RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 ANKRD17O75179 2603 aaKnown RBP10□□□□□ -0.81
USP49-201ENST00000373006 MAPK1IP1LQ8NDC0 245 aa10□□□□□ -0.81
USP49-201ENST00000373006 PYGO1Q9Y3Y4 419 aa9.99□□□□□ -0.81
USP49-201ENST00000373006 IGHV4-30-2A0A087WSY4 118 aa9.99□□□□□ -0.81
USP49-201ENST00000373006 TMEM61Q8N0U2 210 aa9.99□□□□□ -0.81
USP49-201ENST00000373006 NAV2Q8IVL1 2488 aa9.99□□□□□ -0.81
USP49-201ENST00000373006 DOPEY1Q5JWR5 2465 aa9.98□□□□□ -0.81
USP49-201ENST00000373006 TRAV13-1A0A0B4J241 112 aa9.98□□□□□ -0.81
USP49-201ENST00000373006 hADV29S1A0JD25 119 aa9.98□□□□□ -0.81
USP49-201ENST00000373006 AVPP01185 164 aa9.98□□□□□ -0.81
USP49-201ENST00000373006 CFHR3Q02985 330 aa9.98□□□□□ -0.81
USP49-201ENST00000373006 SPANXDQ9BXN6 97 aa9.98□□□□□ -0.81
USP49-201ENST00000373006 SPANXCQ9NY87 97 aa9.98□□□□□ -0.81
USP49-201ENST00000373006 CDKN2A-AS1Q9UH64 79 aa9.98□□□□□ -0.81
USP49-201ENST00000373006 LST1O00453 97 aa9.98□□□□□ -0.81
USP49-201ENST00000373006 PIMREGQ9BSJ6 248 aa9.98□□□□□ -0.81
USP49-201ENST00000373006 PSMB8P28062 276 aa9.97□□□□□ -0.81
USP49-201ENST00000373006 CCL19Q99731 98 aa9.97□□□□□ -0.81
USP49-201ENST00000373006 JMJD1CQ15652 2540 aa9.97□□□□□ -0.81
USP49-201ENST00000373006 H3BT86 120 aa9.97□□□□□ -0.81
USP49-201ENST00000373006 NDUFA7O95182 113 aa9.97□□□□□ -0.81
USP49-201ENST00000373006 FBN2P35556 2912 aa9.97□□□□□ -0.81
USP49-201ENST00000373006 Q6Q795 121 aa9.97□□□□□ -0.81
USP49-201ENST00000373006 LINC00467Q9BRT7 94 aa9.97□□□□□ -0.81
USP49-201ENST00000373006 CHCHD7Q9BUK0 85 aa9.97□□□□□ -0.81
USP49-201ENST00000373006 UBE2D4Q9Y2X8 147 aa9.97□□□□□ -0.81
USP49-201ENST00000373006 USP24Q9UPU5 2620 aa9.96□□□□□ -0.81
USP49-201ENST00000373006 TINCRA0A1B0GVN0 87 aa9.96□□□□□ -0.81
USP49-201ENST00000373006 GAGE2AQ6NT46 116 aa9.96□□□□□ -0.82
USP49-201ENST00000373006 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.96□□□□□ -0.82
USP49-201ENST00000373006 LINC01600Q96MT4 127 aa9.96□□□□□ -0.82
USP49-201ENST00000373006 TMEM126AQ9H061 195 aa9.96□□□□□ -0.82
USP49-201ENST00000373006 IGHV4-59P01825 116 aa9.95□□□□□ -0.82
USP49-201ENST00000373006 HOXD3P31249 432 aaPredicted RBP9.95□□□□□ -0.82
USP49-201ENST00000373006 TEX15Q9BXT5 2789 aa9.95□□□□□ -0.82
USP49-201ENST00000373006 KIR2DL5BQ8NHK3 375 aa9.95□□□□□ -0.82
USP49-201ENST00000373006 CITED2Q99967 270 aaPredicted RBP9.95□□□□□ -0.82
USP49-201ENST00000373006 HIST2H2BDQ6DRA6 164 aa9.94□□□□□ -0.82
USP49-201ENST00000373006 DSCR8Q96T75 97 aa9.94□□□□□ -0.82
USP49-201ENST00000373006 DEFB131AP59861 70 aa9.93□□□□□ -0.82
USP49-201ENST00000373006 COX6A2Q02221 97 aa9.93□□□□□ -0.82
USP49-201ENST00000373006 NF1P21359 2839 aa9.93□□□□□ -0.82
USP49-201ENST00000373006 IGKV3D-7A0A0C4DH55 119 aa9.93□□□□□ -0.82
USP49-201ENST00000373006 MSMBP08118 114 aa9.93□□□□□ -0.82
USP49-201ENST00000373006 C3orf22Q8N5N4 141 aa9.93□□□□□ -0.82
USP49-201ENST00000373006 DGAT2L7PQ6IED9 249 aa9.92□□□□□ -0.82
USP49-201ENST00000373006 C10orf105Q8TEF2 133 aa9.92□□□□□ -0.82
USP49-201ENST00000373006 SMCR5Q8TEV8 140 aa9.92□□□□□ -0.82
USP49-201ENST00000373006 CHD6Q8TD26 2715 aa9.92□□□□□ -0.82
USP49-201ENST00000373006 SDIM1Q6ZPB5 146 aa9.92□□□□□ -0.82
USP49-201ENST00000373006 DNAJC30Q96LL9 226 aa9.92□□□□□ -0.82
USP49-201ENST00000373006 Q9H8V8 135 aa9.92□□□□□ -0.82
USP49-201ENST00000373006 Q8N2B8 174 aa9.91□□□□□ -0.82
USP49-201ENST00000373006 SPANXA1Q9NS26 97 aa9.91□□□□□ -0.82
USP49-201ENST00000373006 RNF152Q8N8N0 203 aa9.91□□□□□ -0.82
USP49-201ENST00000373006 J3KT08 172 aa9.91□□□□□ -0.82
USP49-201ENST00000373006 HRCT1Q6UXD1 115 aa9.91□□□□□ -0.82
USP49-201ENST00000373006 CYSTM1Q9H1C7 97 aa9.91□□□□□ -0.82
USP49-201ENST00000373006 F5H768 121 aa9.9□□□□□ -0.82
USP49-201ENST00000373006 DEFB136Q30KP8 78 aa9.9□□□□□ -0.82
USP49-201ENST00000373006 DEFB112Q30KQ8 113 aa9.9□□□□□ -0.82
USP49-201ENST00000373006 LINC00308Q8TCZ7 52 aa9.9□□□□□ -0.82
USP49-201ENST00000373006 PRORYQ9H606 182 aa9.9□□□□□ -0.82
USP49-201ENST00000373006 Q9HAA7 133 aa9.9□□□□□ -0.82
USP49-201ENST00000373006 RBMY1BA6NDE4 496 aaKnown RBP9.9□□□□□ -0.82
USP49-201ENST00000373006 RBMY1EA6NEQ0 496 aaKnown RBP9.9□□□□□ -0.82
USP49-201ENST00000373006 RBMY1DP0C7P1 496 aaKnown RBP9.9□□□□□ -0.82
USP49-201ENST00000373006 CIRBPQ14011 172 aaKnown RBP9.9□□□□□ -0.82
USP49-201ENST00000373006 A0A087WVE0 104 aa9.89□□□□□ -0.83
USP49-201ENST00000373006 FAM240AA0A1B0GVK7 77 aa9.89□□□□□ -0.83
USP49-201ENST00000373006 NDUFA1O15239 70 aa9.89□□□□□ -0.83
USP49-201ENST00000373006 DEFB121Q5J5C9 76 aa9.89□□□□□ -0.83
USP49-201ENST00000373006 C4orf26Q17RF5 130 aa9.88□□□□□ -0.83
USP49-201ENST00000373006 IGHV3OR16-12A0A075B7B8 117 aa9.88□□□□□ -0.83
USP49-201ENST00000373006 SOSTDC1Q6X4U4 206 aa9.88□□□□□ -0.83
USP49-201ENST00000373006 C18orf65Q6ZTR6 163 aa9.88□□□□□ -0.83
USP49-201ENST00000373006 NIPBLQ6KC79 2804 aaeCLIP9.88□□□□□ -0.83
USP49-201ENST00000373006 TIMM17BO60830 172 aa9.87□□□□□ -0.83
USP49-201ENST00000373006 SLURP1P55000 103 aa9.87□□□□□ -0.83
USP49-201ENST00000373006 DAZ2Q13117 558 aaKnown RBP9.87□□□□□ -0.83
USP49-201ENST00000373006 DAZ4Q86SG3 579 aaKnown RBP9.87□□□□□ -0.83
USP49-201ENST00000373006 DAZ3Q9NR90 486 aaKnown RBP9.87□□□□□ -0.83
USP49-201ENST00000373006 UQCRQO14949 82 aa9.87□□□□□ -0.83
USP49-201ENST00000373006 LINC00242Q5T6M2 205 aa9.86□□□□□ -0.83
USP49-201ENST00000373006 MTORP42345 2549 aa9.86□□□□□ -0.83
USP49-201ENST00000373006 ZNF415Q09FC8 603 aa9.86□□□□□ -0.83
USP49-201ENST00000373006 KHDC1LQ5JSQ8 128 aa9.86□□□□□ -0.83
USP49-201ENST00000373006 ACANP16112 2415 aa9.86□□□□□ -0.83
USP49-201ENST00000373006 A0A1B0GX51 115 aa9.85□□□□□ -0.83
USP49-201ENST00000373006 COX7A2LO14548 114 aa9.85□□□□□ -0.83
USP49-201ENST00000373006 TRBV7-7A0A0K0K1E9 115 aa9.85□□□□□ -0.83
USP49-201ENST00000373006 WIPF1O43516 503 aa9.85□□□□□ -0.83
USP49-201ENST00000373006 IGHV3-53P01767 116 aa9.85□□□□□ -0.83
USP49-201ENST00000373006 OR13C6PQ8NH95 151 aa9.85□□□□□ -0.83
USP49-201ENST00000373006 B4DSR2 109 aa9.85□□□□□ -0.83
USP49-201ENST00000373006 TIRAPP58753 221 aa9.85□□□□□ -0.83
USP49-201ENST00000373006 PIK3CD-AS1Q5SR53 167 aa9.85□□□□□ -0.83
USP49-201ENST00000373006 PRIMA1Q86XR5 153 aa9.85□□□□□ -0.83
USP49-201ENST00000373006 BAALC-AS2P0C853 105 aa9.84□□□□□ -0.83
USP49-201ENST00000373006 HIST1H4AP62805 103 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms