RNA–Protein interactions for RNA: ENST00000373387.8

GARNL3-202, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GARNL3, Length 3,800 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-202ENST00000373387 FAM240AA0A1B0GVK7 77 aa5.38□□□□□ -1.55
GARNL3-202ENST00000373387 SNCGO76070 127 aa5.38□□□□□ -1.55
GARNL3-202ENST00000373387 IFITM1P13164 125 aa5.38□□□□□ -1.55
GARNL3-202ENST00000373387 BEX4Q9NWD9 120 aaPredicted RBP5.38□□□□□ -1.55
GARNL3-202ENST00000373387 C18orf65Q6ZTR6 163 aa5.38□□□□□ -1.55
GARNL3-202ENST00000373387 DUX3Q96PT4 197 aa5.38□□□□□ -1.55
GARNL3-202ENST00000373387 RNASE13Q5GAN3 156 aaKnown RBP5.38□□□□□ -1.55
GARNL3-202ENST00000373387 LINC01356Q8N9X3 169 aa5.38□□□□□ -1.55
GARNL3-202ENST00000373387 TMEM101Q96IK0 257 aa5.38□□□□□ -1.55
GARNL3-202ENST00000373387 DUX5Q96PT3 197 aa5.38□□□□□ -1.55
GARNL3-202ENST00000373387 IGHV3OR16-12A0A075B7B8 117 aa5.37□□□□□ -1.55
GARNL3-202ENST00000373387 COX6A2Q02221 97 aa5.37□□□□□ -1.55
GARNL3-202ENST00000373387 GAGE2BQ13066 116 aa5.37□□□□□ -1.55
GARNL3-202ENST00000373387 MRPL23Q16540 153 aaKnown RBP5.37□□□□□ -1.55
GARNL3-202ENST00000373387 GAGE2EQ4V326 116 aa5.37□□□□□ -1.55
GARNL3-202ENST00000373387 C2orf82Q6UX34 121 aa5.37□□□□□ -1.55
GARNL3-202ENST00000373387 SDIM1Q6ZPB5 146 aa5.37□□□□□ -1.55
GARNL3-202ENST00000373387 GAGE2DQ9UEU5 116 aa5.37□□□□□ -1.55
GARNL3-202ENST00000373387 C22orf24Q9Y442 160 aa5.37□□□□□ -1.55
GARNL3-202ENST00000373387 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.37□□□□□ -1.55
GARNL3-202ENST00000373387 IGKV2-29A2NJV5 120 aaPredicted RBP5.37□□□□□ -1.55
GARNL3-202ENST00000373387 CDKN2A-AS1Q9UH64 79 aa5.37□□□□□ -1.55
GARNL3-202ENST00000373387 CSDC2Q9Y534 153 aaKnown RBP5.37□□□□□ -1.55
GARNL3-202ENST00000373387 FLNCQ14315 2725 aa5.37□□□□□ -1.55
GARNL3-202ENST00000373387 DEFB131AP59861 70 aa5.37□□□□□ -1.55
GARNL3-202ENST00000373387 SHISA2Q6UWI4 295 aa5.37□□□□□ -1.55
GARNL3-202ENST00000373387 MAP6D1Q9H9H5 199 aa5.37□□□□□ -1.55
GARNL3-202ENST00000373387 HTN1P15515 57 aa5.36□□□□□ -1.55
GARNL3-202ENST00000373387 SLURP1P55000 103 aa5.36□□□□□ -1.55
GARNL3-202ENST00000373387 LINC00242Q5T6M2 205 aa5.36□□□□□ -1.55
GARNL3-202ENST00000373387 F5H768 121 aa5.36□□□□□ -1.55
GARNL3-202ENST00000373387 SVIPQ8NHG7 77 aa5.36□□□□□ -1.55
GARNL3-202ENST00000373387 ZNF625Q96I27 306 aaPredicted RBP5.36□□□□□ -1.55
GARNL3-202ENST00000373387 DOPEY1Q5JWR5 2465 aa5.36□□□□□ -1.55
GARNL3-202ENST00000373387 NDUFV3P56181 108 aaKnown RBP5.36□□□□□ -1.55
GARNL3-202ENST00000373387 SOSTDC1Q6X4U4 206 aa5.36□□□□□ -1.55
GARNL3-202ENST00000373387 CLEC2BQ92478 149 aa5.35□□□□□ -1.55
GARNL3-202ENST00000373387 IGSF10Q6WRI0 2623 aa5.35□□□□□ -1.55
GARNL3-202ENST00000373387 SMIM1B2RUZ4 78 aa5.35□□□□□ -1.55
GARNL3-202ENST00000373387 GAGE5Q13069 117 aa5.35□□□□□ -1.55
GARNL3-202ENST00000373387 GAGE6Q13070 117 aa5.35□□□□□ -1.55
GARNL3-202ENST00000373387 FLNBO75369 2602 aaKnown RBP5.35□□□□□ -1.55
GARNL3-202ENST00000373387 CIRBPQ14011 172 aaKnown RBP5.35□□□□□ -1.55
GARNL3-202ENST00000373387 NTM-AS1Q6ZSK4 140 aa5.35□□□□□ -1.55
GARNL3-202ENST00000373387 LINC00308Q8TCZ7 52 aa5.35□□□□□ -1.55
GARNL3-202ENST00000373387 C4orf3Q8WVX3 66 aa5.35□□□□□ -1.55
GARNL3-202ENST00000373387 NRGNQ92686 78 aa5.35□□□□□ -1.55
GARNL3-202ENST00000373387 TRBV7-7A0A0K0K1E9 115 aa5.34□□□□□ -1.55
GARNL3-202ENST00000373387 LINC00694P0DN24 101 aa5.34□□□□□ -1.55
GARNL3-202ENST00000373387 NPC2P61916 151 aa5.34□□□□□ -1.55
GARNL3-202ENST00000373387 C15orf53Q8NAA6 179 aa5.34□□□□□ -1.55
GARNL3-202ENST00000373387 USP24Q9UPU5 2620 aa5.34□□□□□ -1.55
GARNL3-202ENST00000373387 DEFB136Q30KP8 78 aa5.34□□□□□ -1.55
GARNL3-202ENST00000373387 TTC32Q5I0X7 151 aa5.34□□□□□ -1.55
GARNL3-202ENST00000373387 PEMTQ9UBM1 199 aa5.34□□□□□ -1.55
GARNL3-202ENST00000373387 ACANP16112 2415 aa5.34□□□□□ -1.55
GARNL3-202ENST00000373387 MTORP42345 2549 aa5.34□□□□□ -1.56
GARNL3-202ENST00000373387 DEFB114Q30KQ6 69 aa5.34□□□□□ -1.56
GARNL3-202ENST00000373387 C1orf158Q8N1D5 194 aa5.34□□□□□ -1.56
GARNL3-202ENST00000373387 COPS9Q8WXC6 57 aa5.34□□□□□ -1.56
GARNL3-202ENST00000373387 LINC01587Q99440 93 aa5.34□□□□□ -1.56
GARNL3-202ENST00000373387 ANK3Q12955 4377 aaKnown RBP5.34□□□□□ -1.56
GARNL3-202ENST00000373387 J3QKU1 62 aa5.33□□□□□ -1.56
GARNL3-202ENST00000373387 INSP01308 110 aa5.33□□□□□ -1.56
GARNL3-202ENST00000373387 HERVK_113P63121 156 aa5.33□□□□□ -1.56
GARNL3-202ENST00000373387 IGHV3-38A0A0C4DH36 116 aa5.33□□□□□ -1.56
GARNL3-202ENST00000373387 IGHV4-31P0DP07 118 aa5.33□□□□□ -1.56
GARNL3-202ENST00000373387 DGAT2L7PQ6IED9 249 aa5.33□□□□□ -1.56
GARNL3-202ENST00000373387 DAND5Q8N907 189 aa5.33□□□□□ -1.56
GARNL3-202ENST00000373387 SORL1Q92673 2214 aa5.33□□□□□ -1.56
GARNL3-202ENST00000373387 ODF3L2Q3SX64 289 aa5.33□□□□□ -1.56
GARNL3-202ENST00000373387 COX7A2LO14548 114 aa5.32□□□□□ -1.56
GARNL3-202ENST00000373387 CDC42SE2Q9NRR3 84 aa5.32□□□□□ -1.56
GARNL3-202ENST00000373387 UBR5O95071 2799 aaPredicted RBP5.32□□□□□ -1.56
GARNL3-202ENST00000373387 PLAC8L1A1L4L8 177 aa5.32□□□□□ -1.56
GARNL3-202ENST00000373387 Q96MF0 132 aa5.32□□□□□ -1.56
GARNL3-202ENST00000373387 TRBV10-1A0A0K0K1A3 114 aa5.31□□□□□ -1.56
GARNL3-202ENST00000373387 NDUFA7O95182 113 aa5.31□□□□□ -1.56
GARNL3-202ENST00000373387 Q9H8V8 135 aa5.31□□□□□ -1.56
GARNL3-202ENST00000373387 HECTD1Q9ULT8 2610 aa5.31□□□□□ -1.56
GARNL3-202ENST00000373387 GAGE12JA6NER3 117 aa5.31□□□□□ -1.56
GARNL3-202ENST00000373387 GAGE7O76087 117 aa5.31□□□□□ -1.56
GARNL3-202ENST00000373387 GAGE12FP0CL80 117 aa5.31□□□□□ -1.56
GARNL3-202ENST00000373387 GAGE12GP0CL81 117 aa5.31□□□□□ -1.56
GARNL3-202ENST00000373387 GAGE12IP0CL82 117 aa5.31□□□□□ -1.56
GARNL3-202ENST00000373387 GAGE4Q13068 117 aa5.31□□□□□ -1.56
GARNL3-202ENST00000373387 DYNLRB2Q8TF09 96 aa5.31□□□□□ -1.56
GARNL3-202ENST00000373387 GIG44P09565 113 aaPredicted RBP5.31□□□□□ -1.56
GARNL3-202ENST00000373387 MAPK1IP1LQ8NDC0 245 aa5.31□□□□□ -1.56
GARNL3-202ENST00000373387 SMCR5Q8TEV8 140 aa5.31□□□□□ -1.56
GARNL3-202ENST00000373387 CHD6Q8TD26 2715 aa5.3□□□□□ -1.56
GARNL3-202ENST00000373387 JMJD1CQ15652 2540 aa5.3□□□□□ -1.56
GARNL3-202ENST00000373387 CCDC179H3BU77 68 aa5.3□□□□□ -1.56
GARNL3-202ENST00000373387 ACYP1P07311 99 aa5.3□□□□□ -1.56
GARNL3-202ENST00000373387 WNK1Q9H4A3 2382 aa5.3□□□□□ -1.56
GARNL3-202ENST00000373387 TRACP01848 142 aa5.3□□□□□ -1.56
GARNL3-202ENST00000373387 FAM218AQ96MZ4 157 aa5.3□□□□□ -1.56
GARNL3-202ENST00000373387 ANKRD17O75179 2603 aaKnown RBP5.3□□□□□ -1.56
GARNL3-202ENST00000373387 B5MCH6 92 aa5.3□□□□□ -1.56
GARNL3-202ENST00000373387 K7EQD1 137 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms