPN3-202ENST00000374541 DAND5Q8N907 189 aa4.75□□□□□ -1.65
PTPN3-202ENST00000374541 COL27A1Q8IZC6 1860 aaPredicted RBP4.75□□□□□ -1.65
PTPN3-202ENST00000374541 TIMM17BO60830 172 aa4.75□□□□□ -1.65
PTPN3-202ENST00000374541 FAM19A3Q7Z5A8 133 aa4.75□□□□□ -1.65
PTPN3-202ENST00000374541 C11orf53Q8IXP5 236 aa4.75□□□□□ -1.65
PTPN3-202ENST00000374541 C10orf142B7Z368 130 aa4.74□□□□□ -1.65
PTPN3-202ENST00000374541 IGKV2D-26A0A0A0MRZ7 120 aa4.74□□□□□ -1.65
PTPN3-202ENST00000374541 PTH2Q96A98 100 aa4.74□□□□□ -1.65
PTPN3-202ENST00000374541 KIAA2026Q5HYC2 2103 aa4.74□□□□□ -1.65
PTPN3-202ENST00000374541 ZFAND2AQ8N6M9 145 aa4.74□□□□□ -1.65
PTPN3-202ENST00000374541 SERP1Q9Y6X1 66 aa4.74□□□□□ -1.65
PTPN3-202ENST00000374541 SMIM9A6NGZ8 99 aa4.74□□□□□ -1.65
PTPN3-202ENST00000374541 TDRG1Q3Y452 100 aa4.74□□□□□ -1.65
PTPN3-202ENST00000374541 A0A0J9YX75 114 aa4.73□□□□□ -1.65
PTPN3-202ENST00000374541 MT-ATP8P03928 68 aa4.73□□□□□ -1.65
PTPN3-202ENST00000374541 NANOS2P60321 138 aaKnown RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 278.4 ms