RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 EDN2P20800 178 aa13.49□□□□□ -0.25
SNX27-202ENST00000368841 CCKP06307 115 aa13.49□□□□□ -0.25
SNX27-202ENST00000368841 LINC00308Q8TCZ7 52 aa13.48□□□□□ -0.25
SNX27-202ENST00000368841 SPRY4Q9C004 299 aa13.48□□□□□ -0.25
SNX27-202ENST00000368841 ZFAND3Q9H8U3 227 aa13.46□□□□□ -0.25
SNX27-202ENST00000368841 A0A1B0GXF2 115 aa13.46□□□□□ -0.25
SNX27-202ENST00000368841 SYCNQ0VAF6 134 aa13.46□□□□□ -0.25
SNX27-202ENST00000368841 KPRPQ5T749 579 aaPredicted RBP13.46□□□□□ -0.25
SNX27-202ENST00000368841 OXLD1Q5BKU9 147 aa13.45□□□□□ -0.26
SNX27-202ENST00000368841 C11orf1Q9H5F2 150 aa13.45□□□□□ -0.26
SNX27-202ENST00000368841 TRBV6-5A0A0K0K1A5 114 aa13.45□□□□□ -0.26
SNX27-202ENST00000368841 M0QY20 66 aa13.45□□□□□ -0.26
SNX27-202ENST00000368841 TNCP24821 2201 aa13.44□□□□□ -0.26
SNX27-202ENST00000368841 LINC00643Q86TS7 51 aa13.44□□□□□ -0.26
SNX27-202ENST00000368841 ZNF702PQ9H963 129 aa13.44□□□□□ -0.26
SNX27-202ENST00000368841 PLAC8L1A1L4L8 177 aa13.43□□□□□ -0.26
SNX27-202ENST00000368841 RNF185Q96GF1 192 aa13.43□□□□□ -0.26
SNX27-202ENST00000368841 COL4A4P53420 1690 aaPredicted RBP13.43□□□□□ -0.26
SNX27-202ENST00000368841 FAM236DA0A1B0GTK5 79 aa13.43□□□□□ -0.26
SNX27-202ENST00000368841 FAM236CP0DP71 79 aa13.43□□□□□ -0.26
SNX27-202ENST00000368841 PRR9Q5T870 116 aa13.43□□□□□ -0.26
SNX27-202ENST00000368841 KIR2DL5BQ8NHK3 375 aa13.43□□□□□ -0.26
SNX27-202ENST00000368841 SPTAN1Q13813 2472 aaKnown RBP13.43□□□□□ -0.26
SNX27-202ENST00000368841 MBD6Q96DN6 1003 aa13.43□□□□□ -0.26
SNX27-202ENST00000368841 TRAV10A0A0B4J240 114 aa13.42□□□□□ -0.26
SNX27-202ENST00000368841 LRRC75A-AS1Q8N1F1 130 aa13.42□□□□□ -0.26
SNX27-202ENST00000368841 GPR179Q6PRD1 2367 aa13.41□□□□□ -0.26
SNX27-202ENST00000368841 SMIM9A6NGZ8 99 aa13.41□□□□□ -0.26
SNX27-202ENST00000368841 MIFP14174 115 aa13.41□□□□□ -0.26
SNX27-202ENST00000368841 FBXL19-AS1Q494R0 122 aa13.41□□□□□ -0.26
SNX27-202ENST00000368841 SPANXB1Q9NS25 103 aaPredicted RBP13.41□□□□□ -0.26
SNX27-202ENST00000368841 ALPK3Q96L96 1907 aa13.41□□□□□ -0.26
SNX27-202ENST00000368841 SHISA2Q6UWI4 295 aa13.4□□□□□ -0.26
SNX27-202ENST00000368841 NBASA2RRP1 2371 aa13.4□□□□□ -0.26
SNX27-202ENST00000368841 MRPS12O15235 138 aaKnown RBP13.4□□□□□ -0.26
SNX27-202ENST00000368841 UBE2D2P62837 147 aa13.4□□□□□ -0.26
SNX27-202ENST00000368841 MED12LQ86YW9 2145 aa13.39□□□□□ -0.27
SNX27-202ENST00000368841 GAS8-AS1O95177 125 aa13.39□□□□□ -0.27
SNX27-202ENST00000368841 PDE6GP18545 87 aa13.39□□□□□ -0.27
SNX27-202ENST00000368841 ZNF295-AS1Q8N0V1 137 aa13.39□□□□□ -0.27
SNX27-202ENST00000368841 CEP192Q8TEP8 1941 aa13.39□□□□□ -0.27
SNX27-202ENST00000368841 RBX1P62877 108 aa13.39□□□□□ -0.27
SNX27-202ENST00000368841 NDUFA7O95182 113 aa13.38□□□□□ -0.27
SNX27-202ENST00000368841 ODF3Q96PU9 254 aa13.38□□□□□ -0.27
SNX27-202ENST00000368841 TSHBP01222 138 aa13.37□□□□□ -0.27
SNX27-202ENST00000368841 P0C879 139 aa13.37□□□□□ -0.27
SNX27-202ENST00000368841 Q6ZQY7 126 aa13.37□□□□□ -0.27
SNX27-202ENST00000368841 CIRBP-AS1Q8TBR5 109 aa13.37□□□□□ -0.27
SNX27-202ENST00000368841 H7C423 109 aa13.37□□□□□ -0.27
SNX27-202ENST00000368841 MED13LQ71F56 2210 aa13.37□□□□□ -0.27
SNX27-202ENST00000368841 RIF1Q5UIP0 2472 aaKnown RBP13.37□□□□□ -0.27
SNX27-202ENST00000368841 IBA57-AS1B1ANH7 110 aa13.37□□□□□ -0.27
SNX27-202ENST00000368841 X6R8D5 127 aa13.37□□□□□ -0.27
SNX27-202ENST00000368841 K7ERS5 55 aa13.37□□□□□ -0.27
SNX27-202ENST00000368841 SMIM11BQ8TCY0 68 aa13.37□□□□□ -0.27
SNX27-202ENST00000368841 FREM1Q5H8C1 2179 aa13.36□□□□□ -0.27
SNX27-202ENST00000368841 LINC01006Q8NI28 216 aa13.36□□□□□ -0.27
SNX27-202ENST00000368841 PCNX3Q9H6A9 2034 aa13.36□□□□□ -0.27
SNX27-202ENST00000368841 BRI3O95415 125 aa13.36□□□□□ -0.27
SNX27-202ENST00000368841 PCDH15Q96QU1 1955 aa13.36□□□□□ -0.27
SNX27-202ENST00000368841 C9orf116Q5BN46 136 aaPredicted RBP13.36□□□□□ -0.27
SNX27-202ENST00000368841 LINC00959A0A1B0GUT2 108 aa13.35□□□□□ -0.27
SNX27-202ENST00000368841 CRIP2P52943 208 aaPredicted RBP13.35□□□□□ -0.27
SNX27-202ENST00000368841 CDSNQ15517 529 aa13.34□□□□□ -0.27
SNX27-202ENST00000368841 C11orf71Q6IPW1 123 aa13.34□□□□□ -0.27
SNX27-202ENST00000368841 CELA1Q9UNI1 258 aa13.34□□□□□ -0.27
SNX27-202ENST00000368841 TRBV6-4A0A1B0GX49 114 aa13.34□□□□□ -0.27
SNX27-202ENST00000368841 IGLV4-69A0A075B6H9 119 aa13.33□□□□□ -0.27
SNX27-202ENST00000368841 RNASE3P12724 160 aaKnown RBP13.32□□□□□ -0.28
SNX27-202ENST00000368841 CRIP3Q6Q6R5 217 aa13.32□□□□□ -0.28
SNX27-202ENST00000368841 NDUFC2-KCTD14E9PQ53 114 aa13.32□□□□□ -0.28
SNX27-202ENST00000368841 IGLV2-11P01706 119 aa13.32□□□□□ -0.28
SNX27-202ENST00000368841 C11orf21Q9P2W6 132 aa13.32□□□□□ -0.28
SNX27-202ENST00000368841 DSCAMO60469 2012 aa13.31□□□□□ -0.28
SNX27-202ENST00000368841 EIF4EBP1Q13541 118 aaPredicted RBP13.31□□□□□ -0.28
SNX27-202ENST00000368841 A6NED7 52 aa13.31□□□□□ -0.28
SNX27-202ENST00000368841 PRR15LQ9BU68 103 aa13.31□□□□□ -0.28
SNX27-202ENST00000368841 LOC107984640A0A0U1RRK4 108 aa13.31□□□□□ -0.28
SNX27-202ENST00000368841 PRR3P79522 188 aaKnown RBP13.31□□□□□ -0.28
SNX27-202ENST00000368841 M0R378 163 aa13.3□□□□□ -0.28
SNX27-202ENST00000368841 CD164L2Q6UWJ8 174 aa13.29□□□□□ -0.28
SNX27-202ENST00000368841 TRBV27A0A0K0K1C4 114 aa13.28□□□□□ -0.28
SNX27-202ENST00000368841 SERP1Q9Y6X1 66 aa13.28□□□□□ -0.28
SNX27-202ENST00000368841 RAI1Q7Z5J4 1906 aaPredicted RBP13.28□□□□□ -0.28
SNX27-202ENST00000368841 Q6ZVQ6 151 aa13.27□□□□□ -0.28
SNX27-202ENST00000368841 NRACQ8N912 160 aa13.27□□□□□ -0.28
SNX27-202ENST00000368841 PSMG3-AS1Q96PY0 264 aa13.27□□□□□ -0.28
SNX27-202ENST00000368841 UQCRQO14949 82 aa13.27□□□□□ -0.29
SNX27-202ENST00000368841 ESRGQ1W209 222 aa13.27□□□□□ -0.29
SNX27-202ENST00000368841 LELP1Q5T871 98 aa13.27□□□□□ -0.29
SNX27-202ENST00000368841 DEFB116Q30KQ4 102 aa13.26□□□□□ -0.29
SNX27-202ENST00000368841 ZNF706Q9Y5V0 76 aaPredicted RBP13.26□□□□□ -0.29
SNX27-202ENST00000368841 M0QXV9 152 aa13.26□□□□□ -0.29
SNX27-202ENST00000368841 U3KQK5 164 aa13.26□□□□□ -0.29
SNX27-202ENST00000368841 FAM240AA0A1B0GVK7 77 aa13.25□□□□□ -0.29
SNX27-202ENST00000368841 LINC00574Q9H8X3 128 aa13.25□□□□□ -0.29
SNX27-202ENST00000368841 TRBV30A0A0K0K1B3 111 aa13.25□□□□□ -0.29
SNX27-202ENST00000368841 MRPL55Q7Z7F7 128 aaKnown RBP13.25□□□□□ -0.29
SNX27-202ENST00000368841 KRTAP10-9P60411 292 aa13.25□□□□□ -0.29
SNX27-202ENST00000368841 LTBP2Q14767 1821 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms