RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 RNF185Q96GF1 192 aa9.95□□□□□ -0.82
LDB3-202ENST00000361373 C16orf95Q9H693 158 aa9.95□□□□□ -0.82
LDB3-202ENST00000361373 ZFYVE26Q68DK2 2539 aa9.95□□□□□ -0.82
LDB3-202ENST00000361373 CHD8Q9HCK8 2581 aa9.95□□□□□ -0.82
LDB3-202ENST00000361373 USP9XQ93008 2570 aaPredicted RBP9.95□□□□□ -0.82
LDB3-202ENST00000361373 A0A0B4J2C4 111 aa9.94□□□□□ -0.82
LDB3-202ENST00000361373 ZNF22P17026 224 aaPredicted RBP9.94□□□□□ -0.82
LDB3-202ENST00000361373 HIST2H2BDQ6DRA6 164 aa9.94□□□□□ -0.82
LDB3-202ENST00000361373 A0A1W2PPR1 153 aa9.94□□□□□ -0.82
LDB3-202ENST00000361373 FAM110AQ9BQ89 295 aa9.94□□□□□ -0.82
LDB3-202ENST00000361373 LELP1Q5T871 98 aa9.94□□□□□ -0.82
LDB3-202ENST00000361373 RBM3P98179 157 aaKnown RBP9.94□□□□□ -0.82
LDB3-202ENST00000361373 ABCA12Q86UK0 2595 aa9.93□□□□□ -0.82
LDB3-202ENST00000361373 C18orf65Q6ZTR6 163 aa9.93□□□□□ -0.82
LDB3-202ENST00000361373 BBC3Q96PG8 261 aaPredicted RBP9.93□□□□□ -0.82
LDB3-202ENST00000361373 TMEM223A0PJW6 202 aa9.93□□□□□ -0.82
LDB3-202ENST00000361373 NDUFS5O43920 106 aa9.92□□□□□ -0.82
LDB3-202ENST00000361373 RBX1P62877 108 aa9.92□□□□□ -0.82
LDB3-202ENST00000361373 CNFNQ9BYD5 112 aa9.92□□□□□ -0.82
LDB3-202ENST00000361373 HCFC1P51610 2035 aa9.92□□□□□ -0.82
LDB3-202ENST00000361373 IGLV1-51P01701 117 aa9.91□□□□□ -0.82
LDB3-202ENST00000361373 KPRPQ5T749 579 aaPredicted RBP9.91□□□□□ -0.82
LDB3-202ENST00000361373 IGKV2-24A0A0C4DH68 120 aa9.91□□□□□ -0.82
LDB3-202ENST00000361373 MRPS36P82909 103 aaKnown RBP9.91□□□□□ -0.82
LDB3-202ENST00000361373 SYCNQ0VAF6 134 aa9.91□□□□□ -0.82
LDB3-202ENST00000361373 CD164L2Q6UWJ8 174 aa9.91□□□□□ -0.82
LDB3-202ENST00000361373 SPANXB1Q9NS25 103 aaPredicted RBP9.91□□□□□ -0.82
LDB3-202ENST00000361373 POLR2KP53803 58 aaKnown RBP9.9□□□□□ -0.82
LDB3-202ENST00000361373 TAX1BP3O14907 124 aa9.9□□□□□ -0.82
LDB3-202ENST00000361373 ODF3L2Q3SX64 289 aa9.9□□□□□ -0.83
LDB3-202ENST00000361373 PRR9Q5T870 116 aa9.9□□□□□ -0.83
LDB3-202ENST00000361373 C11orf21Q9P2W6 132 aa9.9□□□□□ -0.83
LDB3-202ENST00000361373 NRACQ8N912 160 aa9.89□□□□□ -0.83
LDB3-202ENST00000361373 TLN2Q9Y4G6 2542 aa9.89□□□□□ -0.83
LDB3-202ENST00000361373 IGHV4-30-4P0DP06 118 aa9.89□□□□□ -0.83
LDB3-202ENST00000361373 MUC7Q8TAX7 377 aa9.89□□□□□ -0.83
LDB3-202ENST00000361373 MRPS12O15235 138 aaKnown RBP9.89□□□□□ -0.83
LDB3-202ENST00000361373 TSHBP01222 138 aa9.89□□□□□ -0.83
LDB3-202ENST00000361373 TIMM17BO60830 172 aa9.88□□□□□ -0.83
LDB3-202ENST00000361373 ARHGAP32A7KAX9 2087 aa9.88□□□□□ -0.83
LDB3-202ENST00000361373 Q8N976 141 aa9.88□□□□□ -0.83
LDB3-202ENST00000361373 WFDC10AQ9H1F0 79 aa9.88□□□□□ -0.83
LDB3-202ENST00000361373 CHCHD7Q9BUK0 85 aa9.87□□□□□ -0.83
LDB3-202ENST00000361373 USP9YO00507 2555 aaPredicted RBP9.87□□□□□ -0.83
LDB3-202ENST00000361373 PROK1P58294 105 aa9.87□□□□□ -0.83
LDB3-202ENST00000361373 DOPEY1Q5JWR5 2465 aa9.87□□□□□ -0.83
LDB3-202ENST00000361373 MP68P56378 58 aa9.87□□□□□ -0.83
LDB3-202ENST00000361373 CLEC2BQ92478 149 aa9.87□□□□□ -0.83
LDB3-202ENST00000361373 LINC00308Q8TCZ7 52 aa9.86□□□□□ -0.83
LDB3-202ENST00000361373 YPEL4Q96NS1 127 aa9.86□□□□□ -0.83
LDB3-202ENST00000361373 SMR3AQ99954 134 aa9.86□□□□□ -0.83
LDB3-202ENST00000361373 WDR87Q6ZQQ6 2873 aa9.86□□□□□ -0.83
LDB3-202ENST00000361373 UBE2D3P61077 147 aa9.85□□□□□ -0.83
LDB3-202ENST00000361373 UBE2D2P62837 147 aa9.85□□□□□ -0.83
LDB3-202ENST00000361373 OXLD1Q5BKU9 147 aa9.85□□□□□ -0.83
LDB3-202ENST00000361373 HIGD2AQ9BW72 106 aa9.85□□□□□ -0.83
LDB3-202ENST00000361373 SPTBN4Q9H254 2564 aa9.85□□□□□ -0.83
LDB3-202ENST00000361373 ATG2AQ2TAZ0 1938 aa9.85□□□□□ -0.83
LDB3-202ENST00000361373 A0A1B0GX51 115 aa9.85□□□□□ -0.83
LDB3-202ENST00000361373 SMIM20Q8N5G0 67 aa9.84□□□□□ -0.83
LDB3-202ENST00000361373 WFDC2Q14508 124 aa9.84□□□□□ -0.83
LDB3-202ENST00000361373 CLUHP3Q96NS8 147 aa9.84□□□□□ -0.83
LDB3-202ENST00000361373 UBE2D4Q9Y2X8 147 aa9.84□□□□□ -0.83
LDB3-202ENST00000361373 IGLV4-69A0A075B6H9 119 aa9.84□□□□□ -0.84
LDB3-202ENST00000361373 ATOX1O00244 68 aa9.84□□□□□ -0.84
LDB3-202ENST00000361373 COX8CQ7Z4L0 72 aa9.84□□□□□ -0.84
LDB3-202ENST00000361373 TNRC6BQ9UPQ9 1833 aaKnown RBP9.83□□□□□ -0.84
LDB3-202ENST00000361373 LINC00959A0A1B0GUT2 108 aa9.83□□□□□ -0.84
LDB3-202ENST00000361373 FOXI1Q12951 378 aa9.83□□□□□ -0.84
LDB3-202ENST00000361373 A0A087WZ39 114 aa9.83□□□□□ -0.84
LDB3-202ENST00000361373 C7orf33Q8WU49 177 aa9.83□□□□□ -0.84
LDB3-202ENST00000361373 DSCAML1Q8TD84 2053 aa9.83□□□□□ -0.84
LDB3-202ENST00000361373 FAM19A1Q7Z5A9 133 aa9.82□□□□□ -0.84
LDB3-202ENST00000361373 TP73-AS1Q9UF72 201 aa9.82□□□□□ -0.84
LDB3-202ENST00000361373 COX17Q14061 63 aa9.81□□□□□ -0.84
LDB3-202ENST00000361373 NUPR2A6NF83 97 aa9.8□□□□□ -0.84
LDB3-202ENST00000361373 FN1P02751 2386 aaKnown RBP9.8□□□□□ -0.84
LDB3-202ENST00000361373 A0A0J9YWU9 116 aa9.8□□□□□ -0.84
LDB3-202ENST00000361373 TANC2Q9HCD6 1990 aa9.79□□□□□ -0.84
LDB3-202ENST00000361373 UBE2D1P51668 147 aa9.79□□□□□ -0.84
LDB3-202ENST00000361373 XAGE1AQ9HD64 81 aa9.79□□□□□ -0.84
LDB3-202ENST00000361373 CDC42SE2Q9NRR3 84 aa9.79□□□□□ -0.84
LDB3-202ENST00000361373 LINC00474Q9P2X8 69 aa9.79□□□□□ -0.84
LDB3-202ENST00000361373 IGKV3D-7A0A0C4DH55 119 aa9.79□□□□□ -0.84
LDB3-202ENST00000361373 TRBV30A0A0K0K1B3 111 aa9.79□□□□□ -0.84
LDB3-202ENST00000361373 TCL1BO95988 128 aa9.79□□□□□ -0.84
LDB3-202ENST00000361373 LOC100131303A0A0U1RQF7 123 aa9.78□□□□□ -0.84
LDB3-202ENST00000361373 LOC107984640A0A0U1RRK4 108 aa9.78□□□□□ -0.84
LDB3-202ENST00000361373 M0R378 163 aa9.78□□□□□ -0.84
LDB3-202ENST00000361373 Q8IZM0 81 aa9.78□□□□□ -0.84
LDB3-202ENST00000361373 LRRK2Q5S007 2527 aa9.78□□□□□ -0.84
LDB3-202ENST00000361373 LINC00643Q86TS7 51 aa9.78□□□□□ -0.84
LDB3-202ENST00000361373 ZNF462Q96JM2 2506 aa9.78□□□□□ -0.84
LDB3-202ENST00000361373 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.77□□□□□ -0.84
LDB3-202ENST00000361373 NANOS2P60321 138 aaKnown RBP9.77□□□□□ -0.84
LDB3-202ENST00000361373 PTH2Q96A98 100 aa9.77□□□□□ -0.84
LDB3-202ENST00000361373 TMEM258P61165 79 aa9.77□□□□□ -0.85
LDB3-202ENST00000361373 CPAMD8Q8IZJ3 1885 aa9.77□□□□□ -0.85
LDB3-202ENST00000361373 Q8N2B8 174 aa9.77□□□□□ -0.85
LDB3-202ENST00000361373 ADAMTS20P59510 1910 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms