RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 SMIM20Q8N5G0 67 aa10.78□□□□□ -0.68
COL9A2-202ENST00000372748 NACAE9PAV3 2078 aa10.78□□□□□ -0.68
COL9A2-202ENST00000372748 CDKN2A-AS1Q9UH64 79 aa10.78□□□□□ -0.68
COL9A2-202ENST00000372748 NAV2Q8IVL1 2488 aa10.78□□□□□ -0.68
COL9A2-202ENST00000372748 MXRA5Q9NR99 2828 aa10.77□□□□□ -0.68
COL9A2-202ENST00000372748 UBE2D4Q9Y2X8 147 aa10.77□□□□□ -0.69
COL9A2-202ENST00000372748 LINC00467Q9BRT7 94 aa10.77□□□□□ -0.69
COL9A2-202ENST00000372748 CHCHD7Q9BUK0 85 aa10.77□□□□□ -0.69
COL9A2-202ENST00000372748 TINCRA0A1B0GVN0 87 aa10.76□□□□□ -0.69
COL9A2-202ENST00000372748 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.76□□□□□ -0.69
COL9A2-202ENST00000372748 MEIG1Q5JSS6 88 aa10.75□□□□□ -0.69
COL9A2-202ENST00000372748 TLN2Q9Y4G6 2542 aa10.75□□□□□ -0.69
COL9A2-202ENST00000372748 CITED2Q99967 270 aaPredicted RBP10.75□□□□□ -0.69
COL9A2-202ENST00000372748 C2CD3Q4AC94 2353 aa10.75□□□□□ -0.69
COL9A2-202ENST00000372748 HIST2H2BDQ6DRA6 164 aa10.74□□□□□ -0.69
COL9A2-202ENST00000372748 LINC01356Q8N9X3 169 aa10.74□□□□□ -0.69
COL9A2-202ENST00000372748 DEFB136Q30KP8 78 aa10.74□□□□□ -0.69
COL9A2-202ENST00000372748 YAE1D1Q9NRH1 226 aa10.74□□□□□ -0.69
COL9A2-202ENST00000372748 HECTD1Q9ULT8 2610 aa10.74□□□□□ -0.69
COL9A2-202ENST00000372748 HOXD3P31249 432 aaPredicted RBP10.73□□□□□ -0.69
COL9A2-202ENST00000372748 C18orf65Q6ZTR6 163 aa10.73□□□□□ -0.69
COL9A2-202ENST00000372748 TMEM101Q96IK0 257 aa10.73□□□□□ -0.69
COL9A2-202ENST00000372748 NOTCH3Q9UM47 2321 aa10.73□□□□□ -0.69
COL9A2-202ENST00000372748 SPANXA1Q9NS26 97 aa10.72□□□□□ -0.69
COL9A2-202ENST00000372748 GCN1Q92616 2671 aaKnown RBP10.72□□□□□ -0.69
COL9A2-202ENST00000372748 KMT2BQ9UMN6 2715 aaPredicted RBP10.72□□□□□ -0.69
COL9A2-202ENST00000372748 DEFB131AP59861 70 aa10.72□□□□□ -0.69
COL9A2-202ENST00000372748 HERV-K104P63124 156 aa10.72□□□□□ -0.69
COL9A2-202ENST00000372748 COX6A2Q02221 97 aa10.72□□□□□ -0.69
COL9A2-202ENST00000372748 Q9H8V8 135 aa10.72□□□□□ -0.69
COL9A2-202ENST00000372748 MYO9AB2RTY4 2548 aa10.72□□□□□ -0.69
COL9A2-202ENST00000372748 Q8N2B8 174 aa10.71□□□□□ -0.69
COL9A2-202ENST00000372748 FAM240AA0A1B0GVK7 77 aa10.71□□□□□ -0.69
COL9A2-202ENST00000372748 TEX15Q9BXT5 2789 aa10.71□□□□□ -0.7
COL9A2-202ENST00000372748 NDUFA7O95182 113 aa10.71□□□□□ -0.7
COL9A2-202ENST00000372748 SLURP1P55000 103 aa10.7□□□□□ -0.7
COL9A2-202ENST00000372748 DEFB121Q5J5C9 76 aa10.7□□□□□ -0.7
COL9A2-202ENST00000372748 DGAT2L7PQ6IED9 249 aa10.7□□□□□ -0.7
COL9A2-202ENST00000372748 LINC00308Q8TCZ7 52 aa10.7□□□□□ -0.7
COL9A2-202ENST00000372748 ITPR2Q14571 2701 aa10.7□□□□□ -0.7
COL9A2-202ENST00000372748 FAM236AA0A1B0GUQ0 79 aa10.69□□□□□ -0.7
COL9A2-202ENST00000372748 FAM236BA0A1B0GV22 79 aa10.69□□□□□ -0.7
COL9A2-202ENST00000372748 RBMY1BA6NDE4 496 aaKnown RBP10.69□□□□□ -0.7
COL9A2-202ENST00000372748 RBMY1EA6NEQ0 496 aaKnown RBP10.69□□□□□ -0.7
COL9A2-202ENST00000372748 NDUFA1O15239 70 aa10.69□□□□□ -0.7
COL9A2-202ENST00000372748 RBMY1DP0C7P1 496 aaKnown RBP10.69□□□□□ -0.7
COL9A2-202ENST00000372748 VPREB3Q9UKI3 123 aa10.69□□□□□ -0.7
COL9A2-202ENST00000372748 APCP25054 2843 aa10.69□□□□□ -0.7
COL9A2-202ENST00000372748 DSCR9P59020 149 aa10.69□□□□□ -0.7
COL9A2-202ENST00000372748 CIRBPQ14011 172 aaKnown RBP10.69□□□□□ -0.7
COL9A2-202ENST00000372748 MRPL23Q16540 153 aaKnown RBP10.69□□□□□ -0.7
COL9A2-202ENST00000372748 A0A096LNT2 108 aa10.68□□□□□ -0.7
COL9A2-202ENST00000372748 ZNF702PQ9H963 129 aa10.68□□□□□ -0.7
COL9A2-202ENST00000372748 EDA2RQ9HAV5 297 aa10.68□□□□□ -0.7
COL9A2-202ENST00000372748 SOSTDC1Q6X4U4 206 aa10.68□□□□□ -0.7
COL9A2-202ENST00000372748 SMCR5Q8TEV8 140 aa10.68□□□□□ -0.7
COL9A2-202ENST00000372748 TIMM17BO60830 172 aa10.67□□□□□ -0.7
COL9A2-202ENST00000372748 HIST2H2BCQ6DN03 193 aa10.67□□□□□ -0.7
COL9A2-202ENST00000372748 IGHV3OR16-12A0A075B7B8 117 aa10.67□□□□□ -0.7
COL9A2-202ENST00000372748 TRBV7-7A0A0K0K1E9 115 aa10.67□□□□□ -0.7
COL9A2-202ENST00000372748 ZNF469Q96JG9 3925 aaPredicted RBP10.67□□□□□ -0.7
COL9A2-202ENST00000372748 TRAV13-1A0A0B4J241 112 aa10.66□□□□□ -0.7
COL9A2-202ENST00000372748 COX7A2LO14548 114 aa10.66□□□□□ -0.7
COL9A2-202ENST00000372748 LINC01587Q99440 93 aa10.66□□□□□ -0.7
COL9A2-202ENST00000372748 TMEM89A2RUT3 159 aa10.66□□□□□ -0.7
COL9A2-202ENST00000372748 DAZ2Q13117 558 aaKnown RBP10.66□□□□□ -0.7
COL9A2-202ENST00000372748 KHDC1LQ5JSQ8 128 aa10.66□□□□□ -0.7
COL9A2-202ENST00000372748 LINC00242Q5T6M2 205 aa10.66□□□□□ -0.7
COL9A2-202ENST00000372748 DAZ4Q86SG3 579 aaKnown RBP10.66□□□□□ -0.7
COL9A2-202ENST00000372748 UBE2E2Q96LR5 201 aa10.66□□□□□ -0.7
COL9A2-202ENST00000372748 FAM110AQ9BQ89 295 aa10.66□□□□□ -0.7
COL9A2-202ENST00000372748 DAZ3Q9NR90 486 aaKnown RBP10.66□□□□□ -0.7
COL9A2-202ENST00000372748 LINC00694P0DN24 101 aa10.65□□□□□ -0.7
COL9A2-202ENST00000372748 ZNF415Q09FC8 603 aa10.65□□□□□ -0.7
COL9A2-202ENST00000372748 Q6YL49 198 aa10.65□□□□□ -0.7
COL9A2-202ENST00000372748 KRTAP10-9P60411 292 aa10.65□□□□□ -0.7
COL9A2-202ENST00000372748 WNK1Q9H4A3 2382 aa10.65□□□□□ -0.71
COL9A2-202ENST00000372748 SONP18583 2426 aaKnown RBP10.64□□□□□ -0.71
COL9A2-202ENST00000372748 PRIMA1Q86XR5 153 aa10.64□□□□□ -0.71
COL9A2-202ENST00000372748 IGHV3-53P01767 116 aa10.64□□□□□ -0.71
COL9A2-202ENST00000372748 TIRAPP58753 221 aa10.64□□□□□ -0.71
COL9A2-202ENST00000372748 IGLV5-45A0A087WSX0 123 aa10.63□□□□□ -0.71
COL9A2-202ENST00000372748 PIK3CD-AS1Q5SR53 167 aa10.63□□□□□ -0.71
COL9A2-202ENST00000372748 FAM218AQ96MZ4 157 aa10.63□□□□□ -0.71
COL9A2-202ENST00000372748 J3QLI3 93 aa10.63□□□□□ -0.71
COL9A2-202ENST00000372748 RNF152Q8N8N0 203 aa10.63□□□□□ -0.71
COL9A2-202ENST00000372748 ACANP16112 2415 aa10.63□□□□□ -0.71
COL9A2-202ENST00000372748 BAALC-AS2P0C853 105 aa10.63□□□□□ -0.71
COL9A2-202ENST00000372748 IGHV4-31P0DP07 118 aa10.63□□□□□ -0.71
COL9A2-202ENST00000372748 SMIM1B2RUZ4 78 aa10.62□□□□□ -0.71
COL9A2-202ENST00000372748 C11orf72Q8NBR9 251 aa10.62□□□□□ -0.71
COL9A2-202ENST00000372748 Q9HAA7 133 aa10.62□□□□□ -0.71
COL9A2-202ENST00000372748 IGLV5-39A0A0G2JS06 123 aa10.62□□□□□ -0.71
COL9A2-202ENST00000372748 HERVK_113P63121 156 aa10.61□□□□□ -0.71
COL9A2-202ENST00000372748 CR1P17927 2039 aa10.61□□□□□ -0.71
COL9A2-202ENST00000372748 ACYP1P07311 99 aa10.6□□□□□ -0.71
COL9A2-202ENST00000372748 BEAN1Q3B7T3 259 aa10.59□□□□□ -0.71
COL9A2-202ENST00000372748 C22orf24Q9Y442 160 aa10.59□□□□□ -0.71
COL9A2-202ENST00000372748 DNAJC30Q96LL9 226 aa10.59□□□□□ -0.71
COL9A2-202ENST00000372748 XCL2Q9UBD3 114 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms