RNA–Protein interactions for RNA: ENST00000373711.3

CDKN1A-202, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDKN1A, Length 793 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-202ENST00000373711 NEXN-AS1Q8NBZ9 246 aa9.56□□□□□ -0.88
CDKN1A-202ENST00000373711 NPYP01303 97 aa9.55□□□□□ -0.88
CDKN1A-202ENST00000373711 ORMDL3Q8N138 153 aa9.55□□□□□ -0.88
CDKN1A-202ENST00000373711 PRELID3AQ96N28 172 aa9.55□□□□□ -0.88
CDKN1A-202ENST00000373711 ALKBH7Q9BT30 221 aaPredicted RBP9.55□□□□□ -0.88
CDKN1A-202ENST00000373711 NIT2Q9NQR4 276 aa9.55□□□□□ -0.88
CDKN1A-202ENST00000373711 H7C1H1 209 aa9.54□□□□□ -0.88
CDKN1A-202ENST00000373711 TNFRSF6BO95407 300 aa9.54□□□□□ -0.88
CDKN1A-202ENST00000373711 PPBPP02775 128 aa9.54□□□□□ -0.88
CDKN1A-202ENST00000373711 C9orf163Q8N9P6 203 aa9.54□□□□□ -0.88
CDKN1A-202ENST00000373711 DNAJC30Q96LL9 226 aa9.54□□□□□ -0.88
CDKN1A-202ENST00000373711 USP17L23D6RBM5 183 aa9.53□□□□□ -0.88
CDKN1A-202ENST00000373711 TRBV10-1A0A0K0K1A3 114 aa9.52□□□□□ -0.89
CDKN1A-202ENST00000373711 TRBV6-5A0A0K0K1A5 114 aa9.52□□□□□ -0.89
CDKN1A-202ENST00000373711 PKIAP61925 76 aa9.52□□□□□ -0.89
CDKN1A-202ENST00000373711 TMEM262E9PQX1 116 aa9.51□□□□□ -0.89
CDKN1A-202ENST00000373711 POLR2KP53803 58 aaKnown RBP9.51□□□□□ -0.89
CDKN1A-202ENST00000373711 ST20Q9HBF5 79 aa9.51□□□□□ -0.89
CDKN1A-202ENST00000373711 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.51□□□□□ -0.89
CDKN1A-202ENST00000373711 TRBV7-3A0A075B6L6 115 aa9.5□□□□□ -0.89
CDKN1A-202ENST00000373711 LOC389332A0A1B0GUA5 103 aa9.5□□□□□ -0.89
CDKN1A-202ENST00000373711 PRSS47A8MTI9 375 aa9.5□□□□□ -0.89
CDKN1A-202ENST00000373711 UBE2D3P61077 147 aa9.5□□□□□ -0.89
CDKN1A-202ENST00000373711 UBE2D2P62837 147 aa9.5□□□□□ -0.89
CDKN1A-202ENST00000373711 RPL36AP83881 106 aaKnown RBP9.5□□□□□ -0.89
CDKN1A-202ENST00000373711 MIAQ16674 131 aa9.5□□□□□ -0.89
CDKN1A-202ENST00000373711 IQCJQ1A5X6 159 aa9.5□□□□□ -0.89
CDKN1A-202ENST00000373711 C18orf32Q8TCD1 76 aa9.5□□□□□ -0.89
CDKN1A-202ENST00000373711 RPL36ALQ969Q0 106 aaKnown RBP9.5□□□□□ -0.89
CDKN1A-202ENST00000373711 LAMTOR2Q9Y2Q5 125 aa9.5□□□□□ -0.89
CDKN1A-202ENST00000373711 SDHAF1A6NFY7 115 aa9.49□□□□□ -0.89
CDKN1A-202ENST00000373711 PPP1R17O96001 155 aa9.49□□□□□ -0.89
CDKN1A-202ENST00000373711 SUMO2P61956 95 aaKnown RBP9.49□□□□□ -0.89
CDKN1A-202ENST00000373711 C20orf78Q9BR46 151 aa9.49□□□□□ -0.89
CDKN1A-202ENST00000373711 C1orf196B1AJZ1 125 aa9.48□□□□□ -0.89
CDKN1A-202ENST00000373711 HIST1H2BKO60814 126 aa9.48□□□□□ -0.89
CDKN1A-202ENST00000373711 ANGP03950 147 aaKnown RBP9.48□□□□□ -0.89
CDKN1A-202ENST00000373711 HIST1H2BJP06899 126 aa9.48□□□□□ -0.89
CDKN1A-202ENST00000373711 PRSS1P07477 247 aa9.48□□□□□ -0.89
CDKN1A-202ENST00000373711 HIST1H2BOP23527 126 aa9.48□□□□□ -0.89
CDKN1A-202ENST00000373711 HIST1H2BBP33778 126 aa9.48□□□□□ -0.89
CDKN1A-202ENST00000373711 HIST1H2BDP58876 126 aa9.48□□□□□ -0.89
CDKN1A-202ENST00000373711 HIST1H2BCP62807 126 aa9.48□□□□□ -0.89
CDKN1A-202ENST00000373711 HIST2H2BEQ16778 126 aa9.48□□□□□ -0.89
CDKN1A-202ENST00000373711 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.48□□□□□ -0.89
CDKN1A-202ENST00000373711 ENHOQ6UWT2 76 aa9.48□□□□□ -0.89
CDKN1A-202ENST00000373711 HIST1H2BHQ93079 126 aa9.48□□□□□ -0.89
CDKN1A-202ENST00000373711 DPH3Q96FX2 82 aa9.48□□□□□ -0.89
CDKN1A-202ENST00000373711 URB1-AS1Q96HZ7 61 aa9.48□□□□□ -0.89
CDKN1A-202ENST00000373711 HIST1H2BNQ99877 126 aa9.48□□□□□ -0.89
CDKN1A-202ENST00000373711 HIST1H2BMQ99879 126 aa9.48□□□□□ -0.89
CDKN1A-202ENST00000373711 MAP1LC3AQ9H492 121 aa9.48□□□□□ -0.89
CDKN1A-202ENST00000373711 IFI27P40305 119 aaPredicted RBP9.47□□□□□ -0.89
CDKN1A-202ENST00000373711 C7orf33Q8WU49 177 aa9.47□□□□□ -0.89
CDKN1A-202ENST00000373711 SMIM2Q9BVW6 85 aa9.47□□□□□ -0.89
CDKN1A-202ENST00000373711 TRBV27A0A0K0K1C4 114 aa9.46□□□□□ -0.9
CDKN1A-202ENST00000373711 VCYO14598 125 aa9.46□□□□□ -0.9
CDKN1A-202ENST00000373711 PMCHP20382 165 aa9.46□□□□□ -0.9
CDKN1A-202ENST00000373711 RPL32P62910 135 aaKnown RBP9.46□□□□□ -0.9
CDKN1A-202ENST00000373711 CIRBPQ14011 172 aaKnown RBP9.46□□□□□ -0.9
CDKN1A-202ENST00000373711 SDIM1Q6ZPB5 146 aa9.46□□□□□ -0.9
CDKN1A-202ENST00000373711 Q8N8P6 123 aa9.46□□□□□ -0.9
CDKN1A-202ENST00000373711 LINC01600Q96MT4 127 aa9.46□□□□□ -0.9
CDKN1A-202ENST00000373711 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.45□□□□□ -0.9
CDKN1A-202ENST00000373711 I3L3M4 83 aa9.45□□□□□ -0.9
CDKN1A-202ENST00000373711 NTM-AS1Q6ZSK4 140 aa9.45□□□□□ -0.9
CDKN1A-202ENST00000373711 PRSS3P2Q8NHM4 247 aa9.45□□□□□ -0.9
CDKN1A-202ENST00000373711 IGHV3-64A0A075B6Q5 118 aa9.44□□□□□ -0.9
CDKN1A-202ENST00000373711 TRBV6-8A0A0A6YYG3 113 aa9.44□□□□□ -0.9
CDKN1A-202ENST00000373711 PANO1I0J062 215 aa9.44□□□□□ -0.9
CDKN1A-202ENST00000373711 TCAPO15273 167 aa9.44□□□□□ -0.9
CDKN1A-202ENST00000373711 TSHBP01222 138 aa9.44□□□□□ -0.9
CDKN1A-202ENST00000373711 MPV17L2Q567V2 206 aa9.44□□□□□ -0.9
CDKN1A-202ENST00000373711 AP5S1Q9NUS5 200 aa9.44□□□□□ -0.9
CDKN1A-202ENST00000373711 NUPR1O60356 82 aa9.43□□□□□ -0.9
CDKN1A-202ENST00000373711 LINC00310P59036 64 aa9.43□□□□□ -0.9
CDKN1A-202ENST00000373711 RAB5BP61020 215 aa9.43□□□□□ -0.9
CDKN1A-202ENST00000373711 CNBPP62633 177 aaKnown RBP9.43□□□□□ -0.9
CDKN1A-202ENST00000373711 CHCHD5Q9BSY4 110 aa9.43□□□□□ -0.9
CDKN1A-202ENST00000373711 NXT2Q9NPJ8 142 aaKnown RBP9.43□□□□□ -0.9
CDKN1A-202ENST00000373711 LINC01546A6NGU7 62 aa9.42□□□□□ -0.9
CDKN1A-202ENST00000373711 LINC00614P0C842 121 aa9.42□□□□□ -0.9
CDKN1A-202ENST00000373711 NDUFA6P56556 154 aa9.42□□□□□ -0.9
CDKN1A-202ENST00000373711 TMEM97Q5BJF2 176 aa9.42□□□□□ -0.9
CDKN1A-202ENST00000373711 BAGE3Q86Y29 109 aa9.42□□□□□ -0.9
CDKN1A-202ENST00000373711 A0A087WYN8 130 aa9.41□□□□□ -0.9
CDKN1A-202ENST00000373711 COTL1Q14019 142 aa9.41□□□□□ -0.9
CDKN1A-202ENST00000373711 FA2HQ7L5A8 372 aa9.41□□□□□ -0.9
CDKN1A-202ENST00000373711 KIR2DL4Q99706 377 aa9.41□□□□□ -0.9
CDKN1A-202ENST00000373711 A0A0J9YXV3 536 aa9.4□□□□□ -0.9
CDKN1A-202ENST00000373711 hDV102S1A0JD36 115 aa9.4□□□□□ -0.9
CDKN1A-202ENST00000373711 SERF1AO75920 110 aa9.4□□□□□ -0.9
CDKN1A-202ENST00000373711 RNASEKQ6P5S7 137 aaKnown RBP9.4□□□□□ -0.9
CDKN1A-202ENST00000373711 REG3GQ6UW15 175 aa9.4□□□□□ -0.9
CDKN1A-202ENST00000373711 SPACA4Q8TDM5 124 aa9.4□□□□□ -0.9
CDKN1A-202ENST00000373711 PRR34Q9NV39 138 aa9.4□□□□□ -0.9
CDKN1A-202ENST00000373711 ESDP10768 282 aa9.39□□□□□ -0.91
CDKN1A-202ENST00000373711 FCER1GP30273 86 aa9.39□□□□□ -0.91
CDKN1A-202ENST00000373711 AMTP48728 403 aa9.38□□□□□ -0.91
CDKN1A-202ENST00000373711 COA6Q5JTJ3 125 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms