RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.75□□□□□ -0.69
LMO4-201ENST00000370542 IGHV3-74A0A0B4J1X5 117 aa10.75□□□□□ -0.69
LMO4-201ENST00000370542 PMVKQ15126 192 aa10.75□□□□□ -0.69
LMO4-201ENST00000370542 TIMM17AQ99595 171 aa10.75□□□□□ -0.69
LMO4-201ENST00000370542 PRO1854Q9UHT4 67 aa10.75□□□□□ -0.69
LMO4-201ENST00000370542 KLK5Q9Y337 293 aaPredicted RBP10.75□□□□□ -0.69
LMO4-201ENST00000370542 A0A0J9YY99 117 aa10.74□□□□□ -0.69
LMO4-201ENST00000370542 MT-ATP8P03928 68 aa10.74□□□□□ -0.69
LMO4-201ENST00000370542 XGP55808 180 aa10.74□□□□□ -0.69
LMO4-201ENST00000370542 NFE4Q86UQ8 179 aa10.74□□□□□ -0.69
LMO4-201ENST00000370542 SLC25A29Q8N8R3 303 aa10.74□□□□□ -0.69
LMO4-201ENST00000370542 U3KQE9 123 aa10.74□□□□□ -0.69
LMO4-201ENST00000370542 IGKV3-7A0A075B6H7 116 aa10.73□□□□□ -0.69
LMO4-201ENST00000370542 A0A0B4J2C4 111 aa10.73□□□□□ -0.69
LMO4-201ENST00000370542 PRAC2D3DTV9 90 aa10.73□□□□□ -0.69
LMO4-201ENST00000370542 LY6G6CO95867 125 aa10.73□□□□□ -0.69
LMO4-201ENST00000370542 RASL10AQ92737 203 aa10.73□□□□□ -0.69
LMO4-201ENST00000370542 CARD19Q96LW7 228 aa10.73□□□□□ -0.69
LMO4-201ENST00000370542 C11orf21Q9P2W6 132 aa10.73□□□□□ -0.69
LMO4-201ENST00000370542 AGRNO00468 2067 aa10.72□□□□□ -0.69
LMO4-201ENST00000370542 K7EQG2 157 aa10.72□□□□□ -0.69
LMO4-201ENST00000370542 RHODO00212 210 aa10.72□□□□□ -0.69
LMO4-201ENST00000370542 SNCGO76070 127 aa10.72□□□□□ -0.69
LMO4-201ENST00000370542 GIG44P09565 113 aaPredicted RBP10.72□□□□□ -0.69
LMO4-201ENST00000370542 DEFB131AP59861 70 aa10.72□□□□□ -0.69
LMO4-201ENST00000370542 VCYO14598 125 aa10.71□□□□□ -0.69
LMO4-201ENST00000370542 NXPH4O95158 308 aa10.71□□□□□ -0.69
LMO4-201ENST00000370542 TCL1BO95988 128 aa10.71□□□□□ -0.69
LMO4-201ENST00000370542 IGHV3-30P01768 117 aa10.71□□□□□ -0.69
LMO4-201ENST00000370542 IGHV3-30-5P0DP03 117 aa10.71□□□□□ -0.69
LMO4-201ENST00000370542 S100A4P26447 101 aaKnown RBP10.71□□□□□ -0.69
LMO4-201ENST00000370542 GAGE2BQ13066 116 aa10.71□□□□□ -0.69
LMO4-201ENST00000370542 GAGE2EQ4V326 116 aa10.71□□□□□ -0.69
LMO4-201ENST00000370542 DCANP1Q8TF63 244 aa10.71□□□□□ -0.69
LMO4-201ENST00000370542 GAGE2DQ9UEU5 116 aa10.71□□□□□ -0.69
LMO4-201ENST00000370542 PHLDA3Q9Y5J5 127 aa10.71□□□□□ -0.69
LMO4-201ENST00000370542 TRAV8-2A0A0B4J237 113 aa10.7□□□□□ -0.7
LMO4-201ENST00000370542 IGHV3-66A0A0C4DH42 116 aa10.7□□□□□ -0.7
LMO4-201ENST00000370542 A0A0J9YX75 114 aa10.7□□□□□ -0.7
LMO4-201ENST00000370542 H3BVH4 76 aa10.7□□□□□ -0.7
LMO4-201ENST00000370542 SLC25A20O43772 301 aa10.7□□□□□ -0.7
LMO4-201ENST00000370542 RPL13AP40429 203 aaKnown RBP10.7□□□□□ -0.7
LMO4-201ENST00000370542 ATXN8Q156A1 80 aa10.7□□□□□ -0.7
LMO4-201ENST00000370542 TRPT1Q86TN4 253 aaKnown RBP10.7□□□□□ -0.7
LMO4-201ENST00000370542 OR10J6PQ8NGY7 276 aa10.7□□□□□ -0.7
LMO4-201ENST00000370542 TRAV26-2A0A0B4J265 109 aa10.69□□□□□ -0.7
LMO4-201ENST00000370542 LGALS3P17931 250 aaKnown RBP10.69□□□□□ -0.7
LMO4-201ENST00000370542 ANKRD29Q8N6D5 301 aa10.69□□□□□ -0.7
LMO4-201ENST00000370542 Q8NAQ8 132 aa10.69□□□□□ -0.7
LMO4-201ENST00000370542 C11orf45Q8TAV5 145 aa10.69□□□□□ -0.7
LMO4-201ENST00000370542 PLEKHB2Q96CS7 222 aa10.69□□□□□ -0.7
LMO4-201ENST00000370542 KIR2DL4Q99706 377 aa10.69□□□□□ -0.7
LMO4-201ENST00000370542 LEPROTO15243 131 aa10.68□□□□□ -0.7
LMO4-201ENST00000370542 CFC1BP0CG36 223 aa10.68□□□□□ -0.7
LMO4-201ENST00000370542 CFC1P0CG37 223 aa10.68□□□□□ -0.7
LMO4-201ENST00000370542 NANOS2P60321 138 aaKnown RBP10.68□□□□□ -0.7
LMO4-201ENST00000370542 TTC32Q5I0X7 151 aa10.68□□□□□ -0.7
LMO4-201ENST00000370542 IGFL4Q6B9Z1 124 aa10.68□□□□□ -0.7
LMO4-201ENST00000370542 ZFP2Q6ZN57 461 aa10.68□□□□□ -0.7
LMO4-201ENST00000370542 C16orf92Q96LL3 132 aa10.68□□□□□ -0.7
LMO4-201ENST00000370542 DNAH2Q9P225 4427 aa10.68□□□□□ -0.7
LMO4-201ENST00000370542 TRBV6-5A0A0K0K1A5 114 aa10.67□□□□□ -0.7
LMO4-201ENST00000370542 GAGE12JA6NER3 117 aa10.67□□□□□ -0.7
LMO4-201ENST00000370542 SDHAF1A6NFY7 115 aa10.67□□□□□ -0.7
LMO4-201ENST00000370542 GAGE7O76087 117 aa10.67□□□□□ -0.7
LMO4-201ENST00000370542 GAGE12FP0CL80 117 aa10.67□□□□□ -0.7
LMO4-201ENST00000370542 GAGE12GP0CL81 117 aa10.67□□□□□ -0.7
LMO4-201ENST00000370542 GAGE12IP0CL82 117 aa10.67□□□□□ -0.7
LMO4-201ENST00000370542 RPL11P62913 178 aaKnown RBP10.67□□□□□ -0.7
LMO4-201ENST00000370542 GAGE4Q13068 117 aa10.67□□□□□ -0.7
LMO4-201ENST00000370542 RHOHQ15669 191 aa10.67□□□□□ -0.7
LMO4-201ENST00000370542 STHQ8IWL8 128 aa10.67□□□□□ -0.7
LMO4-201ENST00000370542 RNF182Q8N6D2 247 aa10.67□□□□□ -0.7
LMO4-201ENST00000370542 CSNK1G2-AS1Q8NCQ2 148 aa10.67□□□□□ -0.7
LMO4-201ENST00000370542 IGLV4-69A0A075B6H9 119 aa10.66□□□□□ -0.7
LMO4-201ENST00000370542 IGIPA6NJ69 53 aa10.66□□□□□ -0.7
LMO4-201ENST00000370542 J3QQQ9 107 aa10.66□□□□□ -0.7
LMO4-201ENST00000370542 IFITM1P13164 125 aa10.66□□□□□ -0.7
LMO4-201ENST00000370542 KRTAP4-5Q9BYR2 181 aa10.66□□□□□ -0.7
LMO4-201ENST00000370542 DNAH17Q9UFH2 4485 aa10.66□□□□□ -0.7
LMO4-201ENST00000370542 FAT2Q9NYQ8 4349 aa10.66□□□□□ -0.7
LMO4-201ENST00000370542 IGHV3-33P01772 117 aa10.65□□□□□ -0.7
LMO4-201ENST00000370542 CRYGDP07320 174 aa10.65□□□□□ -0.7
LMO4-201ENST00000370542 MGPP08493 103 aa10.65□□□□□ -0.7
LMO4-201ENST00000370542 RBMY1A1P0DJD3 496 aaKnown RBP10.65□□□□□ -0.7
LMO4-201ENST00000370542 RBMY1CP0DJD4 496 aa10.65□□□□□ -0.7
LMO4-201ENST00000370542 MIFP14174 115 aa10.65□□□□□ -0.7
LMO4-201ENST00000370542 RBMY1FQ15415 496 aaKnown RBP10.65□□□□□ -0.7
LMO4-201ENST00000370542 ZNF876PQ49A33 203 aa10.65□□□□□ -0.7
LMO4-201ENST00000370542 X6R8D5 127 aa10.65□□□□□ -0.7
LMO4-201ENST00000370542 TRAV8-4A0A0B4J246 113 aa10.64□□□□□ -0.71
LMO4-201ENST00000370542 TRBV30A0A0K0K1B3 111 aa10.64□□□□□ -0.71
LMO4-201ENST00000370542 TRBV10-2A0A0K0K1G8 114 aa10.64□□□□□ -0.71
LMO4-201ENST00000370542 FAM240AA0A1B0GVK7 77 aa10.64□□□□□ -0.71
LMO4-201ENST00000370542 H3BT86 120 aa10.64□□□□□ -0.71
LMO4-201ENST00000370542 POLR2KP53803 58 aaKnown RBP10.64□□□□□ -0.71
LMO4-201ENST00000370542 NDUFV3P56181 108 aaKnown RBP10.64□□□□□ -0.71
LMO4-201ENST00000370542 KNCNA6PVL3 124 aa10.63□□□□□ -0.71
LMO4-201ENST00000370542 C9JAW5 83 aa10.63□□□□□ -0.71
LMO4-201ENST00000370542 M0R2P5 195 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms