RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 Q6ZUT4 128 aa9.29□□□□□ -0.92
TPM3-211ENST00000368531 ZNF664Q8N3J9 261 aa9.29□□□□□ -0.92
TPM3-211ENST00000368531 RMI2Q96E14 147 aa9.29□□□□□ -0.92
TPM3-211ENST00000368531 URB1-AS1Q96HZ7 61 aa9.29□□□□□ -0.92
TPM3-211ENST00000368531 CDC42SE2Q9NRR3 84 aa9.29□□□□□ -0.92
TPM3-211ENST00000368531 PRR34Q9NV39 138 aa9.29□□□□□ -0.92
TPM3-211ENST00000368531 KMT2CQ8NEZ4 4911 aaKnown RBP9.28□□□□□ -0.92
TPM3-211ENST00000368531 MIAQ16674 131 aa9.28□□□□□ -0.92
TPM3-211ENST00000368531 BAGE3Q86Y29 109 aa9.28□□□□□ -0.92
TPM3-211ENST00000368531 TIMM21Q9BVV7 248 aa9.28□□□□□ -0.92
TPM3-211ENST00000368531 C1orf43Q9BWL3 253 aa9.28□□□□□ -0.92
TPM3-211ENST00000368531 TM2D2Q9BX73 214 aa9.28□□□□□ -0.92
TPM3-211ENST00000368531 SPANXA1Q9NS26 97 aa9.28□□□□□ -0.92
TPM3-211ENST00000368531 AP5S1Q9NUS5 200 aa9.28□□□□□ -0.92
TPM3-211ENST00000368531 KMT2AQ03164 3969 aa9.28□□□□□ -0.92
TPM3-211ENST00000368531 LINC01546A6NGU7 62 aa9.27□□□□□ -0.93
TPM3-211ENST00000368531 G0S2P27469 103 aa9.27□□□□□ -0.93
TPM3-211ENST00000368531 RAB5BP61020 215 aa9.27□□□□□ -0.93
TPM3-211ENST00000368531 PMCHL1Q16048 86 aa9.27□□□□□ -0.93
TPM3-211ENST00000368531 CSDC2Q9Y534 153 aaKnown RBP9.27□□□□□ -0.93
TPM3-211ENST00000368531 HYDINQ4G0P3 5121 aa9.27□□□□□ -0.93
TPM3-211ENST00000368531 LINC00336Q6ZUF6 198 aa9.26□□□□□ -0.93
TPM3-211ENST00000368531 ZC2HC1BQ5TFG8 222 aa9.25□□□□□ -0.93
TPM3-211ENST00000368531 MAPKAPK5-AS1Q8N8E1 139 aa9.25□□□□□ -0.93
TPM3-211ENST00000368531 FAM104AQ969W3 186 aa9.25□□□□□ -0.93
TPM3-211ENST00000368531 TOMM6Q96B49 74 aa9.25□□□□□ -0.93
TPM3-211ENST00000368531 SCGB3A1Q96QR1 104 aa9.25□□□□□ -0.93
TPM3-211ENST00000368531 DNAH6Q9C0G6 4158 aa9.25□□□□□ -0.93
TPM3-211ENST00000368531 IGLV4-3A0A075B6K6 122 aa9.24□□□□□ -0.93
TPM3-211ENST00000368531 TRAV13-1A0A0B4J241 112 aa9.24□□□□□ -0.93
TPM3-211ENST00000368531 TRAV8-4A0A0B4J246 113 aa9.24□□□□□ -0.93
TPM3-211ENST00000368531 LINC00959A0A1B0GUT2 108 aa9.24□□□□□ -0.93
TPM3-211ENST00000368531 LECT2O14960 151 aa9.24□□□□□ -0.93
TPM3-211ENST00000368531 SS18Q15532 418 aa9.24□□□□□ -0.93
TPM3-211ENST00000368531 BAALCQ8WXS3 180 aa9.24□□□□□ -0.93
TPM3-211ENST00000368531 PYGO1Q9Y3Y4 419 aa9.24□□□□□ -0.93
TPM3-211ENST00000368531 COX11Q9Y6N1 276 aa9.24□□□□□ -0.93
TPM3-211ENST00000368531 GAGE12HA6NDE8 117 aa9.23□□□□□ -0.93
TPM3-211ENST00000368531 IGIPA6NJ69 53 aa9.23□□□□□ -0.93
TPM3-211ENST00000368531 MRPS36P82909 103 aaKnown RBP9.23□□□□□ -0.93
TPM3-211ENST00000368531 CHCHD10Q8WYQ3 142 aaPredicted RBP9.23□□□□□ -0.93
TPM3-211ENST00000368531 CHCHD1Q96BP2 118 aaKnown RBP9.23□□□□□ -0.93
TPM3-211ENST00000368531 TMEM141Q96I45 108 aa9.23□□□□□ -0.93
TPM3-211ENST00000368531 A0A096LNJ9 63 aa9.22□□□□□ -0.93
TPM3-211ENST00000368531 IFITM10A6NMD0 228 aa9.22□□□□□ -0.93
TPM3-211ENST00000368531 CCL25O15444 150 aa9.22□□□□□ -0.93
TPM3-211ENST00000368531 HIST1H2BKO60814 126 aa9.22□□□□□ -0.93
TPM3-211ENST00000368531 HSBP1O75506 76 aa9.22□□□□□ -0.93
TPM3-211ENST00000368531 SERF1AO75920 110 aa9.22□□□□□ -0.93
TPM3-211ENST00000368531 HBDP02042 147 aa9.22□□□□□ -0.93
TPM3-211ENST00000368531 HIST1H2BJP06899 126 aa9.22□□□□□ -0.93
TPM3-211ENST00000368531 HIST1H2BOP23527 126 aa9.22□□□□□ -0.93
TPM3-211ENST00000368531 HIST1H2BBP33778 126 aa9.22□□□□□ -0.93
TPM3-211ENST00000368531 XCL1P47992 114 aa9.22□□□□□ -0.93
TPM3-211ENST00000368531 HIST1H2BDP58876 126 aa9.22□□□□□ -0.93
TPM3-211ENST00000368531 HIST1H2BCP62807 126 aa9.22□□□□□ -0.93
TPM3-211ENST00000368531 HIST2H2BEQ16778 126 aa9.22□□□□□ -0.93
TPM3-211ENST00000368531 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.22□□□□□ -0.93
TPM3-211ENST00000368531 KRTAP26-1Q6PEX3 210 aa9.22□□□□□ -0.93
TPM3-211ENST00000368531 Q6ZN92 141 aa9.22□□□□□ -0.93
TPM3-211ENST00000368531 HIST1H2BHQ93079 126 aa9.22□□□□□ -0.93
TPM3-211ENST00000368531 HIST1H2BNQ99877 126 aa9.22□□□□□ -0.93
TPM3-211ENST00000368531 HIST1H2BMQ99879 126 aa9.22□□□□□ -0.93
TPM3-211ENST00000368531 A0A087WTM6 91 aa9.21□□□□□ -0.94
TPM3-211ENST00000368531 C1orf196B1AJZ1 125 aa9.21□□□□□ -0.94
TPM3-211ENST00000368531 TEX43Q6ZNM6 134 aa9.21□□□□□ -0.94
TPM3-211ENST00000368531 ERASQ7Z444 233 aa9.21□□□□□ -0.94
TPM3-211ENST00000368531 FAM19A2Q8N3H0 131 aa9.21□□□□□ -0.94
TPM3-211ENST00000368531 VCX2Q9H322 139 aa9.21□□□□□ -0.94
TPM3-211ENST00000368531 RYR2Q92736 4967 aa9.21□□□□□ -0.94
TPM3-211ENST00000368531 LRCOL1A6NCL2 159 aa9.2□□□□□ -0.94
TPM3-211ENST00000368531 EREGO14944 169 aa9.2□□□□□ -0.94
TPM3-211ENST00000368531 NUPR1O60356 82 aa9.2□□□□□ -0.94
TPM3-211ENST00000368531 LINC00310P59036 64 aa9.2□□□□□ -0.94
TPM3-211ENST00000368531 WFDC2Q14508 124 aa9.2□□□□□ -0.94
TPM3-211ENST00000368531 TIMM17AQ99595 171 aa9.2□□□□□ -0.94
TPM3-211ENST00000368531 LINC01549A6NIU2 74 aa9.19□□□□□ -0.94
TPM3-211ENST00000368531 FUSP35637 526 aaKnown RBP eCLIP9.19□□□□□ -0.94
TPM3-211ENST00000368531 LINC00173Q6ZV60 143 aa9.19□□□□□ -0.94
TPM3-211ENST00000368531 C2orf88Q9BSF0 95 aa9.19□□□□□ -0.94
TPM3-211ENST00000368531 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.18□□□□□ -0.94
TPM3-211ENST00000368531 NDUFA6P56556 154 aa9.18□□□□□ -0.94
TPM3-211ENST00000368531 PAPPA-AS1Q5QFB9 102 aa9.18□□□□□ -0.94
TPM3-211ENST00000368531 AMELXQ99217 191 aa9.18□□□□□ -0.94
TPM3-211ENST00000368531 USP17L23D6RBM5 183 aa9.17□□□□□ -0.94
TPM3-211ENST00000368531 NPSP0C0P6 89 aa9.17□□□□□ -0.94
TPM3-211ENST00000368531 FOXI1Q12951 378 aa9.17□□□□□ -0.94
TPM3-211ENST00000368531 PDZD11Q5EBL8 140 aa9.17□□□□□ -0.94
TPM3-211ENST00000368531 A0A1B0GVY2 172 aa9.16□□□□□ -0.94
TPM3-211ENST00000368531 ATP5LO75964 103 aa9.16□□□□□ -0.94
TPM3-211ENST00000368531 UBE2D1P51668 147 aa9.16□□□□□ -0.94
TPM3-211ENST00000368531 CD164L2Q6UWJ8 174 aa9.16□□□□□ -0.94
TPM3-211ENST00000368531 SPATA12Q7Z6I5 190 aa9.16□□□□□ -0.94
TPM3-211ENST00000368531 C5orf38Q86SI9 138 aa9.16□□□□□ -0.94
TPM3-211ENST00000368531 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.15□□□□□ -0.94
TPM3-211ENST00000368531 COX6A2Q02221 97 aa9.15□□□□□ -0.94
TPM3-211ENST00000368531 PMVKQ15126 192 aa9.15□□□□□ -0.94
TPM3-211ENST00000368531 Q8N814 137 aa9.15□□□□□ -0.94
TPM3-211ENST00000368531 RYR3Q15413 4870 aa9.15□□□□□ -0.94
TPM3-211ENST00000368531 A0A0J9YXV3 536 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms