RNA–Protein interactions for RNA: ENST00000368912.7

SEMA6C-202, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 3,697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-202ENST00000368912 FAM223AQ8IWN6 122 aa11.48□□□□□ -0.57
SEMA6C-202ENST00000368912 Q6ZSV7 163 aa11.48□□□□□ -0.57
SEMA6C-202ENST00000368912 LINC01561Q8N1V8 128 aa11.48□□□□□ -0.57
SEMA6C-202ENST00000368912 FAM110DQ8TAY7 271 aaPredicted RBP11.48□□□□□ -0.57
SEMA6C-202ENST00000368912 CTSGP08311 255 aa11.48□□□□□ -0.57
SEMA6C-202ENST00000368912 OTOGQ6ZRI0 2925 aa11.47□□□□□ -0.57
SEMA6C-202ENST00000368912 A6NDX4 124 aa11.47□□□□□ -0.57
SEMA6C-202ENST00000368912 C18orf65Q6ZTR6 163 aa11.47□□□□□ -0.57
SEMA6C-202ENST00000368912 Q8N6K4 173 aa11.47□□□□□ -0.57
SEMA6C-202ENST00000368912 CXCL5P42830 114 aa11.47□□□□□ -0.57
SEMA6C-202ENST00000368912 ZNF491Q8N8L2 437 aa11.47□□□□□ -0.57
SEMA6C-202ENST00000368912 C20orf197Q8N268 126 aa11.47□□□□□ -0.57
SEMA6C-202ENST00000368912 UNQ9165/PRO28630Q6UXU0 137 aa11.46□□□□□ -0.57
SEMA6C-202ENST00000368912 EIF4EBP3O60516 100 aaPredicted RBP11.46□□□□□ -0.57
SEMA6C-202ENST00000368912 TOMM6Q96B49 74 aa11.46□□□□□ -0.58
SEMA6C-202ENST00000368912 TRBV6-1A0A0K0K1D8 114 aa11.45□□□□□ -0.58
SEMA6C-202ENST00000368912 M0R381 172 aa11.45□□□□□ -0.58
SEMA6C-202ENST00000368912 SUMO2P61956 95 aaKnown RBP11.45□□□□□ -0.58
SEMA6C-202ENST00000368912 USP17L23D6RBM5 183 aa11.45□□□□□ -0.58
SEMA6C-202ENST00000368912 LY6G6DO95868 133 aa11.45□□□□□ -0.58
SEMA6C-202ENST00000368912 NRACQ8N912 160 aa11.45□□□□□ -0.58
SEMA6C-202ENST00000368912 TMEM223A0PJW6 202 aa11.45□□□□□ -0.58
SEMA6C-202ENST00000368912 DNAL4O96015 105 aa11.45□□□□□ -0.58
SEMA6C-202ENST00000368912 COL6A5A8TX70 2615 aa11.44□□□□□ -0.58
SEMA6C-202ENST00000368912 LINC01546A6NGU7 62 aa11.44□□□□□ -0.58
SEMA6C-202ENST00000368912 C5orf38Q86SI9 138 aa11.44□□□□□ -0.58
SEMA6C-202ENST00000368912 CCDC140Q96MF4 163 aa11.44□□□□□ -0.58
SEMA6C-202ENST00000368912 TMEM14CQ9P0S9 112 aa11.44□□□□□ -0.58
SEMA6C-202ENST00000368912 A0A0U1RRA0 63 aa11.43□□□□□ -0.58
SEMA6C-202ENST00000368912 LST1O00453 97 aa11.43□□□□□ -0.58
SEMA6C-202ENST00000368912 DAZ2Q13117 558 aaKnown RBP11.43□□□□□ -0.58
SEMA6C-202ENST00000368912 DAZ4Q86SG3 579 aaKnown RBP11.43□□□□□ -0.58
SEMA6C-202ENST00000368912 RPL39LQ96EH5 51 aaKnown RBP11.43□□□□□ -0.58
SEMA6C-202ENST00000368912 DAZ1Q9NQZ3 744 aaKnown RBP11.43□□□□□ -0.58
SEMA6C-202ENST00000368912 DAZ3Q9NR90 486 aaKnown RBP11.43□□□□□ -0.58
SEMA6C-202ENST00000368912 TRAV12-2A0A075B6T6 113 aa11.43□□□□□ -0.58
SEMA6C-202ENST00000368912 DNAJC9-AS1A6NH13 148 aa11.43□□□□□ -0.58
SEMA6C-202ENST00000368912 I3L3M4 83 aa11.43□□□□□ -0.58
SEMA6C-202ENST00000368912 TIMM21Q9BVV7 248 aa11.43□□□□□ -0.58
SEMA6C-202ENST00000368912 NDUFC2O95298 119 aa11.42□□□□□ -0.58
SEMA6C-202ENST00000368912 FHL2Q14192 279 aa11.42□□□□□ -0.58
SEMA6C-202ENST00000368912 TP53TG1Q9Y2A0 90 aa11.42□□□□□ -0.58
SEMA6C-202ENST00000368912 STAB1Q9NY15 2570 aa11.42□□□□□ -0.58
SEMA6C-202ENST00000368912 S100A4P26447 101 aaKnown RBP11.41□□□□□ -0.58
SEMA6C-202ENST00000368912 RBM3P98179 157 aaKnown RBP11.41□□□□□ -0.58
SEMA6C-202ENST00000368912 PVRIGQ6DKI7 326 aa11.41□□□□□ -0.58
SEMA6C-202ENST00000368912 C20orf173Q96LM9 149 aa11.41□□□□□ -0.58
SEMA6C-202ENST00000368912 KNCNA6PVL3 124 aa11.41□□□□□ -0.58
SEMA6C-202ENST00000368912 IGHG2P01859 326 aa11.41□□□□□ -0.58
SEMA6C-202ENST00000368912 KRTAP1-3Q8IUG1 177 aa11.41□□□□□ -0.58
SEMA6C-202ENST00000368912 A0A096LNT2 108 aa11.41□□□□□ -0.58
SEMA6C-202ENST00000368912 RBMY1BA6NDE4 496 aaKnown RBP11.41□□□□□ -0.58
SEMA6C-202ENST00000368912 RBMY1EA6NEQ0 496 aaKnown RBP11.41□□□□□ -0.58
SEMA6C-202ENST00000368912 RBMY1DP0C7P1 496 aaKnown RBP11.41□□□□□ -0.58
SEMA6C-202ENST00000368912 RBMY1A1P0DJD3 496 aaKnown RBP11.41□□□□□ -0.58
SEMA6C-202ENST00000368912 RBMY1CP0DJD4 496 aa11.41□□□□□ -0.58
SEMA6C-202ENST00000368912 SLURP1P55000 103 aa11.41□□□□□ -0.58
SEMA6C-202ENST00000368912 RBMY1FQ15415 496 aaKnown RBP11.41□□□□□ -0.58
SEMA6C-202ENST00000368912 LYPD1Q8N2G4 141 aa11.41□□□□□ -0.58
SEMA6C-202ENST00000368912 F6UB75 175 aa11.4□□□□□ -0.58
SEMA6C-202ENST00000368912 BAALC-AS2P0C853 105 aa11.4□□□□□ -0.58
SEMA6C-202ENST00000368912 S100A7L2Q5SY68 101 aa11.4□□□□□ -0.58
SEMA6C-202ENST00000368912 SLC50A1Q9BRV3 221 aa11.4□□□□□ -0.58
SEMA6C-202ENST00000368912 DEFB121Q5J5C9 76 aa11.4□□□□□ -0.58
SEMA6C-202ENST00000368912 Q6YL49 198 aa11.39□□□□□ -0.59
SEMA6C-202ENST00000368912 RHPN1-AS1Q9BWJ2 59 aa11.39□□□□□ -0.59
SEMA6C-202ENST00000368912 TIRAPP58753 221 aa11.39□□□□□ -0.59
SEMA6C-202ENST00000368912 C9orf139Q6ZV77 190 aa11.39□□□□□ -0.59
SEMA6C-202ENST00000368912 PRIMA1Q86XR5 153 aa11.39□□□□□ -0.59
SEMA6C-202ENST00000368912 GHRHP01286 108 aa11.38□□□□□ -0.59
SEMA6C-202ENST00000368912 LINC00482Q8N8I6 264 aa11.38□□□□□ -0.59
SEMA6C-202ENST00000368912 RPL39P62891 51 aaKnown RBP11.38□□□□□ -0.59
SEMA6C-202ENST00000368912 DYNLRB2Q8TF09 96 aa11.38□□□□□ -0.59
SEMA6C-202ENST00000368912 TMEM190Q8WZ59 177 aa11.38□□□□□ -0.59
SEMA6C-202ENST00000368912 ESM1Q9NQ30 184 aa11.38□□□□□ -0.59
SEMA6C-202ENST00000368912 SERP1Q9Y6X1 66 aa11.38□□□□□ -0.59
SEMA6C-202ENST00000368912 ZNF469Q96JG9 3925 aaPredicted RBP11.37□□□□□ -0.59
SEMA6C-202ENST00000368912 PDZD2O15018 2839 aa11.37□□□□□ -0.59
SEMA6C-202ENST00000368912 CR1P17927 2039 aa11.37□□□□□ -0.59
SEMA6C-202ENST00000368912 FAM223BA6NKX1 122 aa11.37□□□□□ -0.59
SEMA6C-202ENST00000368912 MPLKIPQ8TAP9 179 aa11.37□□□□□ -0.59
SEMA6C-202ENST00000368912 SMIM26A0A096LP01 95 aa11.37□□□□□ -0.59
SEMA6C-202ENST00000368912 INAFM2P0DMQ5 153 aa11.37□□□□□ -0.59
SEMA6C-202ENST00000368912 TRAV23DV6A0A075B6W5 121 aa11.36□□□□□ -0.59
SEMA6C-202ENST00000368912 IGHV4OR15-8A0A075B7B6 117 aa11.36□□□□□ -0.59
SEMA6C-202ENST00000368912 A0A087WW49 117 aa11.36□□□□□ -0.59
SEMA6C-202ENST00000368912 F8W735 103 aaPredicted RBP11.36□□□□□ -0.59
SEMA6C-202ENST00000368912 IGLV4-69A0A075B6H9 119 aa11.36□□□□□ -0.59
SEMA6C-202ENST00000368912 F5H697 171 aa11.36□□□□□ -0.59
SEMA6C-202ENST00000368912 UPK3BQ9BT76 320 aa11.36□□□□□ -0.59
SEMA6C-202ENST00000368912 NSD1Q96L73 2696 aaPredicted RBP11.35□□□□□ -0.59
SEMA6C-202ENST00000368912 IGHV3OR16-12A0A075B7B8 117 aa11.35□□□□□ -0.59
SEMA6C-202ENST00000368912 NXPH4O95158 308 aa11.35□□□□□ -0.59
SEMA6C-202ENST00000368912 PRAC2D3DTV9 90 aa11.34□□□□□ -0.59
SEMA6C-202ENST00000368912 H3BRN7 92 aa11.34□□□□□ -0.59
SEMA6C-202ENST00000368912 CD28P10747 220 aa11.34□□□□□ -0.59
SEMA6C-202ENST00000368912 SS18Q15532 418 aa11.34□□□□□ -0.59
SEMA6C-202ENST00000368912 MGAM2Q2M2H8 2515 aa11.33□□□□□ -0.59
SEMA6C-202ENST00000368912 HOXD3P31249 432 aaPredicted RBP11.33□□□□□ -0.59
SEMA6C-202ENST00000368912 A0A0J9YXY3 114 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms