RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 TEX49A0A1B0GTD5 131 aa5.08□□□□□ -1.6
CSDE1-204ENST00000369530 C19orf73Q9NVV2 129 aa5.08□□□□□ -1.6
CSDE1-204ENST00000369530 LRP1BQ9NZR2 4599 aa5.08□□□□□ -1.6
CSDE1-204ENST00000369530 Q9H3A6 140 aa5.07□□□□□ -1.6
CSDE1-204ENST00000369530 LOC389332A0A1B0GUA5 103 aa5.07□□□□□ -1.6
CSDE1-204ENST00000369530 KHDC1LQ5JSQ8 128 aa5.07□□□□□ -1.6
CSDE1-204ENST00000369530 LINC00477Q96M19 166 aa5.07□□□□□ -1.6
CSDE1-204ENST00000369530 TENM3Q9P273 2699 aa5.07□□□□□ -1.6
CSDE1-204ENST00000369530 TRGV3P03979 118 aa5.07□□□□□ -1.6
CSDE1-204ENST00000369530 PRSS1P07477 247 aa5.07□□□□□ -1.6
CSDE1-204ENST00000369530 IGFL4Q6B9Z1 124 aa5.07□□□□□ -1.6
CSDE1-204ENST00000369530 C3orf56Q8N813 242 aa5.07□□□□□ -1.6
CSDE1-204ENST00000369530 PEMTQ9UBM1 199 aa5.07□□□□□ -1.6
CSDE1-204ENST00000369530 ATRQ13535 2644 aa5.06□□□□□ -1.6
CSDE1-204ENST00000369530 TMSB15BA0A087X1C1 80 aa5.06□□□□□ -1.6
CSDE1-204ENST00000369530 A0A0J9YX75 114 aa5.06□□□□□ -1.6
CSDE1-204ENST00000369530 J3QQQ9 107 aa5.06□□□□□ -1.6
CSDE1-204ENST00000369530 K7EIM0 57 aa5.06□□□□□ -1.6
CSDE1-204ENST00000369530 ZNF56Q15929 161 aa5.06□□□□□ -1.6
CSDE1-204ENST00000369530 SIGLEC15Q6ZMC9 328 aa5.06□□□□□ -1.6
CSDE1-204ENST00000369530 C17orf77Q96MU5 243 aa5.06□□□□□ -1.6
CSDE1-204ENST00000369530 C1orf43Q9BWL3 253 aa5.06□□□□□ -1.6
CSDE1-204ENST00000369530 SORL1Q92673 2214 aa5.06□□□□□ -1.6
CSDE1-204ENST00000369530 H7C423 109 aa5.06□□□□□ -1.6
CSDE1-204ENST00000369530 M0R3E3 92 aa5.06□□□□□ -1.6
CSDE1-204ENST00000369530 IGKV1-17P01599 117 aa5.06□□□□□ -1.6
CSDE1-204ENST00000369530 CKS2P33552 79 aa5.06□□□□□ -1.6
CSDE1-204ENST00000369530 LYZL1Q6UWQ5 148 aa5.06□□□□□ -1.6
CSDE1-204ENST00000369530 C18orf65Q6ZTR6 163 aa5.06□□□□□ -1.6
CSDE1-204ENST00000369530 DCANP1Q8TF63 244 aa5.06□□□□□ -1.6
CSDE1-204ENST00000369530 PRR25Q96S07 402 aa5.06□□□□□ -1.6
CSDE1-204ENST00000369530 I3L2K1 104 aa5.06□□□□□ -1.6
CSDE1-204ENST00000369530 CD28P10747 220 aa5.06□□□□□ -1.6
CSDE1-204ENST00000369530 C1orf158Q8N1D5 194 aa5.06□□□□□ -1.6
CSDE1-204ENST00000369530 CYSTM1Q9H1C7 97 aa5.06□□□□□ -1.6
CSDE1-204ENST00000369530 TP53TG1Q9Y2A0 90 aa5.06□□□□□ -1.6
CSDE1-204ENST00000369530 H3BVH4 76 aa5.05□□□□□ -1.6
CSDE1-204ENST00000369530 ZNF491Q8N8L2 437 aa5.05□□□□□ -1.6
CSDE1-204ENST00000369530 NRACQ8N912 160 aa5.05□□□□□ -1.6
CSDE1-204ENST00000369530 SMCR5Q8TEV8 140 aa5.05□□□□□ -1.6
CSDE1-204ENST00000369530 TOMM6Q96B49 74 aa5.05□□□□□ -1.6
CSDE1-204ENST00000369530 V9GYY9 64 aa5.05□□□□□ -1.6
CSDE1-204ENST00000369530 DPH3P1Q9H4G8 78 aa5.05□□□□□ -1.6
CSDE1-204ENST00000369530 MOB4Q9Y3A3 225 aa5.05□□□□□ -1.6
CSDE1-204ENST00000369530 TMEM223A0PJW6 202 aa5.05□□□□□ -1.6
CSDE1-204ENST00000369530 LAGE3Q14657 143 aa5.05□□□□□ -1.6
CSDE1-204ENST00000369530 LINC00336Q6ZUF6 198 aa5.05□□□□□ -1.6
CSDE1-204ENST00000369530 TRAV41A0A0B4J266 112 aa5.04□□□□□ -1.6
CSDE1-204ENST00000369530 C6orf226Q5I0X4 101 aa5.04□□□□□ -1.6
CSDE1-204ENST00000369530 SERP2Q8N6R1 65 aa5.04□□□□□ -1.6
CSDE1-204ENST00000369530 DAND5Q8N907 189 aa5.04□□□□□ -1.6
CSDE1-204ENST00000369530 EEF1AKMT3Q96AZ1 226 aa5.04□□□□□ -1.6
CSDE1-204ENST00000369530 FANCD2OSQ96PS1 177 aa5.04□□□□□ -1.6
CSDE1-204ENST00000369530 RYR1P21817 5038 aa5.04□□□□□ -1.6
CSDE1-204ENST00000369530 ABCA13Q86UQ4 5058 aa5.04□□□□□ -1.6
CSDE1-204ENST00000369530 IGHV4-4A0A075B6R2 117 aa5.04□□□□□ -1.6
CSDE1-204ENST00000369530 H3BUA1 57 aa5.04□□□□□ -1.6
CSDE1-204ENST00000369530 NDUFC2O95298 119 aa5.04□□□□□ -1.6
CSDE1-204ENST00000369530 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.04□□□□□ -1.6
CSDE1-204ENST00000369530 ZNF815PA8K554 130 aa5.04□□□□□ -1.6
CSDE1-204ENST00000369530 PFN2P35080 140 aa5.04□□□□□ -1.6
CSDE1-204ENST00000369530 FXYD7P58549 80 aa5.04□□□□□ -1.6
CSDE1-204ENST00000369530 RPL18AQ02543 176 aaKnown RBP5.04□□□□□ -1.6
CSDE1-204ENST00000369530 ERCC8Q13216 396 aa5.04□□□□□ -1.6
CSDE1-204ENST00000369530 PAPPA-AS1Q5QFB9 102 aa5.04□□□□□ -1.6
CSDE1-204ENST00000369530 C4orf3Q8WVX3 66 aa5.04□□□□□ -1.6
CSDE1-204ENST00000369530 TRAV13-1A0A0B4J241 112 aa5.03□□□□□ -1.6
CSDE1-204ENST00000369530 LST1O00453 97 aa5.03□□□□□ -1.6
CSDE1-204ENST00000369530 BUB3O43684 328 aa5.03□□□□□ -1.6
CSDE1-204ENST00000369530 WFDC3Q8IUB2 231 aa5.03□□□□□ -1.6
CSDE1-204ENST00000369530 IGLV11-55A0A075B6I3 123 aa5.03□□□□□ -1.6
CSDE1-204ENST00000369530 TRBV7-1A0A0A6YYK4 115 aa5.03□□□□□ -1.6
CSDE1-204ENST00000369530 A0A1W2PRX2 142 aa5.03□□□□□ -1.6
CSDE1-204ENST00000369530 APRG1Q8IVJ8 170 aa5.03□□□□□ -1.6
CSDE1-204ENST00000369530 TRAV12-2A0A075B6T6 113 aa5.02□□□□□ -1.61
CSDE1-204ENST00000369530 hADV29S1A0JD25 119 aa5.02□□□□□ -1.61
CSDE1-204ENST00000369530 FAM110DQ8TAY7 271 aaPredicted RBP5.02□□□□□ -1.61
CSDE1-204ENST00000369530 SERP1Q9Y6X1 66 aa5.02□□□□□ -1.61
CSDE1-204ENST00000369530 IGKV2-40A0A087WW87 121 aaPredicted RBP5.02□□□□□ -1.61
CSDE1-204ENST00000369530 C11orf86A6NJI1 115 aa5.02□□□□□ -1.61
CSDE1-204ENST00000369530 IGKV2D-40P01614 121 aaPredicted RBP5.02□□□□□ -1.61
CSDE1-204ENST00000369530 EDN2P20800 178 aa5.02□□□□□ -1.61
CSDE1-204ENST00000369530 C2orf82Q6UX34 121 aa5.02□□□□□ -1.61
CSDE1-204ENST00000369530 A8MTW9 85 aa5.02□□□□□ -1.61
CSDE1-204ENST00000369530 CTSGP08311 255 aa5.02□□□□□ -1.61
CSDE1-204ENST00000369530 ZNF22P17026 224 aaPredicted RBP5.02□□□□□ -1.61
CSDE1-204ENST00000369530 MRPS36P82909 103 aaKnown RBP5.02□□□□□ -1.61
CSDE1-204ENST00000369530 ZNF415Q09FC8 603 aa5.02□□□□□ -1.61
CSDE1-204ENST00000369530 Q8TAT8 98 aa5.02□□□□□ -1.61
CSDE1-204ENST00000369530 HIVEP2P31629 2446 aa5.01□□□□□ -1.61
CSDE1-204ENST00000369530 TRBV19A0A075B6N1 114 aa5.01□□□□□ -1.61
CSDE1-204ENST00000369530 SDHAF1A6NFY7 115 aa5.01□□□□□ -1.61
CSDE1-204ENST00000369530 K7EIL1 84 aa5.01□□□□□ -1.61
CSDE1-204ENST00000369530 RPL35AP18077 110 aaKnown RBP5.01□□□□□ -1.61
CSDE1-204ENST00000369530 SRSF9Q13242 221 aaKnown RBP eCLIP5.01□□□□□ -1.61
CSDE1-204ENST00000369530 C16orf92Q96LL3 132 aa5.01□□□□□ -1.61
CSDE1-204ENST00000369530 IGLV4-69A0A075B6H9 119 aa5.01□□□□□ -1.61
CSDE1-204ENST00000369530 SMKR1H3BMG3 65 aa5.01□□□□□ -1.61
CSDE1-204ENST00000369530 PDE6HQ13956 83 aa5.01□□□□□ -1.61
CSDE1-204ENST00000369530 C20orf173Q96LM9 149 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms