RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 IGKV3OR2-268A0A0C4DH90 116 aa9.17□□□□□ -0.94
SSR4-202ENST00000370085 IFI27P40305 119 aaPredicted RBP9.17□□□□□ -0.94
SSR4-202ENST00000370085 C14orf177Q52M58 125 aa9.17□□□□□ -0.94
SSR4-202ENST00000370085 CDC42SE2Q9NRR3 84 aa9.17□□□□□ -0.94
SSR4-202ENST00000370085 CYSLTR1Q9Y271 337 aa9.17□□□□□ -0.94
SSR4-202ENST00000370085 A0A1B0GVY2 172 aa9.16□□□□□ -0.94
SSR4-202ENST00000370085 LINC01549A6NIU2 74 aa9.16□□□□□ -0.94
SSR4-202ENST00000370085 CCL25O15444 150 aa9.16□□□□□ -0.94
SSR4-202ENST00000370085 SS18Q15532 418 aa9.16□□□□□ -0.94
SSR4-202ENST00000370085 FA2HQ7L5A8 372 aa9.16□□□□□ -0.94
SSR4-202ENST00000370085 YPEL4Q96NS1 127 aa9.16□□□□□ -0.94
SSR4-202ENST00000370085 PGPEP1Q9NXJ5 209 aa9.16□□□□□ -0.94
SSR4-202ENST00000370085 DNAH17Q9UFH2 4485 aa9.16□□□□□ -0.94
SSR4-202ENST00000370085 IGLV10-54A0A075B6I4 117 aa9.15□□□□□ -0.94
SSR4-202ENST00000370085 RAB5BP61020 215 aa9.15□□□□□ -0.94
SSR4-202ENST00000370085 RPL39P62891 51 aaKnown RBP9.15□□□□□ -0.94
SSR4-202ENST00000370085 CDPF1Q6NVV7 123 aa9.15□□□□□ -0.94
SSR4-202ENST00000370085 SPATA12Q7Z6I5 190 aa9.15□□□□□ -0.94
SSR4-202ENST00000370085 MRPS36P82909 103 aaKnown RBP9.14□□□□□ -0.95
SSR4-202ENST00000370085 PAPPA-AS1Q5QFB9 102 aa9.14□□□□□ -0.95
SSR4-202ENST00000370085 C2orf66Q6UXQ4 117 aa9.14□□□□□ -0.95
SSR4-202ENST00000370085 Q6ZN92 141 aa9.14□□□□□ -0.95
SSR4-202ENST00000370085 NTN5Q8WTR8 489 aaPredicted RBP9.14□□□□□ -0.95
SSR4-202ENST00000370085 BAALCQ8WXS3 180 aa9.14□□□□□ -0.95
SSR4-202ENST00000370085 PYGO1Q9Y3Y4 419 aa9.14□□□□□ -0.95
SSR4-202ENST00000370085 LRCOL1A6NCL2 159 aa9.13□□□□□ -0.95
SSR4-202ENST00000370085 C1orf196B1AJZ1 125 aa9.13□□□□□ -0.95
SSR4-202ENST00000370085 NPSP0C0P6 89 aa9.13□□□□□ -0.95
SSR4-202ENST00000370085 Q8N814 137 aa9.13□□□□□ -0.95
SSR4-202ENST00000370085 FAT2Q9NYQ8 4349 aa9.12□□□□□ -0.95
SSR4-202ENST00000370085 LINC00959A0A1B0GUT2 108 aa9.12□□□□□ -0.95
SSR4-202ENST00000370085 C16orf90A8MZG2 172 aa9.12□□□□□ -0.95
SSR4-202ENST00000370085 CFAP161Q6P656 301 aa9.12□□□□□ -0.95
SSR4-202ENST00000370085 Q6ZUT4 128 aa9.12□□□□□ -0.95
SSR4-202ENST00000370085 CHCHD10Q8WYQ3 142 aaPredicted RBP9.12□□□□□ -0.95
SSR4-202ENST00000370085 AP5S1Q9NUS5 200 aa9.12□□□□□ -0.95
SSR4-202ENST00000370085 GAGE12HA6NDE8 117 aa9.11□□□□□ -0.95
SSR4-202ENST00000370085 LINC01546A6NGU7 62 aa9.11□□□□□ -0.95
SSR4-202ENST00000370085 LECT2O14960 151 aa9.11□□□□□ -0.95
SSR4-202ENST00000370085 S100A1P23297 94 aa9.11□□□□□ -0.95
SSR4-202ENST00000370085 C18orf32Q8TCD1 76 aa9.11□□□□□ -0.95
SSR4-202ENST00000370085 TMEM141Q96I45 108 aa9.11□□□□□ -0.95
SSR4-202ENST00000370085 C2orf88Q9BSF0 95 aa9.11□□□□□ -0.95
SSR4-202ENST00000370085 HECTD4Q9Y4D8 3996 aa9.11□□□□□ -0.95
SSR4-202ENST00000370085 TRAV13-1A0A0B4J241 112 aa9.1□□□□□ -0.95
SSR4-202ENST00000370085 IFITM10A6NMD0 228 aa9.1□□□□□ -0.95
SSR4-202ENST00000370085 LINC00614P0C842 121 aa9.1□□□□□ -0.95
SSR4-202ENST00000370085 XCL1P47992 114 aa9.1□□□□□ -0.95
SSR4-202ENST00000370085 TEX43Q6ZNM6 134 aa9.1□□□□□ -0.95
SSR4-202ENST00000370085 MAPKAPK5-AS1Q8N8E1 139 aa9.1□□□□□ -0.95
SSR4-202ENST00000370085 TOMM6Q96B49 74 aa9.1□□□□□ -0.95
SSR4-202ENST00000370085 IGLV5-52A0A0A0MRZ9 124 aa9.09□□□□□ -0.95
SSR4-202ENST00000370085 USP17L23D6RBM5 183 aa9.09□□□□□ -0.95
SSR4-202ENST00000370085 RNASE13Q5GAN3 156 aaKnown RBP9.09□□□□□ -0.95
SSR4-202ENST00000370085 CD164L2Q6UWJ8 174 aa9.09□□□□□ -0.95
SSR4-202ENST00000370085 SCGB3A1Q96QR1 104 aa9.09□□□□□ -0.95
SSR4-202ENST00000370085 TIMM17AQ99595 171 aa9.09□□□□□ -0.95
SSR4-202ENST00000370085 VCX2Q9H322 139 aa9.09□□□□□ -0.95
SSR4-202ENST00000370085 IGLV4-3A0A075B6K6 122 aa9.08□□□□□ -0.96
SSR4-202ENST00000370085 COLCA2A8K830 154 aa9.08□□□□□ -0.96
SSR4-202ENST00000370085 TRGC2P03986 189 aa9.08□□□□□ -0.96
SSR4-202ENST00000370085 KRTAP10-2P60368 255 aa9.08□□□□□ -0.96
SSR4-202ENST00000370085 KRTAP26-1Q6PEX3 210 aa9.08□□□□□ -0.96
SSR4-202ENST00000370085 ERASQ7Z444 233 aa9.08□□□□□ -0.96
SSR4-202ENST00000370085 PKD1P98161 4303 aa9.08□□□□□ -0.96
SSR4-202ENST00000370085 MALP21145 153 aa9.07□□□□□ -0.96
SSR4-202ENST00000370085 OPRPNQ99935 248 aaPredicted RBP9.07□□□□□ -0.96
SSR4-202ENST00000370085 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.06□□□□□ -0.96
SSR4-202ENST00000370085 hDV102S1A0JD36 115 aa9.06□□□□□ -0.96
SSR4-202ENST00000370085 IGIPA6NJ69 53 aa9.06□□□□□ -0.96
SSR4-202ENST00000370085 COX7A2LO14548 114 aa9.06□□□□□ -0.96
SSR4-202ENST00000370085 FOXI1Q12951 378 aa9.06□□□□□ -0.96
SSR4-202ENST00000370085 WFDC2Q14508 124 aa9.06□□□□□ -0.96
SSR4-202ENST00000370085 BAGE3Q86Y29 109 aa9.06□□□□□ -0.96
SSR4-202ENST00000370085 CHCHD1Q96BP2 118 aaKnown RBP9.06□□□□□ -0.96
SSR4-202ENST00000370085 SCO1O75880 301 aa9.05□□□□□ -0.96
SSR4-202ENST00000370085 APOMO95445 188 aa9.05□□□□□ -0.96
SSR4-202ENST00000370085 HBDP02042 147 aa9.05□□□□□ -0.96
SSR4-202ENST00000370085 GCSHP23434 173 aa9.05□□□□□ -0.96
SSR4-202ENST00000370085 SEC11AP67812 179 aa9.05□□□□□ -0.96
SSR4-202ENST00000370085 EPPK1P58107 5090 aaKnown RBP9.05□□□□□ -0.96
SSR4-202ENST00000370085 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.04□□□□□ -0.96
SSR4-202ENST00000370085 IGHV1-58A0A0C4DH39 117 aa9.04□□□□□ -0.96
SSR4-202ENST00000370085 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.04□□□□□ -0.96
SSR4-202ENST00000370085 ATP6V1G1O75348 118 aa9.04□□□□□ -0.96
SSR4-202ENST00000370085 AMELXQ99217 191 aa9.03□□□□□ -0.96
SSR4-202ENST00000370085 PKHD1P08F94 4074 aa9.03□□□□□ -0.96
SSR4-202ENST00000370085 HSBP1O75506 76 aa9.02□□□□□ -0.97
SSR4-202ENST00000370085 ATP5LO75964 103 aa9.02□□□□□ -0.97
SSR4-202ENST00000370085 PRSS1P07477 247 aa9.02□□□□□ -0.97
SSR4-202ENST00000370085 FAM104AQ969W3 186 aa9.02□□□□□ -0.97
SSR4-202ENST00000370085 ZNF561-AS1K7EIQ3 104 aa9.01□□□□□ -0.97
SSR4-202ENST00000370085 UBE2D1P51668 147 aa9.01□□□□□ -0.97
SSR4-202ENST00000370085 URB1-AS1Q96HZ7 61 aa9.01□□□□□ -0.97
SSR4-202ENST00000370085 GVQW2A0A096LPI5 108 aaPredicted RBP9□□□□□ -0.97
SSR4-202ENST00000370085 HERVK_113P63121 156 aa9□□□□□ -0.97
SSR4-202ENST00000370085 PMVKQ15126 192 aa9□□□□□ -0.97
SSR4-202ENST00000370085 C5orf38Q86SI9 138 aa9□□□□□ -0.97
SSR4-202ENST00000370085 C15orf56Q8N910 161 aa9□□□□□ -0.97
SSR4-202ENST00000370085 GEMIN7Q9H840 131 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms