RNA–Protein interactions for RNA: ENST00000370536.4

SOX3-201, Transcript of SRY-box 3, humanhuman

APPRIS P1 BASIC

Gene SOX3, Length 2,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3-201ENST00000370536 OTOGQ6ZRI0 2925 aa15.03■□□□□ -0
SOX3-201ENST00000370536 CARD19Q96LW7 228 aa15.03■□□□□ -0
SOX3-201ENST00000370536 PRO1854Q9UHT4 67 aa15.03■□□□□ -0
SOX3-201ENST00000370536 PYGO1Q9Y3Y4 419 aa15.03■□□□□ -0
SOX3-201ENST00000370536 INAFM1C9JVW0 142 aa15.02■□□□□ -0
SOX3-201ENST00000370536 SPINK8P0C7L1 97 aa15.02■□□□□ -0
SOX3-201ENST00000370536 FAM110AQ9BQ89 295 aa15.02■□□□□ -0
SOX3-201ENST00000370536 J3QQQ9 107 aa15.02□□□□□ -0.01
SOX3-201ENST00000370536 TMEM263Q8WUH6 116 aaKnown RBP15.02□□□□□ -0.01
SOX3-201ENST00000370536 AMELXQ99217 191 aa15.02□□□□□ -0.01
SOX3-201ENST00000370536 IGHV3-38A0A0C4DH36 116 aa15.01□□□□□ -0.01
SOX3-201ENST00000370536 LGALS3P17931 250 aaKnown RBP15.01□□□□□ -0.01
SOX3-201ENST00000370536 Q6ZTI0 123 aa15.01□□□□□ -0.01
SOX3-201ENST00000370536 DNAJC30Q96LL9 226 aa15.01□□□□□ -0.01
SOX3-201ENST00000370536 PF4P02776 101 aa15□□□□□ -0.01
SOX3-201ENST00000370536 SCGB1C2P0DMR2 95 aa15□□□□□ -0.01
SOX3-201ENST00000370536 CEMP1Q6PRD7 247 aaPredicted RBP15□□□□□ -0.01
SOX3-201ENST00000370536 Q6ZUT4 128 aa15□□□□□ -0.01
SOX3-201ENST00000370536 FAM104AQ969W3 186 aa15□□□□□ -0.01
SOX3-201ENST00000370536 CHCHD7Q9BUK0 85 aa15□□□□□ -0.01
SOX3-201ENST00000370536 TMEM223A0PJW6 202 aa14.99□□□□□ -0.01
SOX3-201ENST00000370536 LEPROTO15243 131 aa14.99□□□□□ -0.01
SOX3-201ENST00000370536 GEMIN7Q9H840 131 aaKnown RBP14.98□□□□□ -0.01
SOX3-201ENST00000370536 NOP10Q9NPE3 64 aaKnown RBP14.98□□□□□ -0.01
SOX3-201ENST00000370536 MT-ATP8P03928 68 aa14.98□□□□□ -0.01
SOX3-201ENST00000370536 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.97□□□□□ -0.01
SOX3-201ENST00000370536 A0A0J9YXV3 536 aa14.97□□□□□ -0.01
SOX3-201ENST00000370536 IGKV2-29A2NJV5 120 aaPredicted RBP14.97□□□□□ -0.01
SOX3-201ENST00000370536 XGP55808 180 aa14.97□□□□□ -0.01
SOX3-201ENST00000370536 LINC00482Q8N8I6 264 aa14.97□□□□□ -0.01
SOX3-201ENST00000370536 NOTCH3Q9UM47 2321 aa14.97□□□□□ -0.01
SOX3-201ENST00000370536 M0QXV9 152 aa14.96□□□□□ -0.01
SOX3-201ENST00000370536 ZNF22P17026 224 aaPredicted RBP14.96□□□□□ -0.01
SOX3-201ENST00000370536 RNASE13Q5GAN3 156 aaKnown RBP14.96□□□□□ -0.01
SOX3-201ENST00000370536 TMEM262E9PQX1 116 aa14.95□□□□□ -0.02
SOX3-201ENST00000370536 CSNK1G2-AS1Q8NCQ2 148 aa14.95□□□□□ -0.02
SOX3-201ENST00000370536 SPANXA1Q9NS26 97 aa14.95□□□□□ -0.02
SOX3-201ENST00000370536 PLAC8L1A1L4L8 177 aa14.95□□□□□ -0.02
SOX3-201ENST00000370536 A4D1N5 150 aa14.95□□□□□ -0.02
SOX3-201ENST00000370536 ANKRD29Q8N6D5 301 aa14.95□□□□□ -0.02
SOX3-201ENST00000370536 UBE2D4Q9Y2X8 147 aa14.95□□□□□ -0.02
SOX3-201ENST00000370536 TRAV4A0A0B4J268 109 aa14.94□□□□□ -0.02
SOX3-201ENST00000370536 C16orf74Q96GX8 76 aa14.94□□□□□ -0.02
SOX3-201ENST00000370536 A0A0B4J2C4 111 aa14.93□□□□□ -0.02
SOX3-201ENST00000370536 DAZ2Q13117 558 aaKnown RBP14.93□□□□□ -0.02
SOX3-201ENST00000370536 IGHV3-33P01772 117 aa14.93□□□□□ -0.02
SOX3-201ENST00000370536 K7EQD1 137 aa14.92□□□□□ -0.02
SOX3-201ENST00000370536 MRPS36P82909 103 aaKnown RBP14.92□□□□□ -0.02
SOX3-201ENST00000370536 ERG28Q9UKR5 140 aa14.92□□□□□ -0.02
SOX3-201ENST00000370536 SLC25A20O43772 301 aa14.92□□□□□ -0.02
SOX3-201ENST00000370536 IGHV3-64A0A075B6Q5 118 aa14.91□□□□□ -0.02
SOX3-201ENST00000370536 C2CD3Q4AC94 2353 aa14.91□□□□□ -0.02
SOX3-201ENST00000370536 TRAV26-1A0A087WT03 109 aa14.9□□□□□ -0.02
SOX3-201ENST00000370536 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.9□□□□□ -0.02
SOX3-201ENST00000370536 GAGE7O76087 117 aa14.9□□□□□ -0.02
SOX3-201ENST00000370536 GAGE12FP0CL80 117 aa14.9□□□□□ -0.02
SOX3-201ENST00000370536 GAGE12GP0CL81 117 aa14.9□□□□□ -0.02
SOX3-201ENST00000370536 GAGE12IP0CL82 117 aa14.9□□□□□ -0.02
SOX3-201ENST00000370536 SPATA3Q8NHX4 192 aa14.9□□□□□ -0.02
SOX3-201ENST00000370536 RPL36AP83881 106 aaKnown RBP14.89□□□□□ -0.03
SOX3-201ENST00000370536 MUSTN1Q8IVN3 82 aa14.89□□□□□ -0.03
SOX3-201ENST00000370536 RPL36ALQ969Q0 106 aaKnown RBP14.89□□□□□ -0.03
SOX3-201ENST00000370536 FN1P02751 2386 aaKnown RBP14.89□□□□□ -0.03
SOX3-201ENST00000370536 TRBV10-1A0A0K0K1A3 114 aa14.89□□□□□ -0.03
SOX3-201ENST00000370536 C9JAW5 83 aa14.89□□□□□ -0.03
SOX3-201ENST00000370536 EIF4EBP3O60516 100 aaPredicted RBP14.89□□□□□ -0.03
SOX3-201ENST00000370536 NSD1Q96L73 2696 aaPredicted RBP14.88□□□□□ -0.03
SOX3-201ENST00000370536 TRGV2A0A075B6R0 118 aa14.88□□□□□ -0.03
SOX3-201ENST00000370536 TIMM21Q9BVV7 248 aa14.87□□□□□ -0.03
SOX3-201ENST00000370536 TINCRA0A1B0GVN0 87 aa14.87□□□□□ -0.03
SOX3-201ENST00000370536 GAGE12JA6NER3 117 aa14.87□□□□□ -0.03
SOX3-201ENST00000370536 GAGE4Q13068 117 aa14.87□□□□□ -0.03
SOX3-201ENST00000370536 GAGE5Q13069 117 aa14.87□□□□□ -0.03
SOX3-201ENST00000370536 OVOL2Q9BRP0 275 aa14.86□□□□□ -0.03
SOX3-201ENST00000370536 ATXN8Q156A1 80 aa14.85□□□□□ -0.03
SOX3-201ENST00000370536 LINC01600Q96MT4 127 aa14.85□□□□□ -0.03
SOX3-201ENST00000370536 IGHV3-30-3P0DP02 117 aa14.84□□□□□ -0.03
SOX3-201ENST00000370536 NTM-AS1Q6ZSK4 140 aa14.84□□□□□ -0.03
SOX3-201ENST00000370536 A0A0J9YXY3 114 aa14.84□□□□□ -0.03
SOX3-201ENST00000370536 H7C2G1 150 aa14.84□□□□□ -0.03
SOX3-201ENST00000370536 ZFAND6Q6FIF0 208 aa14.84□□□□□ -0.03
SOX3-201ENST00000370536 HIVEP1P15822 2718 aa14.83□□□□□ -0.03
SOX3-201ENST00000370536 IGHV1-58A0A0C4DH39 117 aa14.83□□□□□ -0.04
SOX3-201ENST00000370536 DAZ4Q86SG3 579 aaKnown RBP14.83□□□□□ -0.04
SOX3-201ENST00000370536 DAZ3Q9NR90 486 aaKnown RBP14.83□□□□□ -0.04
SOX3-201ENST00000370536 LINC00694P0DN24 101 aa14.83□□□□□ -0.04
SOX3-201ENST00000370536 Q1RN00 199 aa14.83□□□□□ -0.04
SOX3-201ENST00000370536 DGAT2L7PQ6IED9 249 aa14.83□□□□□ -0.04
SOX3-201ENST00000370536 TRAV8-3A0A0A6YYJ7 113 aa14.82□□□□□ -0.04
SOX3-201ENST00000370536 TRBV30A0A0K0K1B3 111 aa14.82□□□□□ -0.04
SOX3-201ENST00000370536 LINC01620Q4KN68 170 aa14.82□□□□□ -0.04
SOX3-201ENST00000370536 LOC100131303A0A0U1RQF7 123 aa14.81□□□□□ -0.04
SOX3-201ENST00000370536 C9orf66Q5T8R8 295 aa14.81□□□□□ -0.04
SOX3-201ENST00000370536 CRLF1O75462 422 aa14.81□□□□□ -0.04
SOX3-201ENST00000370536 CITED1Q99966 193 aa14.81□□□□□ -0.04
SOX3-201ENST00000370536 VWFP04275 2813 aa14.8□□□□□ -0.04
SOX3-201ENST00000370536 TRGV4A0A0C4DH28 118 aa14.8□□□□□ -0.04
SOX3-201ENST00000370536 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.8□□□□□ -0.04
SOX3-201ENST00000370536 RNF183Q96D59 192 aa14.8□□□□□ -0.04
SOX3-201ENST00000370536 VSIG2Q96IQ7 327 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms