RNA–Protein interactions for RNA: ENST00000372857.7

PABPC4-202, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 1 (best) BASIC

Gene PABPC4, Length 3,048 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-202ENST00000372857 TRBV7-7A0A0K0K1E9 115 aa11.56□□□□□ -0.56
PABPC4-202ENST00000372857 AVPP01185 164 aa11.56□□□□□ -0.56
PABPC4-202ENST00000372857 IGHG2P01859 326 aa11.56□□□□□ -0.56
PABPC4-202ENST00000372857 PRB1P04280 392 aa11.56□□□□□ -0.56
PABPC4-202ENST00000372857 CITED2Q99967 270 aaPredicted RBP11.56□□□□□ -0.56
PABPC4-202ENST00000372857 IGHV3-38A0A0C4DH36 116 aa11.55□□□□□ -0.56
PABPC4-202ENST00000372857 SMCR5Q8TEV8 140 aa11.55□□□□□ -0.56
PABPC4-202ENST00000372857 CDKN2A-AS1Q9UH64 79 aa11.54□□□□□ -0.56
PABPC4-202ENST00000372857 USP24Q9UPU5 2620 aa11.54□□□□□ -0.56
PABPC4-202ENST00000372857 TINCRA0A1B0GVN0 87 aa11.54□□□□□ -0.56
PABPC4-202ENST00000372857 SNRPD3P62318 126 aaKnown RBP11.54□□□□□ -0.56
PABPC4-202ENST00000372857 NF1P21359 2839 aa11.54□□□□□ -0.56
PABPC4-202ENST00000372857 PRORYQ9H606 182 aa11.53□□□□□ -0.56
PABPC4-202ENST00000372857 H3BUA1 57 aa11.53□□□□□ -0.56
PABPC4-202ENST00000372857 RBMY1A1P0DJD3 496 aaKnown RBP11.53□□□□□ -0.56
PABPC4-202ENST00000372857 RBMY1CP0DJD4 496 aa11.53□□□□□ -0.56
PABPC4-202ENST00000372857 RBMY1FQ15415 496 aaKnown RBP11.53□□□□□ -0.56
PABPC4-202ENST00000372857 Q6ZSN1 163 aa11.53□□□□□ -0.56
PABPC4-202ENST00000372857 DNAJC30Q96LL9 226 aa11.53□□□□□ -0.56
PABPC4-202ENST00000372857 UBE2D4Q9Y2X8 147 aa11.53□□□□□ -0.56
PABPC4-202ENST00000372857 FAM19A5Q7Z5A7 132 aaPredicted RBP11.52□□□□□ -0.56
PABPC4-202ENST00000372857 LINC00467Q9BRT7 94 aa11.52□□□□□ -0.57
PABPC4-202ENST00000372857 PIMREGQ9BSJ6 248 aa11.52□□□□□ -0.57
PABPC4-202ENST00000372857 CHCHD7Q9BUK0 85 aa11.52□□□□□ -0.57
PABPC4-202ENST00000372857 K7EMT4 169 aa11.51□□□□□ -0.57
PABPC4-202ENST00000372857 NDUFA7O95182 113 aa11.51□□□□□ -0.57
PABPC4-202ENST00000372857 IGLV1-40P01703 118 aa11.51□□□□□ -0.57
PABPC4-202ENST00000372857 Q8N2B8 174 aa11.51□□□□□ -0.57
PABPC4-202ENST00000372857 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.51□□□□□ -0.57
PABPC4-202ENST00000372857 EDA2RQ9HAV5 297 aa11.51□□□□□ -0.57
PABPC4-202ENST00000372857 KLK5Q9Y337 293 aaPredicted RBP11.5□□□□□ -0.57
PABPC4-202ENST00000372857 K7EQG2 157 aa11.49□□□□□ -0.57
PABPC4-202ENST00000372857 HERVK_113P63121 156 aa11.49□□□□□ -0.57
PABPC4-202ENST00000372857 C3orf22Q8N5N4 141 aa11.49□□□□□ -0.57
PABPC4-202ENST00000372857 LINC00308Q8TCZ7 52 aa11.49□□□□□ -0.57
PABPC4-202ENST00000372857 Q9H8V8 135 aa11.49□□□□□ -0.57
PABPC4-202ENST00000372857 A6NDX4 124 aa11.49□□□□□ -0.57
PABPC4-202ENST00000372857 DAZ2Q13117 558 aaKnown RBP11.49□□□□□ -0.57
PABPC4-202ENST00000372857 DAZ4Q86SG3 579 aaKnown RBP11.49□□□□□ -0.57
PABPC4-202ENST00000372857 DAZ3Q9NR90 486 aaKnown RBP11.49□□□□□ -0.57
PABPC4-202ENST00000372857 ZNF469Q96JG9 3925 aaPredicted RBP11.49□□□□□ -0.57
PABPC4-202ENST00000372857 COX6A2Q02221 97 aa11.49□□□□□ -0.57
PABPC4-202ENST00000372857 NIPBLQ6KC79 2804 aaeCLIP11.48□□□□□ -0.571e-6■■■■□ 23.7
PABPC4-202ENST00000372857 MTORP42345 2549 aa11.48□□□□□ -0.57
PABPC4-202ENST00000372857 ACANP16112 2415 aa11.48□□□□□ -0.57
PABPC4-202ENST00000372857 NDUFA1O15239 70 aa11.48□□□□□ -0.57
PABPC4-202ENST00000372857 C10orf105Q8TEF2 133 aa11.48□□□□□ -0.57
PABPC4-202ENST00000372857 COX7A2LO14548 114 aa11.48□□□□□ -0.57
PABPC4-202ENST00000372857 CIRBPQ14011 172 aaKnown RBP11.48□□□□□ -0.57
PABPC4-202ENST00000372857 TIMM17BO60830 172 aa11.47□□□□□ -0.57
PABPC4-202ENST00000372857 IGHV4-59P01825 116 aa11.47□□□□□ -0.57
PABPC4-202ENST00000372857 SYNJ2BPP57105 145 aa11.47□□□□□ -0.57
PABPC4-202ENST00000372857 C2CD3Q4AC94 2353 aa11.47□□□□□ -0.57
PABPC4-202ENST00000372857 SOSTDC1Q6X4U4 206 aa11.47□□□□□ -0.57
PABPC4-202ENST00000372857 NBPF19A0A087WUL8 3843 aa11.47□□□□□ -0.57
PABPC4-202ENST00000372857 UQCRQO14949 82 aa11.46□□□□□ -0.57
PABPC4-202ENST00000372857 ACYP1P07311 99 aa11.46□□□□□ -0.57
PABPC4-202ENST00000372857 BAALC-AS2P0C853 105 aa11.46□□□□□ -0.58
PABPC4-202ENST00000372857 MSMBP08118 114 aa11.45□□□□□ -0.58
PABPC4-202ENST00000372857 DGAT2L7PQ6IED9 249 aa11.45□□□□□ -0.58
PABPC4-202ENST00000372857 LINC00643Q86TS7 51 aa11.45□□□□□ -0.58
PABPC4-202ENST00000372857 JMJD1CQ15652 2540 aa11.45□□□□□ -0.58
PABPC4-202ENST00000372857 IMUPQ9GZP8 106 aa11.45□□□□□ -0.58
PABPC4-202ENST00000372857 J3KT08 172 aa11.44□□□□□ -0.58
PABPC4-202ENST00000372857 CFHR3Q02985 330 aa11.44□□□□□ -0.58
PABPC4-202ENST00000372857 FAM218AQ96MZ4 157 aa11.44□□□□□ -0.58
PABPC4-202ENST00000372857 CHD6Q8TD26 2715 aa11.44□□□□□ -0.58
PABPC4-202ENST00000372857 F5H768 121 aa11.44□□□□□ -0.58
PABPC4-202ENST00000372857 GAGE2AQ6NT46 116 aa11.43□□□□□ -0.58
PABPC4-202ENST00000372857 Q9HAA7 133 aa11.43□□□□□ -0.58
PABPC4-202ENST00000372857 TIRAPP58753 221 aa11.43□□□□□ -0.58
PABPC4-202ENST00000372857 DEFB112Q30KQ8 113 aa11.43□□□□□ -0.58
PABPC4-202ENST00000372857 LINC00526Q96FQ7 95 aa11.43□□□□□ -0.58
PABPC4-202ENST00000372857 HOXD3P31249 432 aaPredicted RBP11.42□□□□□ -0.58
PABPC4-202ENST00000372857 IGHV3OR16-12A0A075B7B8 117 aa11.42□□□□□ -0.58
PABPC4-202ENST00000372857 RS1O15537 224 aa11.42□□□□□ -0.58
PABPC4-202ENST00000372857 PSMB8P28062 276 aa11.42□□□□□ -0.58
PABPC4-202ENST00000372857 C22orf24Q9Y442 160 aa11.42□□□□□ -0.58
PABPC4-202ENST00000372857 PIK3CD-AS1Q5SR53 167 aa11.41□□□□□ -0.58
PABPC4-202ENST00000372857 TRAV13-1A0A0B4J241 112 aa11.41□□□□□ -0.58
PABPC4-202ENST00000372857 WIPF1O43516 503 aa11.41□□□□□ -0.58
PABPC4-202ENST00000372857 BEAN1Q3B7T3 259 aa11.41□□□□□ -0.58
PABPC4-202ENST00000372857 PRIMA1Q86XR5 153 aa11.41□□□□□ -0.58
PABPC4-202ENST00000372857 DEFB131AP59861 70 aa11.41□□□□□ -0.58
PABPC4-202ENST00000372857 LINC00242Q5T6M2 205 aa11.4□□□□□ -0.58
PABPC4-202ENST00000372857 LRRC75A-AS1Q8N1F1 130 aa11.4□□□□□ -0.58
PABPC4-202ENST00000372857 IGLV5-45A0A087WSX0 123 aa11.4□□□□□ -0.58
PABPC4-202ENST00000372857 NOTCH2Q04721 2471 aa11.4□□□□□ -0.59
PABPC4-202ENST00000372857 DEFB136Q30KP8 78 aa11.39□□□□□ -0.59
PABPC4-202ENST00000372857 RBMY1BA6NDE4 496 aaKnown RBP11.38□□□□□ -0.59
PABPC4-202ENST00000372857 RBMY1EA6NEQ0 496 aaKnown RBP11.38□□□□□ -0.59
PABPC4-202ENST00000372857 RBMY1DP0C7P1 496 aaKnown RBP11.38□□□□□ -0.59
PABPC4-202ENST00000372857 IGLV5-39A0A0G2JS06 123 aa11.38□□□□□ -0.59
PABPC4-202ENST00000372857 SMIM1B2RUZ4 78 aa11.38□□□□□ -0.59
PABPC4-202ENST00000372857 TRACP01848 142 aa11.38□□□□□ -0.59
PABPC4-202ENST00000372857 PEMTQ9UBM1 199 aa11.38□□□□□ -0.59
PABPC4-202ENST00000372857 KRTAP10-9P60411 292 aa11.37□□□□□ -0.59
PABPC4-202ENST00000372857 COX7CP15954 63 aa11.37□□□□□ -0.59
PABPC4-202ENST00000372857 ZNF415Q09FC8 603 aa11.37□□□□□ -0.59
PABPC4-202ENST00000372857 OR13C6PQ8NH95 151 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms