RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 BAALCQ8WXS3 180 aa12.76□□□□□ -0.37
HLA-DRB1-201ENST00000360004 UBE2D4Q9Y2X8 147 aa12.76□□□□□ -0.37
HLA-DRB1-201ENST00000360004 DNAH2Q9P225 4427 aa12.75□□□□□ -0.37
HLA-DRB1-201ENST00000360004 K7EMI3 77 aa12.75□□□□□ -0.37
HLA-DRB1-201ENST00000360004 G0S2P27469 103 aa12.75□□□□□ -0.37
HLA-DRB1-201ENST00000360004 SPANXA1Q9NS26 97 aa12.75□□□□□ -0.37
HLA-DRB1-201ENST00000360004 CYSLTR1Q9Y271 337 aa12.75□□□□□ -0.37
HLA-DRB1-201ENST00000360004 FRAS1Q86XX4 4008 aa12.75□□□□□ -0.37
HLA-DRB1-201ENST00000360004 TIMM21Q9BVV7 248 aa12.74□□□□□ -0.37
HLA-DRB1-201ENST00000360004 CDC42SE2Q9NRR3 84 aa12.74□□□□□ -0.37
HLA-DRB1-201ENST00000360004 SS18Q15532 418 aa12.73□□□□□ -0.37
HLA-DRB1-201ENST00000360004 YPEL4Q96NS1 127 aa12.73□□□□□ -0.37
HLA-DRB1-201ENST00000360004 CSDC2Q9Y534 153 aaKnown RBP12.73□□□□□ -0.37
HLA-DRB1-201ENST00000360004 RNASE13Q5GAN3 156 aaKnown RBP12.72□□□□□ -0.37
HLA-DRB1-201ENST00000360004 LRCOL1A6NCL2 159 aa12.71□□□□□ -0.37
HLA-DRB1-201ENST00000360004 GAGE12HA6NDE8 117 aa12.71□□□□□ -0.37
HLA-DRB1-201ENST00000360004 C16orf90A8MZG2 172 aa12.71□□□□□ -0.37
HLA-DRB1-201ENST00000360004 C14orf177Q52M58 125 aa12.71□□□□□ -0.37
HLA-DRB1-201ENST00000360004 C2orf66Q6UXQ4 117 aa12.71□□□□□ -0.37
HLA-DRB1-201ENST00000360004 Q6ZUT4 128 aa12.71□□□□□ -0.37
HLA-DRB1-201ENST00000360004 Q8N814 137 aa12.7□□□□□ -0.38
HLA-DRB1-201ENST00000360004 MAPKAPK5-AS1Q8N8E1 139 aa12.7□□□□□ -0.38
HLA-DRB1-201ENST00000360004 CHCHD10Q8WYQ3 142 aaPredicted RBP12.7□□□□□ -0.38
HLA-DRB1-201ENST00000360004 PGPEP1Q9NXJ5 209 aa12.7□□□□□ -0.38
HLA-DRB1-201ENST00000360004 DNAH17Q9UFH2 4485 aa12.7□□□□□ -0.38
HLA-DRB1-201ENST00000360004 TRAV13-1A0A0B4J241 112 aa12.69□□□□□ -0.38
HLA-DRB1-201ENST00000360004 LINC00959A0A1B0GUT2 108 aa12.69□□□□□ -0.38
HLA-DRB1-201ENST00000360004 XCL1P47992 114 aa12.69□□□□□ -0.38
HLA-DRB1-201ENST00000360004 Q6ZN92 141 aa12.69□□□□□ -0.38
HLA-DRB1-201ENST00000360004 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.68□□□□□ -0.38
HLA-DRB1-201ENST00000360004 CCL25O15444 150 aa12.68□□□□□ -0.38
HLA-DRB1-201ENST00000360004 KRTAP10-2P60368 255 aa12.68□□□□□ -0.38
HLA-DRB1-201ENST00000360004 RAB5BP61020 215 aa12.68□□□□□ -0.38
HLA-DRB1-201ENST00000360004 IGLV5-52A0A0A0MRZ9 124 aa12.67□□□□□ -0.38
HLA-DRB1-201ENST00000360004 IFITM10A6NMD0 228 aa12.67□□□□□ -0.38
HLA-DRB1-201ENST00000360004 USP17L23D6RBM5 183 aa12.67□□□□□ -0.38
HLA-DRB1-201ENST00000360004 SCO1O75880 301 aa12.67□□□□□ -0.38
HLA-DRB1-201ENST00000360004 MRPS36P82909 103 aaKnown RBP12.67□□□□□ -0.38
HLA-DRB1-201ENST00000360004 WFDC2Q14508 124 aa12.67□□□□□ -0.38
HLA-DRB1-201ENST00000360004 CDPF1Q6NVV7 123 aa12.67□□□□□ -0.38
HLA-DRB1-201ENST00000360004 C18orf32Q8TCD1 76 aa12.67□□□□□ -0.38
HLA-DRB1-201ENST00000360004 OPRPNQ99935 248 aaPredicted RBP12.67□□□□□ -0.38
HLA-DRB1-201ENST00000360004 C1orf196B1AJZ1 125 aa12.66□□□□□ -0.38
HLA-DRB1-201ENST00000360004 FUSP35637 526 aaKnown RBP eCLIP12.66□□□□□ -0.38
HLA-DRB1-201ENST00000360004 NTN5Q8WTR8 489 aaPredicted RBP12.66□□□□□ -0.38
HLA-DRB1-201ENST00000360004 TMEM141Q96I45 108 aa12.66□□□□□ -0.38
HLA-DRB1-201ENST00000360004 AP5S1Q9NUS5 200 aa12.66□□□□□ -0.38
HLA-DRB1-201ENST00000360004 PYGO1Q9Y3Y4 419 aa12.66□□□□□ -0.38
HLA-DRB1-201ENST00000360004 TRGC2P03986 189 aa12.65□□□□□ -0.38
HLA-DRB1-201ENST00000360004 CFAP161Q6P656 301 aa12.65□□□□□ -0.38
HLA-DRB1-201ENST00000360004 TEX43Q6ZNM6 134 aa12.65□□□□□ -0.38
HLA-DRB1-201ENST00000360004 C2orf88Q9BSF0 95 aa12.65□□□□□ -0.38
HLA-DRB1-201ENST00000360004 LINC01549A6NIU2 74 aa12.64□□□□□ -0.39
HLA-DRB1-201ENST00000360004 LINC00614P0C842 121 aa12.64□□□□□ -0.39
HLA-DRB1-201ENST00000360004 PAPPA-AS1Q5QFB9 102 aa12.64□□□□□ -0.39
HLA-DRB1-201ENST00000360004 KRTAP26-1Q6PEX3 210 aa12.64□□□□□ -0.39
HLA-DRB1-201ENST00000360004 SCGB3A1Q96QR1 104 aa12.64□□□□□ -0.39
HLA-DRB1-201ENST00000360004 VCX2Q9H322 139 aa12.64□□□□□ -0.39
HLA-DRB1-201ENST00000360004 IGLV4-3A0A075B6K6 122 aa12.63□□□□□ -0.39
HLA-DRB1-201ENST00000360004 S100A1P23297 94 aa12.63□□□□□ -0.39
HLA-DRB1-201ENST00000360004 TOMM6Q96B49 74 aa12.63□□□□□ -0.39
HLA-DRB1-201ENST00000360004 FAT2Q9NYQ8 4349 aa12.63□□□□□ -0.39
HLA-DRB1-201ENST00000360004 EPPK1P58107 5090 aaKnown RBP12.62□□□□□ -0.39
HLA-DRB1-201ENST00000360004 COLCA2A8K830 154 aa12.62□□□□□ -0.39
HLA-DRB1-201ENST00000360004 MALP21145 153 aa12.62□□□□□ -0.39
HLA-DRB1-201ENST00000360004 CD164L2Q6UWJ8 174 aa12.62□□□□□ -0.39
HLA-DRB1-201ENST00000360004 BAGE3Q86Y29 109 aa12.62□□□□□ -0.39
HLA-DRB1-201ENST00000360004 hDV102S1A0JD36 115 aa12.61□□□□□ -0.39
HLA-DRB1-201ENST00000360004 LINC01546A6NGU7 62 aa12.61□□□□□ -0.39
HLA-DRB1-201ENST00000360004 HECTD4Q9Y4D8 3996 aa12.61□□□□□ -0.39
HLA-DRB1-201ENST00000360004 ATP6V1G1O75348 118 aa12.6□□□□□ -0.39
HLA-DRB1-201ENST00000360004 NPSP0C0P6 89 aa12.6□□□□□ -0.39
HLA-DRB1-201ENST00000360004 FOXI1Q12951 378 aa12.6□□□□□ -0.39
HLA-DRB1-201ENST00000360004 TIMM17AQ99595 171 aa12.6□□□□□ -0.39
HLA-DRB1-201ENST00000360004 COX7A2LO14548 114 aa12.59□□□□□ -0.39
HLA-DRB1-201ENST00000360004 GCSHP23434 173 aa12.59□□□□□ -0.39
HLA-DRB1-201ENST00000360004 ERASQ7Z444 233 aa12.59□□□□□ -0.39
HLA-DRB1-201ENST00000360004 IGIPA6NJ69 53 aa12.58□□□□□ -0.4
HLA-DRB1-201ENST00000360004 HBDP02042 147 aa12.58□□□□□ -0.4
HLA-DRB1-201ENST00000360004 PRSS1P07477 247 aa12.57□□□□□ -0.4
HLA-DRB1-201ENST00000360004 PMCHL1Q16048 86 aa12.57□□□□□ -0.4
HLA-DRB1-201ENST00000360004 HIGD2BQ4VC39 106 aa12.57□□□□□ -0.4
HLA-DRB1-201ENST00000360004 CHCHD1Q96BP2 118 aaKnown RBP12.57□□□□□ -0.4
HLA-DRB1-201ENST00000360004 IGHV1-58A0A0C4DH39 117 aa12.56□□□□□ -0.4
HLA-DRB1-201ENST00000360004 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.56□□□□□ -0.4
HLA-DRB1-201ENST00000360004 APOMO95445 188 aa12.56□□□□□ -0.4
HLA-DRB1-201ENST00000360004 C5orf38Q86SI9 138 aa12.56□□□□□ -0.4
HLA-DRB1-201ENST00000360004 FAM104AQ969W3 186 aa12.56□□□□□ -0.4
HLA-DRB1-201ENST00000360004 HSBP1O75506 76 aa12.55□□□□□ -0.4
HLA-DRB1-201ENST00000360004 NDUFA6P56556 154 aa12.55□□□□□ -0.4
HLA-DRB1-201ENST00000360004 ZC2HC1BQ5TFG8 222 aa12.55□□□□□ -0.4
HLA-DRB1-201ENST00000360004 URB1-AS1Q96HZ7 61 aa12.55□□□□□ -0.4
HLA-DRB1-201ENST00000360004 PKD1P98161 4303 aa12.55□□□□□ -0.4
HLA-DRB1-201ENST00000360004 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.54□□□□□ -0.4
HLA-DRB1-201ENST00000360004 C15orf56Q8N910 161 aa12.54□□□□□ -0.4
HLA-DRB1-201ENST00000360004 AMELXQ99217 191 aa12.54□□□□□ -0.4
HLA-DRB1-201ENST00000360004 ZNF561-AS1K7EIQ3 104 aa12.53□□□□□ -0.4
HLA-DRB1-201ENST00000360004 UBE2D1P51668 147 aa12.52□□□□□ -0.41
HLA-DRB1-201ENST00000360004 SEC11AP67812 179 aa12.52□□□□□ -0.41
HLA-DRB1-201ENST00000360004 GEMIN7Q9H840 131 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms