RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 A0A0J9YXV3 536 aa12.24□□□□□ -0.45
SSBP3-203ENST00000371319 K7EIL1 84 aa12.24□□□□□ -0.45
SSBP3-203ENST00000371319 M0R143 59 aa12.24□□□□□ -0.45
SSBP3-203ENST00000371319 ATP6V0E2Q8NHE4 81 aa12.24□□□□□ -0.45
SSBP3-203ENST00000371319 CHAC1Q9BUX1 264 aa12.24□□□□□ -0.45
SSBP3-203ENST00000371319 TTTY13Q9BZ97 58 aa12.24□□□□□ -0.45
SSBP3-203ENST00000371319 C11orf68Q9H3H3 251 aaKnown RBP12.24□□□□□ -0.45
SSBP3-203ENST00000371319 TRBV6-8A0A0A6YYG3 113 aa12.23□□□□□ -0.45
SSBP3-203ENST00000371319 C12orf74Q32Q52 190 aa12.23□□□□□ -0.45
SSBP3-203ENST00000371319 CSDC2Q9Y534 153 aaKnown RBP12.23□□□□□ -0.45
SSBP3-203ENST00000371319 E9PLD3 99 aa12.22□□□□□ -0.45
SSBP3-203ENST00000371319 H7C423 109 aa12.22□□□□□ -0.45
SSBP3-203ENST00000371319 TMEM97Q5BJF2 176 aa12.22□□□□□ -0.45
SSBP3-203ENST00000371319 A0A0J9YY99 117 aa12.22□□□□□ -0.45
SSBP3-203ENST00000371319 F5H768 121 aa12.22□□□□□ -0.45
SSBP3-203ENST00000371319 DGAT2L7PQ6IED9 249 aa12.22□□□□□ -0.45
SSBP3-203ENST00000371319 MAPKAPK5-AS1Q8N8E1 139 aa12.22□□□□□ -0.45
SSBP3-203ENST00000371319 UBE2L6O14933 153 aa12.21□□□□□ -0.46
SSBP3-203ENST00000371319 ZNF22P17026 224 aaPredicted RBP12.21□□□□□ -0.46
SSBP3-203ENST00000371319 SMAGPQ0VAQ4 97 aa12.21□□□□□ -0.46
SSBP3-203ENST00000371319 TMEM170BQ5T4T1 132 aa12.21□□□□□ -0.46
SSBP3-203ENST00000371319 C2orf88Q9BSF0 95 aa12.21□□□□□ -0.46
SSBP3-203ENST00000371319 TRAV26-1A0A087WT03 109 aa12.2□□□□□ -0.46
SSBP3-203ENST00000371319 UBE2D1P51668 147 aa12.2□□□□□ -0.46
SSBP3-203ENST00000371319 SIVA1O15304 175 aa12.19□□□□□ -0.46
SSBP3-203ENST00000371319 HTN3P15516 51 aa12.19□□□□□ -0.46
SSBP3-203ENST00000371319 HERVK_113P61574 105 aa12.19□□□□□ -0.46
SSBP3-203ENST00000371319 GAGE6Q13070 117 aa12.19□□□□□ -0.46
SSBP3-203ENST00000371319 OR5A1Q8NGJ0 315 aa12.19□□□□□ -0.46
SSBP3-203ENST00000371319 CDC42SE2Q9NRR3 84 aa12.19□□□□□ -0.46
SSBP3-203ENST00000371319 A0A096LPF7 62 aa12.18□□□□□ -0.46
SSBP3-203ENST00000371319 TRAV8-6A0A0B4J262 113 aa12.18□□□□□ -0.46
SSBP3-203ENST00000371319 TINCRA0A1B0GVN0 87 aa12.18□□□□□ -0.46
SSBP3-203ENST00000371319 TMEM223A0PJW6 202 aa12.18□□□□□ -0.46
SSBP3-203ENST00000371319 AMMECR1LQ6DCA0 310 aa12.18□□□□□ -0.46
SSBP3-203ENST00000371319 A0A0J9YWU9 116 aa12.18□□□□□ -0.46
SSBP3-203ENST00000371319 HINT1P49773 126 aaPredicted RBP12.18□□□□□ -0.46
SSBP3-203ENST00000371319 ZNF25P17030 456 aaPredicted RBP12.17□□□□□ -0.46
SSBP3-203ENST00000371319 BATFQ16520 125 aa12.17□□□□□ -0.46
SSBP3-203ENST00000371319 TMEM101Q96IK0 257 aa12.17□□□□□ -0.46
SSBP3-203ENST00000371319 CHCHD5Q9BSY4 110 aa12.17□□□□□ -0.46
SSBP3-203ENST00000371319 LBHQ53QV2 105 aaPredicted RBP12.16□□□□□ -0.46
SSBP3-203ENST00000371319 FAM19A3Q7Z5A8 133 aa12.16□□□□□ -0.46
SSBP3-203ENST00000371319 TM2D3Q9BRN9 247 aa12.16□□□□□ -0.46
SSBP3-203ENST00000371319 TSPEAR-AS2P59090 65 aa12.15□□□□□ -0.46
SSBP3-203ENST00000371319 MPV17L2Q567V2 206 aa12.15□□□□□ -0.46
SSBP3-203ENST00000371319 SPATA25Q9BR10 227 aa12.15□□□□□ -0.46
SSBP3-203ENST00000371319 HIGD1BQ9P298 99 aa12.15□□□□□ -0.46
SSBP3-203ENST00000371319 MYMXA0A1B0GTQ4 84 aa12.14□□□□□ -0.47
SSBP3-203ENST00000371319 TIRAPP58753 221 aa12.14□□□□□ -0.47
SSBP3-203ENST00000371319 DEFB121Q5J5C9 76 aa12.14□□□□□ -0.47
SSBP3-203ENST00000371319 IGLV4-60A0A075B6I1 120 aa12.13□□□□□ -0.47
SSBP3-203ENST00000371319 IGLV5-45A0A087WSX0 123 aa12.13□□□□□ -0.47
SSBP3-203ENST00000371319 LEPROTO15243 131 aa12.13□□□□□ -0.47
SSBP3-203ENST00000371319 MRPL23Q16540 153 aaKnown RBP12.13□□□□□ -0.47
SSBP3-203ENST00000371319 Q6ZTC4 211 aa12.13□□□□□ -0.47
SSBP3-203ENST00000371319 ICOSQ9Y6W8 199 aa12.13□□□□□ -0.47
SSBP3-203ENST00000371319 BVES-AS1Q5T3Y7 98 aa12.13□□□□□ -0.47
SSBP3-203ENST00000371319 LINC00242Q5T6M2 205 aa12.13□□□□□ -0.47
SSBP3-203ENST00000371319 COX6A2Q02221 97 aa12.12□□□□□ -0.47
SSBP3-203ENST00000371319 GEMIN7Q9H840 131 aaKnown RBP12.12□□□□□ -0.47
SSBP3-203ENST00000371319 TRAV13-1A0A0B4J241 112 aa12.11□□□□□ -0.47
SSBP3-203ENST00000371319 HSD52Q0P140 79 aa12.11□□□□□ -0.47
SSBP3-203ENST00000371319 SH2D6Q7Z4S9 175 aa12.11□□□□□ -0.47
SSBP3-203ENST00000371319 LINC00469Q8N7U9 141 aa12.11□□□□□ -0.47
SSBP3-203ENST00000371319 MRAPQ8TCY5 172 aa12.11□□□□□ -0.47
SSBP3-203ENST00000371319 IGHV3-64A0A075B6Q5 118 aa12.1□□□□□ -0.47
SSBP3-203ENST00000371319 ZNF815PA8K554 130 aa12.1□□□□□ -0.47
SSBP3-203ENST00000371319 J3QQQ9 107 aa12.1□□□□□ -0.47
SSBP3-203ENST00000371319 NANOS2P60321 138 aaKnown RBP12.1□□□□□ -0.47
SSBP3-203ENST00000371319 H3BNG1 76 aa12.09□□□□□ -0.47
SSBP3-203ENST00000371319 C11orf45Q8TAV5 145 aa12.09□□□□□ -0.47
SSBP3-203ENST00000371319 CDKN2A-AS1Q9UH64 79 aa12.09□□□□□ -0.47
SSBP3-203ENST00000371319 HUWE1Q7Z6Z7 4374 aaKnown RBP12.09□□□□□ -0.47
SSBP3-203ENST00000371319 A0A1B0GUV1 79 aa12.09□□□□□ -0.47
SSBP3-203ENST00000371319 LGALS3P17931 250 aaKnown RBP12.09□□□□□ -0.47
SSBP3-203ENST00000371319 RBX1P62877 108 aa12.09□□□□□ -0.47
SSBP3-203ENST00000371319 HERVK_113P63121 156 aa12.09□□□□□ -0.47
SSBP3-203ENST00000371319 SEC11AP67812 179 aa12.09□□□□□ -0.47
SSBP3-203ENST00000371319 LURAP1LQ8IV03 231 aa12.09□□□□□ -0.47
SSBP3-203ENST00000371319 PLEKHB2Q96CS7 222 aa12.09□□□□□ -0.47
SSBP3-203ENST00000371319 TRAV8-3A0A0A6YYJ7 113 aa12.08□□□□□ -0.48
SSBP3-203ENST00000371319 IGHV1-58A0A0C4DH39 117 aa12.08□□□□□ -0.48
SSBP3-203ENST00000371319 SPINK8P0C7L1 97 aa12.08□□□□□ -0.48
SSBP3-203ENST00000371319 IGHV3-30-3P0DP02 117 aa12.08□□□□□ -0.48
SSBP3-203ENST00000371319 COL5A1-AS1Q5SY13 56 aa12.08□□□□□ -0.48
SSBP3-203ENST00000371319 TMEM262E9PQX1 116 aa12.07□□□□□ -0.48
SSBP3-203ENST00000371319 H3BRM9 83 aa12.06□□□□□ -0.48
SSBP3-203ENST00000371319 LELP1Q5T871 98 aa12.06□□□□□ -0.48
SSBP3-203ENST00000371319 NOTCH1P46531 2555 aa12.06□□□□□ -0.48
SSBP3-203ENST00000371319 A0A1B0GV90 55 aa12.05□□□□□ -0.48
SSBP3-203ENST00000371319 TENM3Q9P273 2699 aa12.05□□□□□ -0.48
SSBP3-203ENST00000371319 LYPD5Q6UWN5 251 aa12.05□□□□□ -0.48
SSBP3-203ENST00000371319 DEFB131BA0A096LNP1 70 aa12.04□□□□□ -0.48
SSBP3-203ENST00000371319 IGKV3OR2-268A0A0C4DH90 116 aa12.04□□□□□ -0.48
SSBP3-203ENST00000371319 ORAOV1Q8WV07 137 aa12.04□□□□□ -0.48
SSBP3-203ENST00000371319 TAL2Q16559 108 aa12.03□□□□□ -0.48
SSBP3-203ENST00000371319 Q8N3U1 123 aa12.03□□□□□ -0.48
SSBP3-203ENST00000371319 IGLV5-39A0A0G2JS06 123 aa12.02□□□□□ -0.49
SSBP3-203ENST00000371319 LINC00959A0A1B0GUT2 108 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms