RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 IGKV2D-28P01615 120 aa9.54□□□□□ -0.88
PTPRK-207ENST00000368226 RETNQ9HD89 108 aa9.54□□□□□ -0.88
PTPRK-207ENST00000368226 TRBV10-2A0A0K0K1G8 114 aa9.54□□□□□ -0.88
PTPRK-207ENST00000368226 TCL1BO95988 128 aa9.54□□□□□ -0.88
PTPRK-207ENST00000368226 SCXQ7RTU7 201 aa9.54□□□□□ -0.88
PTPRK-207ENST00000368226 TEN1Q86WV5 123 aa9.53□□□□□ -0.88
PTPRK-207ENST00000368226 ACYP1P07311 99 aa9.53□□□□□ -0.88
PTPRK-207ENST00000368226 A0A0J9YWU9 116 aa9.53□□□□□ -0.88
PTPRK-207ENST00000368226 Q8N6K4 173 aa9.53□□□□□ -0.88
PTPRK-207ENST00000368226 PPDPFQ9H3Y8 114 aa9.53□□□□□ -0.88
PTPRK-207ENST00000368226 ZNF22P17026 224 aaPredicted RBP9.53□□□□□ -0.88
PTPRK-207ENST00000368226 MP68P56378 58 aa9.53□□□□□ -0.88
PTPRK-207ENST00000368226 KPRPQ5T749 579 aaPredicted RBP9.53□□□□□ -0.88
PTPRK-207ENST00000368226 RNF185Q96GF1 192 aa9.53□□□□□ -0.88
PTPRK-207ENST00000368226 TMEM256-PLSCR3K7ERE1 68 aa9.52□□□□□ -0.88
PTPRK-207ENST00000368226 FSTL3O95633 263 aa9.52□□□□□ -0.88
PTPRK-207ENST00000368226 MBD6Q96DN6 1003 aa9.52□□□□□ -0.88
PTPRK-207ENST00000368226 ARHGAP32A7KAX9 2087 aa9.52□□□□□ -0.88
PTPRK-207ENST00000368226 HRCT1Q6UXD1 115 aa9.52□□□□□ -0.89
PTPRK-207ENST00000368226 TRAV10A0A0B4J240 114 aa9.52□□□□□ -0.89
PTPRK-207ENST00000368226 CITED1Q99966 193 aa9.52□□□□□ -0.89
PTPRK-207ENST00000368226 C11orf21Q9P2W6 132 aa9.52□□□□□ -0.89
PTPRK-207ENST00000368226 PRRC2AP48634 2157 aaKnown RBP9.51□□□□□ -0.89
PTPRK-207ENST00000368226 TMEM223A0PJW6 202 aa9.51□□□□□ -0.89
PTPRK-207ENST00000368226 JMJD7-PLA2G4BH0Y9G9 81 aa9.51□□□□□ -0.89
PTPRK-207ENST00000368226 IGLV2-11P01706 119 aa9.51□□□□□ -0.89
PTPRK-207ENST00000368226 SPATA12Q7Z6I5 190 aa9.51□□□□□ -0.89
PTPRK-207ENST00000368226 SPANXCQ9NY87 97 aa9.51□□□□□ -0.89
PTPRK-207ENST00000368226 PIEZO2Q9H5I5 2752 aa9.51□□□□□ -0.89
PTPRK-207ENST00000368226 CACNA1AO00555 2505 aa9.5□□□□□ -0.89
PTPRK-207ENST00000368226 IGKV4-1P06312 121 aa9.5□□□□□ -0.89
PTPRK-207ENST00000368226 RNASE3P12724 160 aaKnown RBP9.5□□□□□ -0.89
PTPRK-207ENST00000368226 GAS8-AS1O95177 125 aa9.5□□□□□ -0.89
PTPRK-207ENST00000368226 MAPKAPK5-AS1Q8N8E1 139 aa9.5□□□□□ -0.89
PTPRK-207ENST00000368226 NCOR2Q9Y618 2525 aa9.49□□□□□ -0.89
PTPRK-207ENST00000368226 TRBV6-4A0A1B0GX49 114 aa9.49□□□□□ -0.89
PTPRK-207ENST00000368226 RBX1P62877 108 aa9.49□□□□□ -0.89
PTPRK-207ENST00000368226 GOLGB1Q14789 3259 aaKnown RBP9.49□□□□□ -0.89
PTPRK-207ENST00000368226 IGLV1-40P01703 118 aa9.49□□□□□ -0.89
PTPRK-207ENST00000368226 PLXNB1O43157 2135 aa9.49□□□□□ -0.89
PTPRK-207ENST00000368226 SORL1Q92673 2214 aa9.49□□□□□ -0.89
PTPRK-207ENST00000368226 RPL37AP8A6NKH3 93 aa9.48□□□□□ -0.89
PTPRK-207ENST00000368226 IGHV4-30-4P0DP06 118 aa9.48□□□□□ -0.89
PTPRK-207ENST00000368226 IGF2RP11717 2491 aa9.48□□□□□ -0.89
PTPRK-207ENST00000368226 SYCNQ0VAF6 134 aa9.48□□□□□ -0.89
PTPRK-207ENST00000368226 TRAV23DV6A0A075B6W5 121 aa9.48□□□□□ -0.89
PTPRK-207ENST00000368226 A0A1W2PPR1 153 aa9.48□□□□□ -0.89
PTPRK-207ENST00000368226 PTPRSQ13332 1948 aa9.47□□□□□ -0.89
PTPRK-207ENST00000368226 BRI3O95415 125 aa9.47□□□□□ -0.89
PTPRK-207ENST00000368226 RNASE8Q8TDE3 154 aaKnown RBP9.47□□□□□ -0.89
PTPRK-207ENST00000368226 TSHBP01222 138 aa9.47□□□□□ -0.89
PTPRK-207ENST00000368226 LINC00308Q8TCZ7 52 aa9.47□□□□□ -0.89
PTPRK-207ENST00000368226 TEX49A0A1B0GTD5 131 aa9.46□□□□□ -0.89
PTPRK-207ENST00000368226 TMEM258P61165 79 aa9.46□□□□□ -0.89
PTPRK-207ENST00000368226 CCDC168Q8NDH2 2452 aa9.46□□□□□ -0.9
PTPRK-207ENST00000368226 H7C423 109 aa9.46□□□□□ -0.9
PTPRK-207ENST00000368226 C9orf85Q96MD7 179 aa9.45□□□□□ -0.9
PTPRK-207ENST00000368226 SPINK6Q6UWN8 80 aa9.45□□□□□ -0.9
PTPRK-207ENST00000368226 H3BQ85 93 aa9.45□□□□□ -0.9
PTPRK-207ENST00000368226 BPY2O14599 106 aa9.45□□□□□ -0.9
PTPRK-207ENST00000368226 C6orf99Q4VX62 202 aa9.44□□□□□ -0.9
PTPRK-207ENST00000368226 SDIM1Q6ZPB5 146 aa9.44□□□□□ -0.9
PTPRK-207ENST00000368226 C1orf158Q8N1D5 194 aa9.44□□□□□ -0.9
PTPRK-207ENST00000368226 UPK3BQ9BT76 320 aa9.44□□□□□ -0.9
PTPRK-207ENST00000368226 ABCA2Q9BZC7 2435 aa9.44□□□□□ -0.9
PTPRK-207ENST00000368226 H3BT86 120 aa9.44□□□□□ -0.9
PTPRK-207ENST00000368226 C3orf84H3BNL1 204 aa9.44□□□□□ -0.9
PTPRK-207ENST00000368226 WFDC10BQ8IUB3 73 aa9.44□□□□□ -0.9
PTPRK-207ENST00000368226 SPANXDQ9BXN6 97 aa9.44□□□□□ -0.9
PTPRK-207ENST00000368226 ATOX1O00244 68 aa9.43□□□□□ -0.9
PTPRK-207ENST00000368226 NDUFA7O95182 113 aa9.43□□□□□ -0.9
PTPRK-207ENST00000368226 NRACQ8N912 160 aa9.43□□□□□ -0.9
PTPRK-207ENST00000368226 NAV2Q8IVL1 2488 aa9.42□□□□□ -0.9
PTPRK-207ENST00000368226 RAI1Q7Z5J4 1906 aaPredicted RBP9.42□□□□□ -0.9
PTPRK-207ENST00000368226 LINC00959A0A1B0GUT2 108 aa9.42□□□□□ -0.9
PTPRK-207ENST00000368226 TRIAP1O43715 76 aa9.42□□□□□ -0.9
PTPRK-207ENST00000368226 C7orf33Q8WU49 177 aa9.42□□□□□ -0.9
PTPRK-207ENST00000368226 IBA57-AS1B1ANH7 110 aa9.42□□□□□ -0.9
PTPRK-207ENST00000368226 UBE2D4Q9Y2X8 147 aa9.42□□□□□ -0.9
PTPRK-207ENST00000368226 KLLNB2CW77 178 aa9.42□□□□□ -0.9
PTPRK-207ENST00000368226 U3KQK5 164 aa9.41□□□□□ -0.9
PTPRK-207ENST00000368226 LRP4O75096 1905 aa9.41□□□□□ -0.9
PTPRK-207ENST00000368226 IGLV9-49A0A0B4J1Y8 123 aa9.41□□□□□ -0.9
PTPRK-207ENST00000368226 ODF3L2Q3SX64 289 aa9.4□□□□□ -0.9
PTPRK-207ENST00000368226 LELP1Q5T871 98 aa9.4□□□□□ -0.9
PTPRK-207ENST00000368226 HCFC1P51610 2035 aa9.4□□□□□ -0.9
PTPRK-207ENST00000368226 TRBV27A0A0K0K1C4 114 aa9.4□□□□□ -0.9
PTPRK-207ENST00000368226 UBE2D1P51668 147 aa9.4□□□□□ -0.9
PTPRK-207ENST00000368226 CD164L2Q6UWJ8 174 aa9.4□□□□□ -0.9
PTPRK-207ENST00000368226 SPANXB1Q9NS25 103 aaPredicted RBP9.4□□□□□ -0.9
PTPRK-207ENST00000368226 ENHOQ6UWT2 76 aa9.39□□□□□ -0.91
PTPRK-207ENST00000368226 CRIP2P52943 208 aaPredicted RBP9.39□□□□□ -0.91
PTPRK-207ENST00000368226 TRBV6-5A0A0K0K1A5 114 aa9.38□□□□□ -0.91
PTPRK-207ENST00000368226 IGLV4-69A0A075B6H9 119 aa9.38□□□□□ -0.91
PTPRK-207ENST00000368226 KIR2DL5BQ8NHK3 375 aa9.37□□□□□ -0.91
PTPRK-207ENST00000368226 G3V4G9 280 aa9.37□□□□□ -0.91
PTPRK-207ENST00000368226 CCKP06307 115 aa9.37□□□□□ -0.91
PTPRK-207ENST00000368226 C10orf142B7Z368 130 aa9.36□□□□□ -0.91
PTPRK-207ENST00000368226 MRGPRG-AS1Q2M3A8 158 aa9.36□□□□□ -0.91
PTPRK-207ENST00000368226 C9orf116Q5BN46 136 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms