RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 GAGE6Q13070 117 aa4.65□□□□□ -1.67
RNU1-55P-201ENST00000365510 ESRGQ1W209 222 aa4.65□□□□□ -1.67
RNU1-55P-201ENST00000365510 DGAT2L7PQ6IED9 249 aa4.65□□□□□ -1.67
RNU1-55P-201ENST00000365510 Q6ZN92 141 aa4.65□□□□□ -1.67
RNU1-55P-201ENST00000365510 OR5A1Q8NGJ0 315 aa4.65□□□□□ -1.67
RNU1-55P-201ENST00000365510 TMEM141Q96I45 108 aa4.65□□□□□ -1.67
RNU1-55P-201ENST00000365510 TMEM101Q96IK0 257 aa4.65□□□□□ -1.67
RNU1-55P-201ENST00000365510 SCGB3A1Q96QR1 104 aa4.65□□□□□ -1.67
RNU1-55P-201ENST00000365510 TIMM17AQ99595 171 aa4.65□□□□□ -1.67
RNU1-55P-201ENST00000365510 APLNQ9ULZ1 77 aa4.65□□□□□ -1.67
RNU1-55P-201ENST00000365510 UBE2D4Q9Y2X8 147 aa4.65□□□□□ -1.67
RNU1-55P-201ENST00000365510 MRPS16Q9Y3D3 137 aaKnown RBP4.65□□□□□ -1.67
RNU1-55P-201ENST00000365510 DNAH2Q9P225 4427 aa4.64□□□□□ -1.67
RNU1-55P-201ENST00000365510 FABP4P15090 132 aa4.64□□□□□ -1.67
RNU1-55P-201ENST00000365510 PAPPA-AS1Q5QFB9 102 aa4.64□□□□□ -1.67
RNU1-55P-201ENST00000365510 ERASQ7Z444 233 aa4.64□□□□□ -1.67
RNU1-55P-201ENST00000365510 MRPL52Q86TS9 123 aaKnown RBP4.64□□□□□ -1.67
RNU1-55P-201ENST00000365510 IFI27L1Q96BM0 104 aa4.64□□□□□ -1.67
RNU1-55P-201ENST00000365510 HIST1H2BLQ99880 126 aa4.64□□□□□ -1.67
RNU1-55P-201ENST00000365510 UPK3BQ9BT76 320 aa4.64□□□□□ -1.67
RNU1-55P-201ENST00000365510 TIMM21Q9BVV7 248 aa4.64□□□□□ -1.67
RNU1-55P-201ENST00000365510 PYGO1Q9Y3Y4 419 aa4.64□□□□□ -1.67
RNU1-55P-201ENST00000365510 LINC00588Q9Y4M8 146 aa4.64□□□□□ -1.67
RNU1-55P-201ENST00000365510 CSDC2Q9Y534 153 aaKnown RBP4.64□□□□□ -1.67
RNU1-55P-201ENST00000365510 FAT2Q9NYQ8 4349 aa4.63□□□□□ -1.67
RNU1-55P-201ENST00000365510 IGIPA6NJ69 53 aa4.63□□□□□ -1.67
RNU1-55P-201ENST00000365510 MRPS36P82909 103 aaKnown RBP4.63□□□□□ -1.67
RNU1-55P-201ENST00000365510 MPV17L2Q567V2 206 aa4.63□□□□□ -1.67
RNU1-55P-201ENST00000365510 LINC01556Q5JQF7 62 aa4.63□□□□□ -1.67
RNU1-55P-201ENST00000365510 LGALS9CQ6DKI2 356 aa4.63□□□□□ -1.67
RNU1-55P-201ENST00000365510 Q6ZUT4 128 aa4.63□□□□□ -1.67
RNU1-55P-201ENST00000365510 WFDC10BQ8IUB3 73 aa4.63□□□□□ -1.67
RNU1-55P-201ENST00000365510 C2orf88Q9BSF0 95 aa4.63□□□□□ -1.67
RNU1-55P-201ENST00000365510 MAP1LC3CQ9BXW4 147 aa4.63□□□□□ -1.67
RNU1-55P-201ENST00000365510 DNAH11Q96DT5 4516 aa4.62□□□□□ -1.67
RNU1-55P-201ENST00000365510 IGLV4-3A0A075B6K6 122 aa4.62□□□□□ -1.67
RNU1-55P-201ENST00000365510 A0A1B0GUV1 79 aa4.62□□□□□ -1.67
RNU1-55P-201ENST00000365510 A0A1B0GVY2 172 aa4.62□□□□□ -1.67
RNU1-55P-201ENST00000365510 IFITM10A6NMD0 228 aa4.62□□□□□ -1.67
RNU1-55P-201ENST00000365510 SIVA1O15304 175 aa4.62□□□□□ -1.67
RNU1-55P-201ENST00000365510 DNAH10OSP0CZ25 163 aa4.62□□□□□ -1.67
RNU1-55P-201ENST00000365510 KRTDAPP60985 99 aa4.62□□□□□ -1.67
RNU1-55P-201ENST00000365510 RBX1P62877 108 aa4.62□□□□□ -1.67
RNU1-55P-201ENST00000365510 TEX43Q6ZNM6 134 aa4.62□□□□□ -1.67
RNU1-55P-201ENST00000365510 ZNF664Q8N3J9 261 aa4.62□□□□□ -1.67
RNU1-55P-201ENST00000365510 Q8N976 141 aa4.62□□□□□ -1.67
RNU1-55P-201ENST00000365510 BAALCQ8WXS3 180 aa4.62□□□□□ -1.67
RNU1-55P-201ENST00000365510 VCX2Q9H322 139 aa4.62□□□□□ -1.67
RNU1-55P-201ENST00000365510 IGLV4-60A0A075B6I1 120 aa4.61□□□□□ -1.67
RNU1-55P-201ENST00000365510 C20orf202A1L168 122 aa4.61□□□□□ -1.67
RNU1-55P-201ENST00000365510 H0Y8G0 127 aa4.61□□□□□ -1.67
RNU1-55P-201ENST00000365510 IGHV3-30P01768 117 aa4.61□□□□□ -1.67
RNU1-55P-201ENST00000365510 IGHV3-33P01772 117 aa4.61□□□□□ -1.67
RNU1-55P-201ENST00000365510 CRPP02741 224 aa4.61□□□□□ -1.67
RNU1-55P-201ENST00000365510 ANGP03950 147 aaKnown RBP4.61□□□□□ -1.67
RNU1-55P-201ENST00000365510 PRSS1P07477 247 aa4.61□□□□□ -1.67
RNU1-55P-201ENST00000365510 IGHV3-30-3P0DP02 117 aa4.61□□□□□ -1.67
RNU1-55P-201ENST00000365510 IGHV3-30-5P0DP03 117 aa4.61□□□□□ -1.67
RNU1-55P-201ENST00000365510 PMVKQ15126 192 aa4.61□□□□□ -1.67
RNU1-55P-201ENST00000365510 RNASE13Q5GAN3 156 aaKnown RBP4.61□□□□□ -1.67
RNU1-55P-201ENST00000365510 LINC00173Q6ZV60 143 aa4.61□□□□□ -1.67
RNU1-55P-201ENST00000365510 C10orf126Q8N4M7 172 aa4.61□□□□□ -1.67
RNU1-55P-201ENST00000365510 OR10D4PQ8NGN7 298 aa4.61□□□□□ -1.67
RNU1-55P-201ENST00000365510 CDC42SE2Q9NRR3 84 aa4.61□□□□□ -1.67
RNU1-55P-201ENST00000365510 PKD1P98161 4303 aa4.6□□□□□ -1.67
RNU1-55P-201ENST00000365510 TRAV9-2A0A087WT02 112 aa4.6□□□□□ -1.67
RNU1-55P-201ENST00000365510 TRAV12-1A0A0B4J245 112 aa4.6□□□□□ -1.67
RNU1-55P-201ENST00000365510 SYS1-DBNDD2H3BUS1 97 aa4.6□□□□□ -1.67
RNU1-55P-201ENST00000365510 K7EP13 123 aa4.6□□□□□ -1.67
RNU1-55P-201ENST00000365510 RTL8CO15255 209 aa4.6□□□□□ -1.67
RNU1-55P-201ENST00000365510 C3orf79P0CE67 100 aa4.6□□□□□ -1.67
RNU1-55P-201ENST00000365510 REG3AQ06141 175 aa4.6□□□□□ -1.67
RNU1-55P-201ENST00000365510 TTC32Q5I0X7 151 aa4.6□□□□□ -1.67
RNU1-55P-201ENST00000365510 CLPSL2Q6UWE3 100 aa4.6□□□□□ -1.67
RNU1-55P-201ENST00000365510 PET117Q6UWS5 81 aa4.6□□□□□ -1.67
RNU1-55P-201ENST00000365510 Q8N3U1 123 aa4.6□□□□□ -1.67
RNU1-55P-201ENST00000365510 AMELXQ99217 191 aa4.6□□□□□ -1.67
RNU1-55P-201ENST00000365510 OPRPNQ99935 248 aaPredicted RBP4.6□□□□□ -1.67
RNU1-55P-201ENST00000365510 CST9LQ9H4G1 147 aa4.6□□□□□ -1.67
RNU1-55P-201ENST00000365510 Q9H8V8 135 aa4.6□□□□□ -1.67
RNU1-55P-201ENST00000365510 TRAV13-1A0A0B4J241 112 aa4.59□□□□□ -1.67
RNU1-55P-201ENST00000365510 IGKV3OR2-268A0A0C4DH90 116 aa4.59□□□□□ -1.67
RNU1-55P-201ENST00000365510 PRSS29PA6NIE9 313 aa4.59□□□□□ -1.67
RNU1-55P-201ENST00000365510 F8VRH5 84 aa4.59□□□□□ -1.67
RNU1-55P-201ENST00000365510 AKR1D1P51857 326 aa4.59□□□□□ -1.67
RNU1-55P-201ENST00000365510 SPATA12Q7Z6I5 190 aa4.59□□□□□ -1.67
RNU1-55P-201ENST00000365510 LINC00269Q8N2A0 174 aa4.59□□□□□ -1.67
RNU1-55P-201ENST00000365510 KLK12Q9UKR0 248 aa4.59□□□□□ -1.67
RNU1-55P-201ENST00000365510 CHTOPQ9Y3Y2 248 aaKnown RBP4.59□□□□□ -1.67
RNU1-55P-201ENST00000365510 PKHD1P08F94 4074 aa4.59□□□□□ -1.68
RNU1-55P-201ENST00000365510 CCL25O15444 150 aa4.58□□□□□ -1.68
RNU1-55P-201ENST00000365510 PLNP26678 52 aa4.58□□□□□ -1.68
RNU1-55P-201ENST00000365510 UBE2D1P51668 147 aa4.58□□□□□ -1.68
RNU1-55P-201ENST00000365510 SEC11AP67812 179 aa4.58□□□□□ -1.68
RNU1-55P-201ENST00000365510 ODF1Q14990 250 aa4.58□□□□□ -1.68
RNU1-55P-201ENST00000365510 SS18Q15532 418 aa4.58□□□□□ -1.68
RNU1-55P-201ENST00000365510 MIAQ16674 131 aa4.58□□□□□ -1.68
RNU1-55P-201ENST00000365510 LINC01545Q5VT33 79 aa4.58□□□□□ -1.68
RNU1-55P-201ENST00000365510 FAM104AQ969W3 186 aa4.58□□□□□ -1.68
RNU1-55P-201ENST00000365510 UBE2WQ96B02 151 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms