RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 LENEPQ9Y5L5 61 aa8.8□□□□□ -1
PTPN1-201ENST00000371621 PROK1P58294 105 aa8.8□□□□□ -1
PTPN1-201ENST00000371621 XCL2Q9UBD3 114 aa8.8□□□□□ -1
PTPN1-201ENST00000371621 FAM215AQ9Y5M1 114 aa8.8□□□□□ -1
PTPN1-201ENST00000371621 DCHS1Q96JQ0 3298 aa8.8□□□□□ -1
PTPN1-201ENST00000371621 IGHV4-4A0A075B6R2 117 aa8.8□□□□□ -1
PTPN1-201ENST00000371621 PIEZO1Q92508 2521 aa8.79□□□□□ -1
PTPN1-201ENST00000371621 TRGV4A0A0C4DH28 118 aa8.79□□□□□ -1
PTPN1-201ENST00000371621 SPTSSBQ8NFR3 76 aa8.79□□□□□ -1
PTPN1-201ENST00000371621 F8WEM9 126 aa8.79□□□□□ -1
PTPN1-201ENST00000371621 SBSPONQ8IVN8 264 aa8.79□□□□□ -1
PTPN1-201ENST00000371621 DKK4Q9UBT3 224 aa8.79□□□□□ -1
PTPN1-201ENST00000371621 PRO0628Q9UI54 55 aa8.79□□□□□ -1
PTPN1-201ENST00000371621 F8P00451 2351 aa8.79□□□□□ -1
PTPN1-201ENST00000371621 IGHV1-69P01742 117 aa8.79□□□□□ -1
PTPN1-201ENST00000371621 CXCL5P42830 114 aa8.79□□□□□ -1
PTPN1-201ENST00000371621 C20orf173Q96LM9 149 aa8.79□□□□□ -1
PTPN1-201ENST00000371621 RETNQ9HD89 108 aa8.79□□□□□ -1
PTPN1-201ENST00000371621 CLPSL1A2RUU4 121 aa8.78□□□□□ -1
PTPN1-201ENST00000371621 C11orf44Q8N8P7 122 aa8.78□□□□□ -1
PTPN1-201ENST00000371621 NDUFC2-KCTD14E9PQ53 114 aa8.78□□□□□ -1
PTPN1-201ENST00000371621 H0YGX0 51 aa8.78□□□□□ -1
PTPN1-201ENST00000371621 ZFAND2AQ8N6M9 145 aa8.78□□□□□ -1
PTPN1-201ENST00000371621 MRPL53Q96EL3 112 aaKnown RBP8.78□□□□□ -1
PTPN1-201ENST00000371621 H3BUX3 64 aa8.78□□□□□ -1
PTPN1-201ENST00000371621 MINOS1-NBL1R4GNA1 71 aa8.78□□□□□ -1
PTPN1-201ENST00000371621 TSHBP01222 138 aa8.77□□□□□ -1
PTPN1-201ENST00000371621 POLR2KP53803 58 aaKnown RBP8.77□□□□□ -1
PTPN1-201ENST00000371621 FAM19A1Q7Z5A9 133 aa8.77□□□□□ -1
PTPN1-201ENST00000371621 KAAG1Q9UBP8 84 aa8.77□□□□□ -1
PTPN1-201ENST00000371621 C10orf142B7Z368 130 aa8.77□□□□□ -1.01
PTPN1-201ENST00000371621 RNASE3P12724 160 aaKnown RBP8.77□□□□□ -1.01
PTPN1-201ENST00000371621 HIVEP3Q5T1R4 2406 aa8.77□□□□□ -1.01
PTPN1-201ENST00000371621 LINC00846Q9NV44 126 aa8.77□□□□□ -1.01
PTPN1-201ENST00000371621 PRM2P04554 102 aa8.76□□□□□ -1.01
PTPN1-201ENST00000371621 CRYGAP11844 174 aa8.76□□□□□ -1.01
PTPN1-201ENST00000371621 FAM19A4Q96LR4 140 aa8.76□□□□□ -1.01
PTPN1-201ENST00000371621 IGF2RP11717 2491 aa8.76□□□□□ -1.01
PTPN1-201ENST00000371621 IGHV4-28A0A0C4DH34 117 aa8.76□□□□□ -1.01
PTPN1-201ENST00000371621 FAM223BA6NKX1 122 aa8.75□□□□□ -1.01
PTPN1-201ENST00000371621 PRR4Q16378 134 aa8.75□□□□□ -1.01
PTPN1-201ENST00000371621 LINC00574Q9H8X3 128 aa8.75□□□□□ -1.01
PTPN1-201ENST00000371621 SMIM26A0A096LP01 95 aa8.75□□□□□ -1.01
PTPN1-201ENST00000371621 TRBV27A0A0K0K1C4 114 aa8.75□□□□□ -1.01
PTPN1-201ENST00000371621 XCL1P47992 114 aa8.75□□□□□ -1.01
PTPN1-201ENST00000371621 ZFYVE26Q68DK2 2539 aa8.74□□□□□ -1.01
PTPN1-201ENST00000371621 M0QY20 66 aa8.74□□□□□ -1.01
PTPN1-201ENST00000371621 SEM1Q6ZVN7 128 aa8.74□□□□□ -1.01
PTPN1-201ENST00000371621 GPHB5Q86YW7 130 aa8.74□□□□□ -1.01
PTPN1-201ENST00000371621 LINC00467Q9BRT7 94 aa8.74□□□□□ -1.01
PTPN1-201ENST00000371621 EDN2P20800 178 aa8.74□□□□□ -1.01
PTPN1-201ENST00000371621 LINC00336Q6ZUF6 198 aa8.74□□□□□ -1.01
PTPN1-201ENST00000371621 NDUFA4O00483 81 aa8.73□□□□□ -1.01
PTPN1-201ENST00000371621 Q8N9W7 124 aa8.73□□□□□ -1.01
PTPN1-201ENST00000371621 CCDC140Q96MF4 163 aa8.73□□□□□ -1.01
PTPN1-201ENST00000371621 SMCR5Q8TEV8 140 aa8.73□□□□□ -1.01
PTPN1-201ENST00000371621 RPS28P62857 69 aaKnown RBP8.73□□□□□ -1.01
PTPN1-201ENST00000371621 ATMQ13315 3056 aa8.73□□□□□ -1.01
PTPN1-201ENST00000371621 MRPL55Q7Z7F7 128 aaKnown RBP8.72□□□□□ -1.01
PTPN1-201ENST00000371621 NCOR2Q9Y618 2525 aa8.72□□□□□ -1.01
PTPN1-201ENST00000371621 TNFRSF13BO14836 293 aaPredicted RBP8.72□□□□□ -1.01
PTPN1-201ENST00000371621 STHQ8IWL8 128 aa8.72□□□□□ -1.01
PTPN1-201ENST00000371621 RMI2Q96E14 147 aa8.72□□□□□ -1.01
PTPN1-201ENST00000371621 A0A096LPF7 62 aa8.72□□□□□ -1.01
PTPN1-201ENST00000371621 A0A1W2PRX2 142 aa8.72□□□□□ -1.01
PTPN1-201ENST00000371621 JMJD7-PLA2G4BH0Y9G9 81 aa8.72□□□□□ -1.01
PTPN1-201ENST00000371621 Q8N2B8 174 aa8.72□□□□□ -1.01
PTPN1-201ENST00000371621 DMXL1Q9Y485 3027 aa8.71□□□□□ -1.01
PTPN1-201ENST00000371621 NPBQ8NG41 125 aa8.71□□□□□ -1.01
PTPN1-201ENST00000371621 EBI3Q14213 229 aa8.7□□□□□ -1.02
PTPN1-201ENST00000371621 MUC6Q6W4X9 2439 aa8.7□□□□□ -1.02
PTPN1-201ENST00000371621 USMG5Q96IX5 58 aa8.7□□□□□ -1.02
PTPN1-201ENST00000371621 BPESC1Q9GZL8 116 aa8.7□□□□□ -1.02
PTPN1-201ENST00000371621 SERP1Q9Y6X1 66 aa8.7□□□□□ -1.02
PTPN1-201ENST00000371621 DEFB130BP0DP73 79 aa8.7□□□□□ -1.02
PTPN1-201ENST00000371621 DEFB130AP0DP74 79 aa8.7□□□□□ -1.02
PTPN1-201ENST00000371621 HTN3P15516 51 aa8.7□□□□□ -1.02
PTPN1-201ENST00000371621 ZFAND3Q9H8U3 227 aa8.7□□□□□ -1.02
PTPN1-201ENST00000371621 A0A1W2PNU3 283 aaPredicted RBP8.7□□□□□ -1.02
PTPN1-201ENST00000371621 SMIM11BQ8TCY0 68 aa8.7□□□□□ -1.02
PTPN1-201ENST00000371621 IGHV4OR15-8A0A075B7B6 117 aa8.69□□□□□ -1.02
PTPN1-201ENST00000371621 A0A087WW49 117 aa8.69□□□□□ -1.02
PTPN1-201ENST00000371621 BLCAPP62952 87 aa8.69□□□□□ -1.02
PTPN1-201ENST00000371621 Q6JHZ5 121 aa8.69□□□□□ -1.02
PTPN1-201ENST00000371621 PRO3102Q9H379 93 aa8.69□□□□□ -1.02
PTPN1-201ENST00000371621 MUC4Q99102 2169 aa8.69□□□□□ -1.02
PTPN1-201ENST00000371621 ABCA12Q86UK0 2595 aa8.69□□□□□ -1.02
PTPN1-201ENST00000371621 A0A087WYN8 130 aa8.69□□□□□ -1.02
PTPN1-201ENST00000371621 PRORYQ9H606 182 aa8.69□□□□□ -1.02
PTPN1-201ENST00000371621 NAV2Q8IVL1 2488 aa8.68□□□□□ -1.02
PTPN1-201ENST00000371621 IGLV10-54A0A075B6I4 117 aa8.68□□□□□ -1.02
PTPN1-201ENST00000371621 FHL2Q14192 279 aa8.68□□□□□ -1.02
PTPN1-201ENST00000371621 NDUFA1O15239 70 aa8.67□□□□□ -1.02
PTPN1-201ENST00000371621 FUSP35637 526 aaKnown RBP eCLIP8.67□□□□□ -1.02
PTPN1-201ENST00000371621 PIP4P1Q86T03 277 aa8.67□□□□□ -1.02
PTPN1-201ENST00000371621 TMEM256-PLSCR3K7ERE1 68 aa8.67□□□□□ -1.02
PTPN1-201ENST00000371621 MED14OSP0DP75 135 aa8.67□□□□□ -1.02
PTPN1-201ENST00000371621 DEFB105AQ8NG35 78 aa8.67□□□□□ -1.02
PTPN1-201ENST00000371621 DMXL2Q8TDJ6 3036 aa8.66□□□□□ -1.02
PTPN1-201ENST00000371621 GRNP28799 593 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms