RNA–Protein interactions for RNA: ENST00000369660.8

UBL4A-202, Transcript of ubiquitin like 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL4A, Length 2,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4A-202ENST00000369660 UBE2L6O14933 153 aa13.35□□□□□ -0.27
UBL4A-202ENST00000369660 TMEM170BQ5T4T1 132 aa13.35□□□□□ -0.27
UBL4A-202ENST00000369660 PYGO1Q9Y3Y4 419 aa13.35□□□□□ -0.27
UBL4A-202ENST00000369660 HUWE1Q7Z6Z7 4374 aaKnown RBP13.35□□□□□ -0.27
UBL4A-202ENST00000369660 TRBV25-1A0A075B6N4 114 aa13.35□□□□□ -0.27
UBL4A-202ENST00000369660 HNRNPA3P51991 378 aaKnown RBP13.35□□□□□ -0.27
UBL4A-202ENST00000369660 NANOS2P60321 138 aaKnown RBP13.35□□□□□ -0.27
UBL4A-202ENST00000369660 CHCHD5Q9BSY4 110 aa13.35□□□□□ -0.27
UBL4A-202ENST00000369660 TMEM243Q9BU79 118 aa13.35□□□□□ -0.27
UBL4A-202ENST00000369660 TRBV6-8A0A0A6YYG3 113 aa13.34□□□□□ -0.27
UBL4A-202ENST00000369660 TRAV8-6A0A0B4J262 113 aa13.34□□□□□ -0.27
UBL4A-202ENST00000369660 SLC25A34Q6PIV7 304 aa13.34□□□□□ -0.27
UBL4A-202ENST00000369660 IGHV3-64A0A075B6Q5 118 aa13.33□□□□□ -0.28
UBL4A-202ENST00000369660 AMMECR1LQ6DCA0 310 aa13.33□□□□□ -0.28
UBL4A-202ENST00000369660 CHAC1Q9BUX1 264 aa13.33□□□□□ -0.28
UBL4A-202ENST00000369660 SPANXA1Q9NS26 97 aa13.33□□□□□ -0.28
UBL4A-202ENST00000369660 IGKV3OR2-268A0A0C4DH90 116 aa13.32□□□□□ -0.28
UBL4A-202ENST00000369660 COX8AP10176 69 aa13.32□□□□□ -0.28
UBL4A-202ENST00000369660 BATFQ16520 125 aa13.32□□□□□ -0.28
UBL4A-202ENST00000369660 GTSF1LQ9H1H1 148 aa13.32□□□□□ -0.28
UBL4A-202ENST00000369660 AMELXQ99217 191 aa13.32□□□□□ -0.28
UBL4A-202ENST00000369660 STAB2Q8WWQ8 2551 aa13.31□□□□□ -0.28
UBL4A-202ENST00000369660 KPRPQ5T749 579 aaPredicted RBP13.31□□□□□ -0.28
UBL4A-202ENST00000369660 TRAV13-1A0A0B4J241 112 aa13.3□□□□□ -0.28
UBL4A-202ENST00000369660 IGLV4-60A0A075B6I1 120 aa13.3□□□□□ -0.28
UBL4A-202ENST00000369660 EREGO14944 169 aa13.3□□□□□ -0.28
UBL4A-202ENST00000369660 TMEM262E9PQX1 116 aa13.29□□□□□ -0.28
UBL4A-202ENST00000369660 PAPPA-AS1Q5QFB9 102 aa13.29□□□□□ -0.28
UBL4A-202ENST00000369660 Q8N3U1 123 aa13.29□□□□□ -0.28
UBL4A-202ENST00000369660 MAPKAPK5-AS1Q8N8E1 139 aa13.29□□□□□ -0.28
UBL4A-202ENST00000369660 OR5A1Q8NGJ0 315 aa13.29□□□□□ -0.28
UBL4A-202ENST00000369660 C11orf45Q8TAV5 145 aa13.29□□□□□ -0.28
UBL4A-202ENST00000369660 SPATA25Q9BR10 227 aa13.29□□□□□ -0.28
UBL4A-202ENST00000369660 TM2D3Q9BRN9 247 aa13.28□□□□□ -0.28
UBL4A-202ENST00000369660 SNHG12Q9BXW3 62 aa13.28□□□□□ -0.28
UBL4A-202ENST00000369660 C11orf68Q9H3H3 251 aaKnown RBP13.28□□□□□ -0.28
UBL4A-202ENST00000369660 CDC42SE2Q9NRR3 84 aa13.27□□□□□ -0.29
UBL4A-202ENST00000369660 C2orf88Q9BSF0 95 aa13.27□□□□□ -0.29
UBL4A-202ENST00000369660 ZNF22P17026 224 aaPredicted RBP13.26□□□□□ -0.29
UBL4A-202ENST00000369660 HINT1P49773 126 aaPredicted RBP13.26□□□□□ -0.29
UBL4A-202ENST00000369660 BOD1L2Q8IYS8 172 aa13.26□□□□□ -0.29
UBL4A-202ENST00000369660 CLPSL2Q6UWE3 100 aa13.25□□□□□ -0.29
UBL4A-202ENST00000369660 C2orf91Q6ZV80 131 aa13.25□□□□□ -0.29
UBL4A-202ENST00000369660 TMEM101Q96IK0 257 aa13.25□□□□□ -0.29
UBL4A-202ENST00000369660 MEGF8Q7Z7M0 2845 aa13.25□□□□□ -0.29
UBL4A-202ENST00000369660 TEX48A0A1B0GUV7 120 aa13.25□□□□□ -0.29
UBL4A-202ENST00000369660 COX6A2Q02221 97 aa13.25□□□□□ -0.29
UBL4A-202ENST00000369660 MPV17L2Q567V2 206 aa13.25□□□□□ -0.29
UBL4A-202ENST00000369660 MRPL52Q86TS9 123 aaKnown RBP13.25□□□□□ -0.29
UBL4A-202ENST00000369660 NFE4Q86UQ8 179 aa13.24□□□□□ -0.29
UBL4A-202ENST00000369660 TIMM21Q9BVV7 248 aa13.24□□□□□ -0.29
UBL4A-202ENST00000369660 UBE2D1P51668 147 aa13.24□□□□□ -0.29
UBL4A-202ENST00000369660 MRPS36P82909 103 aaKnown RBP13.24□□□□□ -0.29
UBL4A-202ENST00000369660 ICOSQ9Y6W8 199 aa13.24□□□□□ -0.29
UBL4A-202ENST00000369660 TRAV8-3A0A0A6YYJ7 113 aa13.23□□□□□ -0.29
UBL4A-202ENST00000369660 TSPEAR-AS2P59090 65 aa13.23□□□□□ -0.29
UBL4A-202ENST00000369660 MRPL23Q16540 153 aaKnown RBP13.23□□□□□ -0.29
UBL4A-202ENST00000369660 LINC00469Q8N7U9 141 aa13.23□□□□□ -0.29
UBL4A-202ENST00000369660 DEFB131BA0A096LNP1 70 aa13.22□□□□□ -0.29
UBL4A-202ENST00000369660 E9PLD3 99 aa13.22□□□□□ -0.29
UBL4A-202ENST00000369660 GEMIN7Q9H840 131 aaKnown RBP13.22□□□□□ -0.29
UBL4A-202ENST00000369660 CDKN2A-AS1Q9UH64 79 aa13.22□□□□□ -0.29
UBL4A-202ENST00000369660 CSDC2Q9Y534 153 aaKnown RBP13.22□□□□□ -0.29
UBL4A-202ENST00000369660 DNAH9Q9NYC9 4486 aa13.22□□□□□ -0.29
UBL4A-202ENST00000369660 SPINK8P0C7L1 97 aa13.21□□□□□ -0.29
UBL4A-202ENST00000369660 LYSTQ99698 3801 aa13.21□□□□□ -0.29
UBL4A-202ENST00000369660 PRKDCP78527 4128 aaKnown RBP13.21□□□□□ -0.3
UBL4A-202ENST00000369660 TMEM223A0PJW6 202 aa13.21□□□□□ -0.3
UBL4A-202ENST00000369660 M0R143 59 aa13.21□□□□□ -0.3
UBL4A-202ENST00000369660 LINC00242Q5T6M2 205 aa13.21□□□□□ -0.3
UBL4A-202ENST00000369660 TMEM97Q5BJF2 176 aa13.2□□□□□ -0.3
UBL4A-202ENST00000369660 HERVK_113P61574 105 aa13.2□□□□□ -0.3
UBL4A-202ENST00000369660 RBX1P62877 108 aa13.2□□□□□ -0.3
UBL4A-202ENST00000369660 MRPS16Q9Y3D3 137 aaKnown RBP13.2□□□□□ -0.3
UBL4A-202ENST00000369660 TINCRA0A1B0GVN0 87 aa13.19□□□□□ -0.3
UBL4A-202ENST00000369660 NPSP0C0P6 89 aa13.19□□□□□ -0.3
UBL4A-202ENST00000369660 ZNF815PA8K554 130 aa13.18□□□□□ -0.3
UBL4A-202ENST00000369660 H7C423 109 aa13.17□□□□□ -0.3
UBL4A-202ENST00000369660 PLEKHB2Q96CS7 222 aa13.17□□□□□ -0.3
UBL4A-202ENST00000369660 MYMXA0A1B0GTQ4 84 aa13.16□□□□□ -0.3
UBL4A-202ENST00000369660 ZNF25P17030 456 aaPredicted RBP13.16□□□□□ -0.3
UBL4A-202ENST00000369660 LYPD5Q6UWN5 251 aa13.16□□□□□ -0.3
UBL4A-202ENST00000369660 J3QQQ9 107 aa13.15□□□□□ -0.3
UBL4A-202ENST00000369660 SMAGPQ0VAQ4 97 aa13.15□□□□□ -0.3
UBL4A-202ENST00000369660 ANGP03950 147 aaKnown RBP13.15□□□□□ -0.3
UBL4A-202ENST00000369660 IGHV3-30-3P0DP02 117 aa13.15□□□□□ -0.3
UBL4A-202ENST00000369660 DLEU1O43261 78 aa13.14□□□□□ -0.31
UBL4A-202ENST00000369660 LINC00269Q8N2A0 174 aa13.14□□□□□ -0.31
UBL4A-202ENST00000369660 LGALS3P17931 250 aaKnown RBP13.14□□□□□ -0.31
UBL4A-202ENST00000369660 SCGB1D4Q6XE38 83 aa13.14□□□□□ -0.31
UBL4A-202ENST00000369660 TENM2Q9NT68 2774 aa13.13□□□□□ -0.31
UBL4A-202ENST00000369660 CSMD3Q7Z407 3707 aa13.13□□□□□ -0.31
UBL4A-202ENST00000369660 IGLV10-54A0A075B6I4 117 aa13.13□□□□□ -0.31
UBL4A-202ENST00000369660 K7EP13 123 aa13.12□□□□□ -0.31
UBL4A-202ENST00000369660 HERVK_113P63121 156 aa13.12□□□□□ -0.31
UBL4A-202ENST00000369660 LELP1Q5T871 98 aa13.12□□□□□ -0.31
UBL4A-202ENST00000369660 LEPROTO15243 131 aa13.12□□□□□ -0.31
UBL4A-202ENST00000369660 IGHV3-30P01768 117 aa13.12□□□□□ -0.31
UBL4A-202ENST00000369660 IGHV3-33P01772 117 aa13.12□□□□□ -0.31
UBL4A-202ENST00000369660 IGHV3-30-5P0DP03 117 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms