RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 TIMM17AQ99595 171 aa3.96□□□□□ -1.78
ATG4A-204ENST00000372246 PRO0628Q9UI54 55 aa3.96□□□□□ -1.78
ATG4A-204ENST00000372246 IGHV4OR15-8A0A075B7B6 117 aa3.95□□□□□ -1.78
ATG4A-204ENST00000372246 A0A087WW49 117 aa3.95□□□□□ -1.78
ATG4A-204ENST00000372246 A0A0B4J2C4 111 aa3.95□□□□□ -1.78
ATG4A-204ENST00000372246 TINCRA0A1B0GVN0 87 aa3.95□□□□□ -1.78
ATG4A-204ENST00000372246 NPFFO15130 113 aa3.95□□□□□ -1.78
ATG4A-204ENST00000372246 COX6A2Q02221 97 aa3.95□□□□□ -1.78
ATG4A-204ENST00000372246 TMEM141Q96I45 108 aa3.95□□□□□ -1.78
ATG4A-204ENST00000372246 CDKN2A-AS1Q9UH64 79 aa3.95□□□□□ -1.78
ATG4A-204ENST00000372246 V9GYY9 64 aa3.95□□□□□ -1.78
ATG4A-204ENST00000372246 IGHV1-69DA0A0B4J2H0 117 aa3.95□□□□□ -1.78
ATG4A-204ENST00000372246 OVOL1O14753 267 aa3.95□□□□□ -1.78
ATG4A-204ENST00000372246 TIRAPP58753 221 aa3.95□□□□□ -1.78
ATG4A-204ENST00000372246 ADORA2A-AS1P86434 159 aa3.95□□□□□ -1.78
ATG4A-204ENST00000372246 FAM218AQ96MZ4 157 aa3.95□□□□□ -1.78
ATG4A-204ENST00000372246 TLN2Q9Y4G6 2542 aa3.95□□□□□ -1.78
ATG4A-204ENST00000372246 SONP18583 2426 aaKnown RBP3.95□□□□□ -1.78
ATG4A-204ENST00000372246 MYO9AB2RTY4 2548 aa3.94□□□□□ -1.78
ATG4A-204ENST00000372246 A0A1W2PRX2 142 aa3.94□□□□□ -1.78
ATG4A-204ENST00000372246 KLLNB2CW77 178 aa3.94□□□□□ -1.78
ATG4A-204ENST00000372246 H3BUX3 64 aa3.94□□□□□ -1.78
ATG4A-204ENST00000372246 CFHR3Q02985 330 aa3.94□□□□□ -1.78
ATG4A-204ENST00000372246 PIK3CD-AS1Q5SR53 167 aa3.94□□□□□ -1.78
ATG4A-204ENST00000372246 C11orf71Q6IPW1 123 aa3.94□□□□□ -1.78
ATG4A-204ENST00000372246 SOSTDC1Q6X4U4 206 aa3.94□□□□□ -1.78
ATG4A-204ENST00000372246 MRPL53Q96EL3 112 aaKnown RBP3.94□□□□□ -1.78
ATG4A-204ENST00000372246 LINC00467Q9BRT7 94 aa3.94□□□□□ -1.78
ATG4A-204ENST00000372246 ZNF469Q96JG9 3925 aaPredicted RBP3.94□□□□□ -1.78
ATG4A-204ENST00000372246 TRBV30A0A0K0K1B3 111 aa3.94□□□□□ -1.78
ATG4A-204ENST00000372246 RHOHQ15669 191 aa3.94□□□□□ -1.78
ATG4A-204ENST00000372246 DCANP1Q8TF63 244 aa3.94□□□□□ -1.78
ATG4A-204ENST00000372246 C1orf43Q9BWL3 253 aa3.94□□□□□ -1.78
ATG4A-204ENST00000372246 EPG5Q9HCE0 2579 aa3.94□□□□□ -1.78
ATG4A-204ENST00000372246 USP9XQ93008 2570 aaPredicted RBP3.94□□□□□ -1.78
ATG4A-204ENST00000372246 A0A087WVE0 104 aa3.93□□□□□ -1.78
ATG4A-204ENST00000372246 LMO4P61968 165 aa3.93□□□□□ -1.78
ATG4A-204ENST00000372246 PAPPA-AS1Q5QFB9 102 aa3.93□□□□□ -1.78
ATG4A-204ENST00000372246 TMEM61Q8N0U2 210 aa3.93□□□□□ -1.78
ATG4A-204ENST00000372246 MAPK1IP1LQ8NDC0 245 aa3.93□□□□□ -1.78
ATG4A-204ENST00000372246 MINOS1-NBL1R4GNA1 71 aa3.93□□□□□ -1.78
ATG4A-204ENST00000372246 CFAP46Q8IYW2 2715 aa3.93□□□□□ -1.78
ATG4A-204ENST00000372246 TRAV13-1A0A0B4J241 112 aa3.93□□□□□ -1.78
ATG4A-204ENST00000372246 IGKV3OR2-268A0A0C4DH90 116 aa3.93□□□□□ -1.78
ATG4A-204ENST00000372246 LST1O00453 97 aa3.93□□□□□ -1.78
ATG4A-204ENST00000372246 DAZ2Q13117 558 aaKnown RBP3.93□□□□□ -1.78
ATG4A-204ENST00000372246 MIAQ16674 131 aa3.93□□□□□ -1.78
ATG4A-204ENST00000372246 DEFB136Q30KP8 78 aa3.93□□□□□ -1.78
ATG4A-204ENST00000372246 C18orf65Q6ZTR6 163 aa3.93□□□□□ -1.78
ATG4A-204ENST00000372246 DAZ4Q86SG3 579 aaKnown RBP3.93□□□□□ -1.78
ATG4A-204ENST00000372246 DAZ1Q9NQZ3 744 aaKnown RBP3.93□□□□□ -1.78
ATG4A-204ENST00000372246 DAZ3Q9NR90 486 aaKnown RBP3.93□□□□□ -1.78
ATG4A-204ENST00000372246 C22orf24Q9Y442 160 aa3.93□□□□□ -1.78
ATG4A-204ENST00000372246 PTPN13Q12923 2485 aa3.93□□□□□ -1.78
ATG4A-204ENST00000372246 IGHV3OR16-12A0A075B7B8 117 aa3.92□□□□□ -1.78
ATG4A-204ENST00000372246 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.92□□□□□ -1.78
ATG4A-204ENST00000372246 NDUFA4O00483 81 aa3.92□□□□□ -1.78
ATG4A-204ENST00000372246 IGHV3-53P01767 116 aa3.92□□□□□ -1.78
ATG4A-204ENST00000372246 C19orf54Q5BKX5 351 aa3.92□□□□□ -1.78
ATG4A-204ENST00000372246 C9orf153Q5TBE3 101 aa3.92□□□□□ -1.78
ATG4A-204ENST00000372246 SDIM1Q6ZPB5 146 aa3.92□□□□□ -1.78
ATG4A-204ENST00000372246 VSIG2Q96IQ7 327 aa3.92□□□□□ -1.78
ATG4A-204ENST00000372246 C9orf85Q96MD7 179 aa3.92□□□□□ -1.78
ATG4A-204ENST00000372246 PRORYQ9H606 182 aa3.92□□□□□ -1.78
ATG4A-204ENST00000372246 Q9H8V8 135 aa3.92□□□□□ -1.78
ATG4A-204ENST00000372246 IGHV1OR15-1A0A075B7D0 117 aa3.92□□□□□ -1.78
ATG4A-204ENST00000372246 IGHV1-58A0A0C4DH39 117 aa3.92□□□□□ -1.78
ATG4A-204ENST00000372246 IGKV3D-7A0A0C4DH55 119 aa3.92□□□□□ -1.78
ATG4A-204ENST00000372246 C19orf84I3L1E1 186 aa3.92□□□□□ -1.78
ATG4A-204ENST00000372246 K7ENP7 123 aa3.92□□□□□ -1.78
ATG4A-204ENST00000372246 GAGE2AQ6NT46 116 aa3.92□□□□□ -1.78
ATG4A-204ENST00000372246 TMEM86BQ8N661 226 aa3.92□□□□□ -1.78
ATG4A-204ENST00000372246 EDA2RQ9HAV5 297 aa3.92□□□□□ -1.78
ATG4A-204ENST00000372246 MOB4Q9Y3A3 225 aa3.92□□□□□ -1.78
ATG4A-204ENST00000372246 LENEPQ9Y5L5 61 aa3.92□□□□□ -1.78
ATG4A-204ENST00000372246 IGHV1-69P01742 117 aa3.91□□□□□ -1.78
ATG4A-204ENST00000372246 SLPIP03973 132 aa3.91□□□□□ -1.78
ATG4A-204ENST00000372246 ATP5G1P05496 136 aa3.91□□□□□ -1.78
ATG4A-204ENST00000372246 Q5XG85 94 aa3.91□□□□□ -1.78
ATG4A-204ENST00000372246 LINC00336Q6ZUF6 198 aa3.91□□□□□ -1.78
ATG4A-204ENST00000372246 APRG1Q8IVJ8 170 aa3.91□□□□□ -1.78
ATG4A-204ENST00000372246 WFDC9Q8NEX5 89 aa3.91□□□□□ -1.78
ATG4A-204ENST00000372246 CHCHD7Q9BUK0 85 aa3.91□□□□□ -1.78
ATG4A-204ENST00000372246 TEX15Q9BXT5 2789 aa3.91□□□□□ -1.78
ATG4A-204ENST00000372246 IGHV4-61A0A0C4DH41 118 aa3.91□□□□□ -1.78
ATG4A-204ENST00000372246 A0A0J9YX75 114 aa3.91□□□□□ -1.78
ATG4A-204ENST00000372246 TRBV6-5A0A0K0K1A5 114 aa3.91□□□□□ -1.78
ATG4A-204ENST00000372246 hADV29S1A0JD25 119 aa3.91□□□□□ -1.78
ATG4A-204ENST00000372246 PPP1R17O96001 155 aa3.91□□□□□ -1.78
ATG4A-204ENST00000372246 PLA2G2AP14555 144 aa3.91□□□□□ -1.78
ATG4A-204ENST00000372246 HERVK_113P63121 156 aa3.91□□□□□ -1.78
ATG4A-204ENST00000372246 MRPS36P82909 103 aaKnown RBP3.91□□□□□ -1.78
ATG4A-204ENST00000372246 UBE2D4Q9Y2X8 147 aa3.91□□□□□ -1.78
ATG4A-204ENST00000372246 SETXQ7Z333 2677 aaKnown RBP3.91□□□□□ -1.78
ATG4A-204ENST00000372246 RBMY1BA6NDE4 496 aaKnown RBP3.9□□□□□ -1.78
ATG4A-204ENST00000372246 RBMY1EA6NEQ0 496 aaKnown RBP3.9□□□□□ -1.78
ATG4A-204ENST00000372246 FAM223BA6NKX1 122 aa3.9□□□□□ -1.78
ATG4A-204ENST00000372246 COX6CP09669 75 aa3.9□□□□□ -1.78
ATG4A-204ENST00000372246 RBMY1DP0C7P1 496 aaKnown RBP3.9□□□□□ -1.78
ATG4A-204ENST00000372246 MED14OSP0DP75 135 aa3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 138.2 ms