RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 VAMP8Q9BV40 100 aa16.51■□□□□ 0.23
SNX3-203ENST00000368979 CHCHD5Q9BSY4 110 aa16.5■□□□□ 0.23
SNX3-203ENST00000368979 TRAV9-2A0A087WT02 112 aa16.5■□□□□ 0.23
SNX3-203ENST00000368979 DPM2O94777 84 aa16.5■□□□□ 0.23
SNX3-203ENST00000368979 GAGE6Q13070 117 aa16.5■□□□□ 0.23
SNX3-203ENST00000368979 MAJINQ3KP22 176 aa16.5■□□□□ 0.23
SNX3-203ENST00000368979 VCX2Q9H322 139 aa16.5■□□□□ 0.23
SNX3-203ENST00000368979 IGKCP01834 107 aa16.49■□□□□ 0.23
SNX3-203ENST00000368979 ZNF25P17030 456 aaPredicted RBP16.49■□□□□ 0.23
SNX3-203ENST00000368979 DGAT2L7PQ6IED9 249 aa16.49■□□□□ 0.23
SNX3-203ENST00000368979 TIRAPP58753 221 aa16.48■□□□□ 0.23
SNX3-203ENST00000368979 AMMECR1LQ6DCA0 310 aa16.48■□□□□ 0.23
SNX3-203ENST00000368979 ZNF664Q8N3J9 261 aa16.48■□□□□ 0.23
SNX3-203ENST00000368979 PAM16Q9Y3D7 125 aa16.48■□□□□ 0.23
SNX3-203ENST00000368979 IGLV4-69A0A075B6H9 119 aa16.47■□□□□ 0.23
SNX3-203ENST00000368979 PLNP26678 52 aa16.47■□□□□ 0.23
SNX3-203ENST00000368979 RNASE13Q5GAN3 156 aaKnown RBP16.47■□□□□ 0.23
SNX3-203ENST00000368979 hDV102S1A0JD36 115 aa16.46■□□□□ 0.23
SNX3-203ENST00000368979 LELP1Q5T871 98 aa16.46■□□□□ 0.23
SNX3-203ENST00000368979 LYPD5Q6UWN5 251 aa16.46■□□□□ 0.23
SNX3-203ENST00000368979 OR5A1Q8NGJ0 315 aa16.46■□□□□ 0.23
SNX3-203ENST00000368979 TMEM101Q96IK0 257 aa16.45■□□□□ 0.22
SNX3-203ENST00000368979 CDC42SE2Q9NRR3 84 aa16.45■□□□□ 0.22
SNX3-203ENST00000368979 SPATA45Q537H7 98 aa16.45■□□□□ 0.22
SNX3-203ENST00000368979 COL7A1Q02388 2944 aa16.43■□□□□ 0.22
SNX3-203ENST00000368979 IGLV4-60A0A075B6I1 120 aa16.42■□□□□ 0.22
SNX3-203ENST00000368979 C15orf53Q8NAA6 179 aa16.42■□□□□ 0.22
SNX3-203ENST00000368979 C2orf88Q9BSF0 95 aa16.42■□□□□ 0.22
SNX3-203ENST00000368979 A0A1B0GUV1 79 aa16.41■□□□□ 0.22
SNX3-203ENST00000368979 C11orf86A6NJI1 115 aa16.41■□□□□ 0.22
SNX3-203ENST00000368979 HSBP1L1C9JCN9 74 aa16.41■□□□□ 0.22
SNX3-203ENST00000368979 IGLC3P0DOY3 106 aa16.41■□□□□ 0.22
SNX3-203ENST00000368979 NFE4Q86UQ8 179 aa16.41■□□□□ 0.22
SNX3-203ENST00000368979 MPV17L2Q567V2 206 aa16.4■□□□□ 0.22
SNX3-203ENST00000368979 UBE2D1P51668 147 aa16.4■□□□□ 0.22
SNX3-203ENST00000368979 RBX1P62877 108 aa16.4■□□□□ 0.22
SNX3-203ENST00000368979 STPG4Q8N801 248 aa16.4■□□□□ 0.22
SNX3-203ENST00000368979 A0A0J9YXV3 536 aa16.39■□□□□ 0.21
SNX3-203ENST00000368979 TMEM262E9PQX1 116 aa16.39■□□□□ 0.21
SNX3-203ENST00000368979 PKIAP61925 76 aa16.39■□□□□ 0.21
SNX3-203ENST00000368979 PRO1933Q9H354 126 aa16.39■□□□□ 0.21
SNX3-203ENST00000368979 ESRGQ1W209 222 aa16.38■□□□□ 0.21
SNX3-203ENST00000368979 ANKRD39Q53RE8 183 aa16.38■□□□□ 0.21
SNX3-203ENST00000368979 CHAC1Q9BUX1 264 aa16.38■□□□□ 0.21
SNX3-203ENST00000368979 PRKDCP78527 4128 aaKnown RBP16.37■□□□□ 0.21
SNX3-203ENST00000368979 FAM19A3Q7Z5A8 133 aa16.36■□□□□ 0.21
SNX3-203ENST00000368979 TRAV8-6A0A0B4J262 113 aa16.35■□□□□ 0.21
SNX3-203ENST00000368979 TINCRA0A1B0GVN0 87 aa16.35■□□□□ 0.21
SNX3-203ENST00000368979 IGLL5B9A064 214 aa16.35■□□□□ 0.21
SNX3-203ENST00000368979 TSTD3H0UI37 97 aa16.35■□□□□ 0.21
SNX3-203ENST00000368979 ZNF22P17026 224 aaPredicted RBP16.34■□□□□ 0.21
SNX3-203ENST00000368979 Q8N3U1 123 aa16.33■□□□□ 0.2
SNX3-203ENST00000368979 TRAV13-1A0A0B4J241 112 aa16.32■□□□□ 0.2
SNX3-203ENST00000368979 TMEM170BQ5T4T1 132 aa16.31■□□□□ 0.2
SNX3-203ENST00000368979 LINC00242Q5T6M2 205 aa16.31■□□□□ 0.2
SNX3-203ENST00000368979 STAB2Q8WWQ8 2551 aa16.31■□□□□ 0.2
SNX3-203ENST00000368979 TCTAP57738 103 aa16.3■□□□□ 0.2
SNX3-203ENST00000368979 WFDC10BQ8IUB3 73 aa16.3■□□□□ 0.2
SNX3-203ENST00000368979 SEC11AP67812 179 aa16.29■□□□□ 0.2
SNX3-203ENST00000368979 IGLV5-45A0A087WSX0 123 aa16.29■□□□□ 0.2
SNX3-203ENST00000368979 IGKV2D-26A0A0A0MRZ7 120 aa16.29■□□□□ 0.2
SNX3-203ENST00000368979 PCP4L1A6NKN8 68 aa16.29■□□□□ 0.2
SNX3-203ENST00000368979 C14orf144Q96I85 54 aa16.29■□□□□ 0.2
SNX3-203ENST00000368979 TGP01266 2768 aa16.28■□□□□ 0.2
SNX3-203ENST00000368979 HERVK_113P63121 156 aa16.28■□□□□ 0.2
SNX3-203ENST00000368979 GEMIN7Q9H840 131 aaKnown RBP16.28■□□□□ 0.2
SNX3-203ENST00000368979 TMEM223A0PJW6 202 aa16.27■□□□□ 0.2
SNX3-203ENST00000368979 E9PLD3 99 aa16.27■□□□□ 0.2
SNX3-203ENST00000368979 ANGP03950 147 aaKnown RBP16.27■□□□□ 0.2
SNX3-203ENST00000368979 COX6A2Q02221 97 aa16.27■□□□□ 0.2
SNX3-203ENST00000368979 IGKV3OR2-268A0A0C4DH90 116 aa16.26■□□□□ 0.19
SNX3-203ENST00000368979 LINC00959A0A1B0GUT2 108 aa16.26■□□□□ 0.19
SNX3-203ENST00000368979 COX8AP10176 69 aa16.26■□□□□ 0.19
SNX3-203ENST00000368979 HERVK_113P61574 105 aa16.26■□□□□ 0.19
SNX3-203ENST00000368979 LINC00269Q8N2A0 174 aa16.26■□□□□ 0.19
SNX3-203ENST00000368979 MIEN1Q9BRT3 115 aa16.26■□□□□ 0.19
SNX3-203ENST00000368979 NMUP48645 174 aa16.25■□□□□ 0.19
SNX3-203ENST00000368979 UQCR10Q9UDW1 63 aa16.25■□□□□ 0.19
SNX3-203ENST00000368979 MRPS16Q9Y3D3 137 aaKnown RBP16.25■□□□□ 0.19
SNX3-203ENST00000368979 LINC00588Q9Y4M8 146 aa16.25■□□□□ 0.19
SNX3-203ENST00000368979 NUPR2A6NF83 97 aa16.24■□□□□ 0.19
SNX3-203ENST00000368979 LINC00469Q8N7U9 141 aa16.24■□□□□ 0.19
SNX3-203ENST00000368979 CDKN2A-AS1Q9UH64 79 aa16.24■□□□□ 0.19
SNX3-203ENST00000368979 CLPSL2Q6UWE3 100 aa16.24■□□□□ 0.19
SNX3-203ENST00000368979 APLNQ9ULZ1 77 aa16.24■□□□□ 0.19
SNX3-203ENST00000368979 IGHV3-30P01768 117 aa16.23■□□□□ 0.19
SNX3-203ENST00000368979 IGHV3-33P01772 117 aa16.23■□□□□ 0.19
SNX3-203ENST00000368979 IGHV3-30-3P0DP02 117 aa16.23■□□□□ 0.19
SNX3-203ENST00000368979 IGHV3-30-5P0DP03 117 aa16.23■□□□□ 0.19
SNX3-203ENST00000368979 CCL18P55774 89 aa16.23■□□□□ 0.19
SNX3-203ENST00000368979 REG3AQ06141 175 aa16.23■□□□□ 0.19
SNX3-203ENST00000368979 DDTP30046 118 aa16.22■□□□□ 0.19
SNX3-203ENST00000368979 SLC25A34Q6PIV7 304 aa16.22■□□□□ 0.19
SNX3-203ENST00000368979 PCP2Q8IVA1 136 aa16.22■□□□□ 0.19
SNX3-203ENST00000368979 PRR34Q9NV39 138 aa16.22■□□□□ 0.19
SNX3-203ENST00000368979 TP73-AS1Q9UF72 201 aa16.22■□□□□ 0.19
SNX3-203ENST00000368979 CCL25O15444 150 aa16.21■□□□□ 0.19
SNX3-203ENST00000368979 LINC01556Q5JQF7 62 aa16.21■□□□□ 0.19
SNX3-203ENST00000368979 KLK12Q9UKR0 248 aa16.21■□□□□ 0.19
SNX3-203ENST00000368979 H3BRM9 83 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms