RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 BEAN1Q3B7T3 259 aa7.74□□□□□ -1.17
PRDM1-201ENST00000369089 ADAMTSL4-AS1Q5T5F5 129 aa7.74□□□□□ -1.17
PRDM1-201ENST00000369089 NKAPP1Q8N9T2 125 aa7.74□□□□□ -1.17
PRDM1-201ENST00000369089 BPESC1Q9GZL8 116 aa7.74□□□□□ -1.17
PRDM1-201ENST00000369089 CTSZQ9UBR2 303 aa7.74□□□□□ -1.17
PRDM1-201ENST00000369089 PTPN13Q12923 2485 aa7.73□□□□□ -1.17
PRDM1-201ENST00000369089 IGHV4OR15-8A0A075B7B6 117 aa7.73□□□□□ -1.17
PRDM1-201ENST00000369089 A0A087WW49 117 aa7.73□□□□□ -1.17
PRDM1-201ENST00000369089 TRGV4A0A0C4DH28 118 aa7.73□□□□□ -1.17
PRDM1-201ENST00000369089 IGHV3-16A0A0C4DH30 117 aa7.73□□□□□ -1.17
PRDM1-201ENST00000369089 POLR2KP53803 58 aaKnown RBP7.73□□□□□ -1.17
PRDM1-201ENST00000369089 SPINK13Q1W4C9 94 aa7.73□□□□□ -1.17
PRDM1-201ENST00000369089 SMIM11BQ8TCY0 68 aa7.73□□□□□ -1.17
PRDM1-201ENST00000369089 TMEM131Q92545 1883 aa7.73□□□□□ -1.17
PRDM1-201ENST00000369089 TRGV1A0A0A0MS02 117 aa7.73□□□□□ -1.17
PRDM1-201ENST00000369089 LINC00482Q8N8I6 264 aa7.73□□□□□ -1.17
PRDM1-201ENST00000369089 Q96MF0 132 aa7.73□□□□□ -1.17
PRDM1-201ENST00000369089 IGHV7-4-1A0A0J9YVY3 117 aa7.72□□□□□ -1.17
PRDM1-201ENST00000369089 TRBV6-5A0A0K0K1A5 114 aa7.72□□□□□ -1.17
PRDM1-201ENST00000369089 CXCL6P80162 114 aa7.72□□□□□ -1.17
PRDM1-201ENST00000369089 KTN1-AS1Q86SY8 53 aa7.72□□□□□ -1.17
PRDM1-201ENST00000369089 CTSGP08311 255 aa7.72□□□□□ -1.17
PRDM1-201ENST00000369089 C10orf142B7Z368 130 aa7.72□□□□□ -1.17
PRDM1-201ENST00000369089 BRD3OSQ6XYD6 125 aa7.72□□□□□ -1.17
PRDM1-201ENST00000369089 CEP350Q5VT06 3117 aa7.72□□□□□ -1.17
PRDM1-201ENST00000369089 IGLV11-55A0A075B6I3 123 aa7.72□□□□□ -1.17
PRDM1-201ENST00000369089 WISP2O76076 250 aa7.72□□□□□ -1.17
PRDM1-201ENST00000369089 CDSNQ15517 529 aa7.72□□□□□ -1.17
PRDM1-201ENST00000369089 PRR15Q8IV56 129 aa7.72□□□□□ -1.17
PRDM1-201ENST00000369089 ITLN2Q8WWU7 325 aaPredicted RBP7.72□□□□□ -1.17
PRDM1-201ENST00000369089 ZFAND3Q9H8U3 227 aa7.71□□□□□ -1.17
PRDM1-201ENST00000369089 B4DSR2 109 aa7.71□□□□□ -1.18
PRDM1-201ENST00000369089 LINC00269Q8N2A0 174 aa7.71□□□□□ -1.18
PRDM1-201ENST00000369089 DSCR9P59020 149 aa7.7□□□□□ -1.18
PRDM1-201ENST00000369089 CASC2Q6XLA1 102 aa7.7□□□□□ -1.18
PRDM1-201ENST00000369089 IGHV4-28A0A0C4DH34 117 aa7.7□□□□□ -1.18
PRDM1-201ENST00000369089 IGHV3-53P01767 116 aa7.7□□□□□ -1.18
PRDM1-201ENST00000369089 C1orf229Q6ZS94 237 aaPredicted RBP7.7□□□□□ -1.18
PRDM1-201ENST00000369089 MUC22E2RYF6 1773 aaPredicted RBP7.7□□□□□ -1.18
PRDM1-201ENST00000369089 H3BUX3 64 aa7.7□□□□□ -1.18
PRDM1-201ENST00000369089 DNAH12Q6ZR08 3092 aa7.7□□□□□ -1.18
PRDM1-201ENST00000369089 LIMD2Q9BT23 127 aa7.7□□□□□ -1.18
PRDM1-201ENST00000369089 EML5Q05BV3 1969 aa7.7□□□□□ -1.18
PRDM1-201ENST00000369089 PTPRSQ13332 1948 aa7.7□□□□□ -1.18
PRDM1-201ENST00000369089 COX8CQ7Z4L0 72 aa7.69□□□□□ -1.18
PRDM1-201ENST00000369089 CEP295Q9C0D2 2601 aa7.69□□□□□ -1.18
PRDM1-201ENST00000369089 H7BZZ5 65 aa7.69□□□□□ -1.18
PRDM1-201ENST00000369089 C22orf34Q6ZV56 151 aa7.69□□□□□ -1.18
PRDM1-201ENST00000369089 C11orf21Q9P2W6 132 aa7.69□□□□□ -1.18
PRDM1-201ENST00000369089 KLKP1Q107X0 134 aa7.68□□□□□ -1.18
PRDM1-201ENST00000369089 SEM1Q6ZVN7 128 aa7.68□□□□□ -1.18
PRDM1-201ENST00000369089 ATG2AQ2TAZ0 1938 aa7.68□□□□□ -1.18
PRDM1-201ENST00000369089 A0A087WYN8 130 aa7.68□□□□□ -1.18
PRDM1-201ENST00000369089 NDUFA4O00483 81 aa7.68□□□□□ -1.18
PRDM1-201ENST00000369089 CGB3P0DN86 165 aa7.68□□□□□ -1.18
PRDM1-201ENST00000369089 CGB7P0DN87 165 aa7.68□□□□□ -1.18
PRDM1-201ENST00000369089 GRNP28799 593 aaKnown RBP7.68□□□□□ -1.18
PRDM1-201ENST00000369089 USMG5Q96IX5 58 aa7.68□□□□□ -1.18
PRDM1-201ENST00000369089 KAAG1Q9UBP8 84 aa7.68□□□□□ -1.18
PRDM1-201ENST00000369089 SONP18583 2426 aaKnown RBP7.68□□□□□ -1.18
PRDM1-201ENST00000369089 NANOS2P60321 138 aaKnown RBP7.67□□□□□ -1.18
PRDM1-201ENST00000369089 CCDC168Q8NDH2 2452 aa7.67□□□□□ -1.18
PRDM1-201ENST00000369089 H3BS24 57 aa7.67□□□□□ -1.18
PRDM1-201ENST00000369089 NTM-AS1Q6ZSK4 140 aa7.67□□□□□ -1.18
PRDM1-201ENST00000369089 FSTL3O95633 263 aa7.67□□□□□ -1.18
PRDM1-201ENST00000369089 LINC01547P58512 204 aaPredicted RBP7.67□□□□□ -1.18
PRDM1-201ENST00000369089 MYO18BQ8IUG5 2567 aa7.67□□□□□ -1.18
PRDM1-201ENST00000369089 ARHGAP32A7KAX9 2087 aa7.67□□□□□ -1.18
PRDM1-201ENST00000369089 LHBP01229 141 aa7.66□□□□□ -1.18
PRDM1-201ENST00000369089 PSMG3-AS1Q96PY0 264 aa7.66□□□□□ -1.18
PRDM1-201ENST00000369089 M0QY20 66 aa7.66□□□□□ -1.18
PRDM1-201ENST00000369089 ATP6V0E1O15342 81 aa7.66□□□□□ -1.18
PRDM1-201ENST00000369089 IBA57-AS1B1ANH7 110 aa7.66□□□□□ -1.18
PRDM1-201ENST00000369089 TSHBP01222 138 aa7.66□□□□□ -1.18
PRDM1-201ENST00000369089 CLPSL1A2RUU4 121 aa7.66□□□□□ -1.18
PRDM1-201ENST00000369089 OVOL3O00110 214 aa7.66□□□□□ -1.18
PRDM1-201ENST00000369089 ESM1Q9NQ30 184 aa7.66□□□□□ -1.18
PRDM1-201ENST00000369089 ZNF73O43830 326 aaPredicted RBP7.65□□□□□ -1.18
PRDM1-201ENST00000369089 DIRC1Q969H9 104 aa7.65□□□□□ -1.18
PRDM1-201ENST00000369089 CELA1Q9UNI1 258 aa7.65□□□□□ -1.19
PRDM1-201ENST00000369089 RUSC1-AS1Q66K80 236 aa7.64□□□□□ -1.19
PRDM1-201ENST00000369089 Q6ZVQ6 151 aa7.64□□□□□ -1.19
PRDM1-201ENST00000369089 UBE2E2Q96LR5 201 aa7.64□□□□□ -1.19
PRDM1-201ENST00000369089 LINC01600Q96MT4 127 aa7.64□□□□□ -1.19
PRDM1-201ENST00000369089 FAM30AQ9NZY2 134 aa7.64□□□□□ -1.19
PRDM1-201ENST00000369089 ZNF580Q9UK33 172 aa7.64□□□□□ -1.19
PRDM1-201ENST00000369089 CEP192Q8TEP8 1941 aa7.64□□□□□ -1.19
PRDM1-201ENST00000369089 MSMBP08118 114 aa7.63□□□□□ -1.19
PRDM1-201ENST00000369089 MSMPQ1L6U9 139 aa7.63□□□□□ -1.19
PRDM1-201ENST00000369089 LINC00574Q9H8X3 128 aa7.63□□□□□ -1.19
PRDM1-201ENST00000369089 G3V318 75 aa7.63□□□□□ -1.19
PRDM1-201ENST00000369089 CD164L2Q6UWJ8 174 aa7.63□□□□□ -1.19
PRDM1-201ENST00000369089 RBM12B-AS1Q9P1G2 102 aa7.63□□□□□ -1.19
PRDM1-201ENST00000369089 NAV2Q8IVL1 2488 aa7.62□□□□□ -1.19
PRDM1-201ENST00000369089 HCG22E2RYF7 251 aa7.62□□□□□ -1.19
PRDM1-201ENST00000369089 GPHB5Q86YW7 130 aa7.62□□□□□ -1.19
PRDM1-201ENST00000369089 LCA10Q71F78 164 aa7.62□□□□□ -1.19
PRDM1-201ENST00000369089 LINC00467Q9BRT7 94 aa7.62□□□□□ -1.19
PRDM1-201ENST00000369089 WFDC10AQ9H1F0 79 aa7.62□□□□□ -1.19
PRDM1-201ENST00000369089 SMAD5-AS1Q9Y6J3 95 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms