RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 CDKN2A-AS1Q9UH64 79 aa10.88□□□□□ -0.67
NDC1-201ENST00000371429 HIGD1BQ9P298 99 aa10.88□□□□□ -0.67
NDC1-201ENST00000371429 HCFC1P51610 2035 aa10.88□□□□□ -0.67
NDC1-201ENST00000371429 CDPF1Q6NVV7 123 aa10.87□□□□□ -0.67
NDC1-201ENST00000371429 H3BQ85 93 aa10.87□□□□□ -0.67
NDC1-201ENST00000371429 CRYBA4P53673 196 aa10.87□□□□□ -0.67
NDC1-201ENST00000371429 FXYD2P54710 66 aa10.87□□□□□ -0.67
NDC1-201ENST00000371429 ANKRD29Q8N6D5 301 aa10.87□□□□□ -0.67
NDC1-201ENST00000371429 C9orf153Q5TBE3 101 aa10.87□□□□□ -0.67
NDC1-201ENST00000371429 KLLNB2CW77 178 aa10.87□□□□□ -0.67
NDC1-201ENST00000371429 M0R2N4 97 aa10.87□□□□□ -0.67
NDC1-201ENST00000371429 LY6G6CO95867 125 aa10.86□□□□□ -0.67
NDC1-201ENST00000371429 A0A087WZ39 114 aa10.86□□□□□ -0.67
NDC1-201ENST00000371429 NFE4Q86UQ8 179 aa10.86□□□□□ -0.67
NDC1-201ENST00000371429 RBX1P62877 108 aa10.86□□□□□ -0.67
NDC1-201ENST00000371429 IGLV4-3A0A075B6K6 122 aa10.85□□□□□ -0.67
NDC1-201ENST00000371429 PRM2P04554 102 aa10.85□□□□□ -0.67
NDC1-201ENST00000371429 COX7BP24311 80 aa10.85□□□□□ -0.67
NDC1-201ENST00000371429 LRCOL1A6NCL2 159 aa10.85□□□□□ -0.67
NDC1-201ENST00000371429 ODF3L2Q3SX64 289 aa10.85□□□□□ -0.67
NDC1-201ENST00000371429 A0A0J9YWU9 116 aa10.85□□□□□ -0.67
NDC1-201ENST00000371429 RNASE3P12724 160 aaKnown RBP10.85□□□□□ -0.67
NDC1-201ENST00000371429 MIAQ16674 131 aa10.85□□□□□ -0.67
NDC1-201ENST00000371429 IGLV2-11P01706 119 aa10.84□□□□□ -0.67
NDC1-201ENST00000371429 NREPQ16612 68 aa10.84□□□□□ -0.67
NDC1-201ENST00000371429 PRR9Q5T870 116 aa10.84□□□□□ -0.67
NDC1-201ENST00000371429 CITED1Q99966 193 aa10.84□□□□□ -0.67
NDC1-201ENST00000371429 FLNBO75369 2602 aaKnown RBP10.84□□□□□ -0.67
NDC1-201ENST00000371429 NANOS2P60321 138 aaKnown RBP10.84□□□□□ -0.67
NDC1-201ENST00000371429 SYCNQ0VAF6 134 aa10.84□□□□□ -0.67
NDC1-201ENST00000371429 LINC01620Q4KN68 170 aa10.84□□□□□ -0.67
NDC1-201ENST00000371429 SPANXCQ9NY87 97 aa10.83□□□□□ -0.68
NDC1-201ENST00000371429 IGLV1-51P01701 117 aa10.83□□□□□ -0.68
NDC1-201ENST00000371429 NPSP0C0P6 89 aa10.82□□□□□ -0.68
NDC1-201ENST00000371429 SPATA12Q7Z6I5 190 aa10.82□□□□□ -0.68
NDC1-201ENST00000371429 ACANP16112 2415 aa10.82□□□□□ -0.68
NDC1-201ENST00000371429 GOLGB1Q14789 3259 aaKnown RBP10.82□□□□□ -0.68
NDC1-201ENST00000371429 LELP1Q5T871 98 aa10.82□□□□□ -0.68
NDC1-201ENST00000371429 CLUHP3Q96NS8 147 aa10.82□□□□□ -0.68
NDC1-201ENST00000371429 C11orf21Q9P2W6 132 aa10.82□□□□□ -0.68
NDC1-201ENST00000371429 A0A0J9YXY3 114 aa10.81□□□□□ -0.68
NDC1-201ENST00000371429 LOC100131303A0A0U1RQF7 123 aa10.81□□□□□ -0.68
NDC1-201ENST00000371429 CRIP2P52943 208 aaPredicted RBP10.81□□□□□ -0.68
NDC1-201ENST00000371429 XAGE1AQ9HD64 81 aa10.81□□□□□ -0.68
NDC1-201ENST00000371429 TRBV27A0A0K0K1C4 114 aa10.81□□□□□ -0.68
NDC1-201ENST00000371429 C16orf95Q9H693 158 aa10.81□□□□□ -0.68
NDC1-201ENST00000371429 JMJD7-PLA2G4BH0Y9G9 81 aa10.81□□□□□ -0.68
NDC1-201ENST00000371429 EDN2P20800 178 aa10.81□□□□□ -0.68
NDC1-201ENST00000371429 TRBV6-5A0A0K0K1A5 114 aa10.8□□□□□ -0.68
NDC1-201ENST00000371429 ZNF22P17026 224 aaPredicted RBP10.8□□□□□ -0.68
NDC1-201ENST00000371429 FAM19A1Q7Z5A9 133 aa10.8□□□□□ -0.68
NDC1-201ENST00000371429 MRGPRG-AS1Q2M3A8 158 aa10.8□□□□□ -0.68
NDC1-201ENST00000371429 CLEC2BQ92478 149 aa10.8□□□□□ -0.68
NDC1-201ENST00000371429 RNF185Q96GF1 192 aa10.8□□□□□ -0.68
NDC1-201ENST00000371429 SPANXDQ9BXN6 97 aa10.8□□□□□ -0.68
NDC1-201ENST00000371429 TNRC6BQ9UPQ9 1833 aaKnown RBP10.79□□□□□ -0.68
NDC1-201ENST00000371429 ACYP1P07311 99 aa10.79□□□□□ -0.68
NDC1-201ENST00000371429 RBM3P98179 157 aaKnown RBP10.79□□□□□ -0.68
NDC1-201ENST00000371429 FAM19A5Q7Z5A7 132 aaPredicted RBP10.79□□□□□ -0.68
NDC1-201ENST00000371429 C9orf85Q96MD7 179 aa10.79□□□□□ -0.68
NDC1-201ENST00000371429 C7orf33Q8WU49 177 aa10.78□□□□□ -0.68
NDC1-201ENST00000371429 A0A096LNI7 61 aa10.78□□□□□ -0.68
NDC1-201ENST00000371429 IBA57-AS1B1ANH7 110 aa10.78□□□□□ -0.68
NDC1-201ENST00000371429 RETNQ9HD89 108 aa10.78□□□□□ -0.68
NDC1-201ENST00000371429 TMEM256-PLSCR3K7ERE1 68 aa10.77□□□□□ -0.68
NDC1-201ENST00000371429 CD164L2Q6UWJ8 174 aa10.77□□□□□ -0.68
NDC1-201ENST00000371429 PYGO1Q9Y3Y4 419 aa10.76□□□□□ -0.69
NDC1-201ENST00000371429 ZNF580Q9UK33 172 aa10.76□□□□□ -0.69
NDC1-201ENST00000371429 TSHBP01222 138 aa10.75□□□□□ -0.69
NDC1-201ENST00000371429 TMEM223A0PJW6 202 aa10.75□□□□□ -0.69
NDC1-201ENST00000371429 LINC00526Q96FQ7 95 aa10.75□□□□□ -0.69
NDC1-201ENST00000371429 RAI1Q7Z5J4 1906 aaPredicted RBP10.75□□□□□ -0.69
NDC1-201ENST00000371429 NUPR2A6NF83 97 aa10.74□□□□□ -0.69
NDC1-201ENST00000371429 BRI3O95415 125 aa10.74□□□□□ -0.69
NDC1-201ENST00000371429 U3KQK5 164 aa10.73□□□□□ -0.69
NDC1-201ENST00000371429 PIK3CD-AS1Q5SR53 167 aa10.73□□□□□ -0.69
NDC1-201ENST00000371429 TEN1Q86WV5 123 aa10.73□□□□□ -0.69
NDC1-201ENST00000371429 H0Y9J4 135 aa10.73□□□□□ -0.69
NDC1-201ENST00000371429 TRBV10-2A0A0K0K1G8 114 aa10.72□□□□□ -0.69
NDC1-201ENST00000371429 LINC00959A0A1B0GUT2 108 aa10.72□□□□□ -0.69
NDC1-201ENST00000371429 IGKV2D-26A0A0A0MRZ7 120 aa10.72□□□□□ -0.69
NDC1-201ENST00000371429 H3BT86 120 aa10.72□□□□□ -0.69
NDC1-201ENST00000371429 NRACQ8N912 160 aa10.72□□□□□ -0.69
NDC1-201ENST00000371429 IGKV3D-7A0A0C4DH55 119 aa10.72□□□□□ -0.69
NDC1-201ENST00000371429 A0A1B0GX51 115 aa10.72□□□□□ -0.69
NDC1-201ENST00000371429 PDE6GP18545 87 aa10.72□□□□□ -0.69
NDC1-201ENST00000371429 POLR2KP53803 58 aaKnown RBP10.72□□□□□ -0.69
NDC1-201ENST00000371429 A0A0B4J2C4 111 aa10.72□□□□□ -0.69
NDC1-201ENST00000371429 UBE2D3P61077 147 aa10.72□□□□□ -0.69
NDC1-201ENST00000371429 UBE2D2P62837 147 aa10.72□□□□□ -0.69
NDC1-201ENST00000371429 IGLV4-69A0A075B6H9 119 aa10.71□□□□□ -0.69
NDC1-201ENST00000371429 LINC00308Q8TCZ7 52 aa10.71□□□□□ -0.7
NDC1-201ENST00000371429 MRPS12O15235 138 aaKnown RBP10.71□□□□□ -0.7
NDC1-201ENST00000371429 SPANXB1Q9NS25 103 aaPredicted RBP10.7□□□□□ -0.7
NDC1-201ENST00000371429 MP68P56378 58 aa10.7□□□□□ -0.7
NDC1-201ENST00000371429 WFDC2Q14508 124 aa10.7□□□□□ -0.7
NDC1-201ENST00000371429 UBE2D4Q9Y2X8 147 aa10.7□□□□□ -0.7
NDC1-201ENST00000371429 Q6ZTC4 211 aa10.69□□□□□ -0.7
NDC1-201ENST00000371429 C1orf158Q8N1D5 194 aa10.68□□□□□ -0.7
NDC1-201ENST00000371429 ANKRD17O75179 2603 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms