RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 TSTD3H0UI37 97 aa10.67□□□□□ -0.7
HDHD3-202ENST00000374180 EREGO14944 169 aa10.67□□□□□ -0.7
HDHD3-202ENST00000374180 HLA-DQA1P01909 254 aa10.67□□□□□ -0.7
HDHD3-202ENST00000374180 FCER1GP30273 86 aa10.67□□□□□ -0.7
HDHD3-202ENST00000374180 ENHOQ6UWT2 76 aa10.67□□□□□ -0.7
HDHD3-202ENST00000374180 KIR2DL4Q99706 377 aa10.67□□□□□ -0.7
HDHD3-202ENST00000374180 COX11Q9Y6N1 276 aa10.67□□□□□ -0.7
HDHD3-202ENST00000374180 IGKV2D-24A0A075B6R9 120 aa10.66□□□□□ -0.7
HDHD3-202ENST00000374180 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.66□□□□□ -0.7
HDHD3-202ENST00000374180 IGKV2-29A2NJV5 120 aaPredicted RBP10.66□□□□□ -0.7
HDHD3-202ENST00000374180 H7C423 109 aa10.66□□□□□ -0.7
HDHD3-202ENST00000374180 AMMECR1LQ6DCA0 310 aa10.66□□□□□ -0.7
HDHD3-202ENST00000374180 LINC00269Q8N2A0 174 aa10.66□□□□□ -0.7
HDHD3-202ENST00000374180 PRELID3AQ96N28 172 aa10.66□□□□□ -0.7
HDHD3-202ENST00000374180 IGLV4-60A0A075B6I1 120 aa10.65□□□□□ -0.7
HDHD3-202ENST00000374180 A0A087WTM6 91 aa10.65□□□□□ -0.7
HDHD3-202ENST00000374180 NPYP01303 97 aa10.65□□□□□ -0.7
HDHD3-202ENST00000374180 ESDP10768 282 aa10.65□□□□□ -0.7
HDHD3-202ENST00000374180 C20orf203Q8NBC4 194 aa10.65□□□□□ -0.7
HDHD3-202ENST00000374180 RPL32P62910 135 aaKnown RBP10.64□□□□□ -0.71
HDHD3-202ENST00000374180 MIAQ16674 131 aa10.64□□□□□ -0.71
HDHD3-202ENST00000374180 RNASEKQ6P5S7 137 aaKnown RBP10.64□□□□□ -0.71
HDHD3-202ENST00000374180 CLPSL2Q6UWE3 100 aa10.64□□□□□ -0.71
HDHD3-202ENST00000374180 SPATA12Q7Z6I5 190 aa10.64□□□□□ -0.71
HDHD3-202ENST00000374180 PRR34Q9NV39 138 aa10.64□□□□□ -0.71
HDHD3-202ENST00000374180 FGF6P10767 208 aa10.63□□□□□ -0.71
HDHD3-202ENST00000374180 SMIM2Q9BVW6 85 aa10.63□□□□□ -0.71
HDHD3-202ENST00000374180 C1orf43Q9BWL3 253 aa10.63□□□□□ -0.71
HDHD3-202ENST00000374180 LAMTOR2Q9Y2Q5 125 aa10.63□□□□□ -0.71
HDHD3-202ENST00000374180 TCAPO15273 167 aa10.62□□□□□ -0.71
HDHD3-202ENST00000374180 REG3AQ06141 175 aa10.62□□□□□ -0.71
HDHD3-202ENST00000374180 LRCOL1A6NCL2 159 aa10.61□□□□□ -0.71
HDHD3-202ENST00000374180 BAGE3Q86Y29 109 aa10.61□□□□□ -0.71
HDHD3-202ENST00000374180 BIRC6Q9NR09 4857 aa10.61□□□□□ -0.71
HDHD3-202ENST00000374180 ZNF25P17030 456 aaPredicted RBP10.61□□□□□ -0.71
HDHD3-202ENST00000374180 KRTAP10-2P60368 255 aa10.61□□□□□ -0.71
HDHD3-202ENST00000374180 MAPKAPK5-AS1Q8N8E1 139 aa10.61□□□□□ -0.71
HDHD3-202ENST00000374180 TMEM101Q96IK0 257 aa10.61□□□□□ -0.71
HDHD3-202ENST00000374180 LOC389332A0A1B0GUA5 103 aa10.6□□□□□ -0.71
HDHD3-202ENST00000374180 CDPF1Q6NVV7 123 aa10.6□□□□□ -0.71
HDHD3-202ENST00000374180 BAALCQ8WXS3 180 aa10.6□□□□□ -0.71
HDHD3-202ENST00000374180 MAP1LC3AQ9H492 121 aa10.6□□□□□ -0.71
HDHD3-202ENST00000374180 PGPEP1Q9NXJ5 209 aa10.6□□□□□ -0.71
HDHD3-202ENST00000374180 TRAV8-4A0A0B4J246 113 aa10.59□□□□□ -0.71
HDHD3-202ENST00000374180 PRSS47A8MTI9 375 aa10.59□□□□□ -0.71
HDHD3-202ENST00000374180 C16orf90A8MZG2 172 aa10.59□□□□□ -0.71
HDHD3-202ENST00000374180 KIAA1644Q3SXP7 199 aa10.59□□□□□ -0.71
HDHD3-202ENST00000374180 OR5A1Q8NGJ0 315 aa10.59□□□□□ -0.71
HDHD3-202ENST00000374180 IGLV10-54A0A075B6I4 117 aa10.58□□□□□ -0.72
HDHD3-202ENST00000374180 LECT2O14960 151 aa10.58□□□□□ -0.72
HDHD3-202ENST00000374180 SMAGPQ0VAQ4 97 aa10.58□□□□□ -0.72
HDHD3-202ENST00000374180 DGAT2L7PQ6IED9 249 aa10.58□□□□□ -0.72
HDHD3-202ENST00000374180 MRPL52Q86TS9 123 aaKnown RBP10.58□□□□□ -0.72
HDHD3-202ENST00000374180 IGKV3OR2-268A0A0C4DH90 116 aa10.57□□□□□ -0.72
HDHD3-202ENST00000374180 SCGB1D1O95968 90 aa10.57□□□□□ -0.72
HDHD3-202ENST00000374180 DDTP30046 118 aa10.57□□□□□ -0.72
HDHD3-202ENST00000374180 Q8N814 137 aa10.57□□□□□ -0.72
HDHD3-202ENST00000374180 SERF1AO75920 110 aa10.56□□□□□ -0.72
HDHD3-202ENST00000374180 FUSP35637 526 aaKnown RBP eCLIP10.56□□□□□ -0.72
HDHD3-202ENST00000374180 WFDC2Q14508 124 aa10.56□□□□□ -0.72
HDHD3-202ENST00000374180 Q8N8P6 123 aa10.55□□□□□ -0.72
HDHD3-202ENST00000374180 CDC42SE2Q9NRR3 84 aa10.55□□□□□ -0.72
HDHD3-202ENST00000374180 DYNC1H1Q14204 4646 aaKnown RBP10.55□□□□□ -0.72
HDHD3-202ENST00000374180 KRTAP26-1Q6PEX3 210 aa10.55□□□□□ -0.72
HDHD3-202ENST00000374180 ZNF664Q8N3J9 261 aa10.55□□□□□ -0.72
HDHD3-202ENST00000374180 PRO1933Q9H354 126 aa10.55□□□□□ -0.72
HDHD3-202ENST00000374180 UBE2D4Q9Y2X8 147 aa10.55□□□□□ -0.72
HDHD3-202ENST00000374180 CSDC2Q9Y534 153 aaKnown RBP10.55□□□□□ -0.72
HDHD3-202ENST00000374180 NUPR1O60356 82 aa10.54□□□□□ -0.72
HDHD3-202ENST00000374180 RPL39P62891 51 aaKnown RBP10.54□□□□□ -0.72
HDHD3-202ENST00000374180 ALKBH7Q9BT30 221 aaPredicted RBP10.54□□□□□ -0.72
HDHD3-202ENST00000374180 TIMM21Q9BVV7 248 aa10.54□□□□□ -0.72
HDHD3-202ENST00000374180 NXT2Q9NPJ8 142 aaKnown RBP10.54□□□□□ -0.72
HDHD3-202ENST00000374180 LBHQ53QV2 105 aaPredicted RBP10.53□□□□□ -0.72
HDHD3-202ENST00000374180 NTN5Q8WTR8 489 aaPredicted RBP10.53□□□□□ -0.72
HDHD3-202ENST00000374180 IGLV5-52A0A0A0MRZ9 124 aa10.52□□□□□ -0.73
HDHD3-202ENST00000374180 IFI27P40305 119 aaPredicted RBP10.52□□□□□ -0.73
HDHD3-202ENST00000374180 DNAH5Q8TE73 4624 aa10.51□□□□□ -0.73
HDHD3-202ENST00000374180 K7EMI3 77 aa10.51□□□□□ -0.73
HDHD3-202ENST00000374180 LINC00310P59036 64 aa10.51□□□□□ -0.73
HDHD3-202ENST00000374180 C14orf177Q52M58 125 aa10.51□□□□□ -0.73
HDHD3-202ENST00000374180 CHCHD10Q8WYQ3 142 aaPredicted RBP10.51□□□□□ -0.73
HDHD3-202ENST00000374180 C14orf144Q96I85 54 aa10.51□□□□□ -0.73
HDHD3-202ENST00000374180 SPANXA1Q9NS26 97 aa10.51□□□□□ -0.73
HDHD3-202ENST00000374180 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.5□□□□□ -0.73
HDHD3-202ENST00000374180 LINC00959A0A1B0GUT2 108 aa10.5□□□□□ -0.73
HDHD3-202ENST00000374180 GAGE12HA6NDE8 117 aa10.5□□□□□ -0.73
HDHD3-202ENST00000374180 USP17L23D6RBM5 183 aa10.5□□□□□ -0.73
HDHD3-202ENST00000374180 ORMDL2Q53FV1 153 aa10.5□□□□□ -0.73
HDHD3-202ENST00000374180 PRSS3P2Q8NHM4 247 aa10.5□□□□□ -0.73
HDHD3-202ENST00000374180 LRP1BQ9NZR2 4599 aa10.5□□□□□ -0.73
HDHD3-202ENST00000374180 SS18Q15532 418 aa10.49□□□□□ -0.73
HDHD3-202ENST00000374180 RNASE13Q5GAN3 156 aaKnown RBP10.49□□□□□ -0.73
HDHD3-202ENST00000374180 GCSHP23434 173 aa10.49□□□□□ -0.73
HDHD3-202ENST00000374180 TEX43Q6ZNM6 134 aa10.49□□□□□ -0.73
HDHD3-202ENST00000374180 Q6ZUT4 128 aa10.49□□□□□ -0.73
HDHD3-202ENST00000374180 C18orf32Q8TCD1 76 aa10.49□□□□□ -0.73
HDHD3-202ENST00000374180 CCL25O15444 150 aa10.48□□□□□ -0.73
HDHD3-202ENST00000374180 XCL1P47992 114 aa10.48□□□□□ -0.73
HDHD3-202ENST00000374180 CYSLTR1Q9Y271 337 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms