RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 UFSP1Q6NVU6 142 aa7.26□□□□□ -1.25
COL4A6-202ENST00000372216 MBD6Q96DN6 1003 aa7.26□□□□□ -1.25
COL4A6-202ENST00000372216 FREM1Q5H8C1 2179 aa7.26□□□□□ -1.25
COL4A6-202ENST00000372216 FXYD2P54710 66 aa7.26□□□□□ -1.25
COL4A6-202ENST00000372216 ABCA1O95477 2261 aa7.26□□□□□ -1.25
COL4A6-202ENST00000372216 H3BQ85 93 aa7.26□□□□□ -1.25
COL4A6-202ENST00000372216 DSCAMO60469 2012 aa7.26□□□□□ -1.25
COL4A6-202ENST00000372216 ARHGAP21Q5T5U3 1957 aa7.26□□□□□ -1.25
COL4A6-202ENST00000372216 PTH2Q96A98 100 aa7.25□□□□□ -1.25
COL4A6-202ENST00000372216 H7C423 109 aa7.25□□□□□ -1.25
COL4A6-202ENST00000372216 AVPP01185 164 aa7.25□□□□□ -1.25
COL4A6-202ENST00000372216 POM121L12Q8N7R1 296 aa7.25□□□□□ -1.25
COL4A6-202ENST00000372216 IGLV1-40P01703 118 aa7.25□□□□□ -1.25
COL4A6-202ENST00000372216 IGLC6P0CF74 106 aa7.25□□□□□ -1.25
COL4A6-202ENST00000372216 ODF1Q14990 250 aa7.25□□□□□ -1.25
COL4A6-202ENST00000372216 Q6ZVQ6 151 aa7.25□□□□□ -1.25
COL4A6-202ENST00000372216 Q6Q795 121 aa7.25□□□□□ -1.25
COL4A6-202ENST00000372216 ENHOQ6UWT2 76 aa7.25□□□□□ -1.25
COL4A6-202ENST00000372216 A8MZ25 164 aa7.24□□□□□ -1.25
COL4A6-202ENST00000372216 FAM30AQ9NZY2 134 aa7.24□□□□□ -1.25
COL4A6-202ENST00000372216 SYCNQ0VAF6 134 aa7.24□□□□□ -1.25
COL4A6-202ENST00000372216 PCNX3Q9H6A9 2034 aa7.24□□□□□ -1.25
COL4A6-202ENST00000372216 WFDC2Q14508 124 aa7.24□□□□□ -1.25
COL4A6-202ENST00000372216 NDUFA7O95182 113 aa7.24□□□□□ -1.25
COL4A6-202ENST00000372216 SPTAN1Q13813 2472 aaKnown RBP7.23□□□□□ -1.25
COL4A6-202ENST00000372216 COL5A1P20908 1838 aaPredicted RBP7.23□□□□□ -1.25
COL4A6-202ENST00000372216 PLCE1Q9P212 2302 aa7.23□□□□□ -1.25
COL4A6-202ENST00000372216 JMJD7-PLA2G4BH0Y9G9 81 aa7.23□□□□□ -1.25
COL4A6-202ENST00000372216 COA6Q5JTJ3 125 aaKnown RBP7.23□□□□□ -1.25
COL4A6-202ENST00000372216 A0A0U1RQV1 116 aa7.23□□□□□ -1.25
COL4A6-202ENST00000372216 A0A1B0GXF2 115 aa7.23□□□□□ -1.25
COL4A6-202ENST00000372216 TRBV6-8A0A0A6YYG3 113 aa7.23□□□□□ -1.25
COL4A6-202ENST00000372216 SPINK1P00995 79 aa7.23□□□□□ -1.25
COL4A6-202ENST00000372216 TDRG1Q3Y452 100 aa7.23□□□□□ -1.25
COL4A6-202ENST00000372216 TRBV6-4A0A1B0GX49 114 aa7.22□□□□□ -1.25
COL4A6-202ENST00000372216 PTPRQQ9UMZ3 2332 aa7.22□□□□□ -1.25
COL4A6-202ENST00000372216 KIR2DL5BA0A0G2JN68 375 aa7.22□□□□□ -1.25
COL4A6-202ENST00000372216 KIR2DL5BA0A0G2JPC4 375 aa7.22□□□□□ -1.25
COL4A6-202ENST00000372216 KIR2DL5AQ8N109 375 aa7.22□□□□□ -1.25
COL4A6-202ENST00000372216 FAM208BQ5VWN6 2430 aa7.22□□□□□ -1.25
COL4A6-202ENST00000372216 SERP1Q9Y6X1 66 aa7.22□□□□□ -1.25
COL4A6-202ENST00000372216 NCOA6Q14686 2063 aaPredicted RBP7.21□□□□□ -1.25
COL4A6-202ENST00000372216 ATOX1O00244 68 aa7.21□□□□□ -1.25
COL4A6-202ENST00000372216 CRIP1P50238 77 aa7.21□□□□□ -1.26
COL4A6-202ENST00000372216 HIGD1BQ9P298 99 aa7.21□□□□□ -1.26
COL4A6-202ENST00000372216 MIAQ16674 131 aa7.21□□□□□ -1.26
COL4A6-202ENST00000372216 M0QY20 66 aa7.2□□□□□ -1.26
COL4A6-202ENST00000372216 SNURFQ9Y675 71 aa7.2□□□□□ -1.26
COL4A6-202ENST00000372216 J3KT08 172 aa7.2□□□□□ -1.26
COL4A6-202ENST00000372216 SPANXDQ9BXN6 97 aa7.2□□□□□ -1.26
COL4A6-202ENST00000372216 SPANXCQ9NY87 97 aa7.2□□□□□ -1.26
COL4A6-202ENST00000372216 CCKP06307 115 aa7.2□□□□□ -1.26
COL4A6-202ENST00000372216 TEN1Q86WV5 123 aa7.2□□□□□ -1.26
COL4A6-202ENST00000372216 ZNF706Q9Y5V0 76 aaPredicted RBP7.2□□□□□ -1.26
COL4A6-202ENST00000372216 A0A0J9YXY3 114 aa7.19□□□□□ -1.26
COL4A6-202ENST00000372216 TANC2Q9HCD6 1990 aa7.19□□□□□ -1.26
COL4A6-202ENST00000372216 EDN2P20800 178 aa7.19□□□□□ -1.26
COL4A6-202ENST00000372216 CDKN2A-AS1Q9UH64 79 aa7.19□□□□□ -1.26
COL4A6-202ENST00000372216 LINC01556Q5JQF7 62 aa7.19□□□□□ -1.26
COL4A6-202ENST00000372216 IGLV4-3A0A075B6K6 122 aa7.19□□□□□ -1.26
COL4A6-202ENST00000372216 LOC107984640A0A0U1RRK4 108 aa7.19□□□□□ -1.26
COL4A6-202ENST00000372216 TCL1BO95988 128 aa7.19□□□□□ -1.26
COL4A6-202ENST00000372216 FSHBP01225 129 aa7.19□□□□□ -1.26
COL4A6-202ENST00000372216 MED13LQ71F56 2210 aa7.19□□□□□ -1.26
COL4A6-202ENST00000372216 DSCAML1Q8TD84 2053 aa7.19□□□□□ -1.26
COL4A6-202ENST00000372216 HIVEP2P31629 2446 aa7.19□□□□□ -1.26
COL4A6-202ENST00000372216 SPATA12Q7Z6I5 190 aa7.18□□□□□ -1.26
COL4A6-202ENST00000372216 PRR9Q5T870 116 aa7.18□□□□□ -1.26
COL4A6-202ENST00000372216 KIAA1549Q9HCM3 1950 aa7.18□□□□□ -1.26
COL4A6-202ENST00000372216 C1orf137Q5JT78 98 aa7.18□□□□□ -1.26
COL4A6-202ENST00000372216 C6orf99Q4VX62 202 aa7.18□□□□□ -1.26
COL4A6-202ENST00000372216 PRYO14603 147 aa7.17□□□□□ -1.26
COL4A6-202ENST00000372216 PLA2G1BP04054 148 aaKnown RBP7.17□□□□□ -1.26
COL4A6-202ENST00000372216 PRR15LQ9BU68 103 aa7.17□□□□□ -1.26
COL4A6-202ENST00000372216 TMEM223A0PJW6 202 aa7.17□□□□□ -1.26
COL4A6-202ENST00000372216 ESRGQ1W209 222 aa7.17□□□□□ -1.26
COL4A6-202ENST00000372216 RNF185Q96GF1 192 aa7.17□□□□□ -1.26
COL4A6-202ENST00000372216 OTOGLQ3ZCN5 2332 aa7.17□□□□□ -1.26
COL4A6-202ENST00000372216 IGHV6-1A0A0B4J1U7 121 aa7.17□□□□□ -1.26
COL4A6-202ENST00000372216 A0A1W2PPR1 153 aa7.17□□□□□ -1.26
COL4A6-202ENST00000372216 M0QXV9 152 aa7.17□□□□□ -1.26
COL4A6-202ENST00000372216 XGP55808 180 aa7.16□□□□□ -1.26
COL4A6-202ENST00000372216 C20orf197Q8N268 126 aa7.16□□□□□ -1.26
COL4A6-202ENST00000372216 EP400Q96L91 3159 aa7.16□□□□□ -1.26
COL4A6-202ENST00000372216 NDUFV3P56181 108 aaKnown RBP7.16□□□□□ -1.26
COL4A6-202ENST00000372216 SHANK1Q9Y566 2161 aa7.16□□□□□ -1.26
COL4A6-202ENST00000372216 TAX1BP3O14907 124 aa7.16□□□□□ -1.26
COL4A6-202ENST00000372216 LELP1Q5T871 98 aa7.16□□□□□ -1.26
COL4A6-202ENST00000372216 RNASE3P12724 160 aaKnown RBP7.16□□□□□ -1.26
COL4A6-202ENST00000372216 ADAMTS20P59510 1910 aa7.15□□□□□ -1.26
COL4A6-202ENST00000372216 C16orf95Q9H693 158 aa7.15□□□□□ -1.26
COL4A6-202ENST00000372216 U3KQK5 164 aa7.15□□□□□ -1.26
COL4A6-202ENST00000372216 RAI1Q7Z5J4 1906 aaPredicted RBP7.15□□□□□ -1.26
COL4A6-202ENST00000372216 ZNF22P17026 224 aaPredicted RBP7.15□□□□□ -1.26
COL4A6-202ENST00000372216 DEFB116Q30KQ4 102 aa7.15□□□□□ -1.26
COL4A6-202ENST00000372216 RNASE8Q8TDE3 154 aaKnown RBP7.15□□□□□ -1.26
COL4A6-202ENST00000372216 IGLV4-69A0A075B6H9 119 aa7.15□□□□□ -1.27
COL4A6-202ENST00000372216 RBX1P62877 108 aa7.15□□□□□ -1.27
COL4A6-202ENST00000372216 C10orf25Q5T742 122 aa7.15□□□□□ -1.27
COL4A6-202ENST00000372216 KLLNB2CW77 178 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 147.1 ms