RNA–Protein interactions for RNA: ENST00000358918.7

APP-205, Transcript of amyloid beta precursor protein, humanhuman

TSL 5 BASIC

Gene APP, Length 2,366 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-205ENST00000358918 C5orf38Q86SI9 138 aa10.46□□□□□ -0.73
APP-205ENST00000358918 LRRC75A-AS1Q8N1F1 130 aa10.46□□□□□ -0.73
APP-205ENST00000358918 CDKN2A-AS1Q9UH64 79 aa10.46□□□□□ -0.73
APP-205ENST00000358918 PRRC2AP48634 2157 aaKnown RBP10.46□□□□□ -0.73
APP-205ENST00000358918 CELSR2Q9HCU4 2923 aa10.46□□□□□ -0.74
APP-205ENST00000358918 PROK1P58294 105 aa10.46□□□□□ -0.74
APP-205ENST00000358918 AVPP01185 164 aa10.45□□□□□ -0.74
APP-205ENST00000358918 LOC107984640A0A0U1RRK4 108 aa10.45□□□□□ -0.74
APP-205ENST00000358918 B4DSR2 109 aa10.45□□□□□ -0.74
APP-205ENST00000358918 INAFM2P0DMQ5 153 aa10.45□□□□□ -0.74
APP-205ENST00000358918 TIRAPP58753 221 aa10.45□□□□□ -0.74
APP-205ENST00000358918 Q9H8V8 135 aa10.45□□□□□ -0.74
APP-205ENST00000358918 A0A1B0GX51 115 aa10.44□□□□□ -0.74
APP-205ENST00000358918 H3BUX3 64 aa10.44□□□□□ -0.74
APP-205ENST00000358918 LINC00467Q9BRT7 94 aa10.44□□□□□ -0.74
APP-205ENST00000358918 IGLV5-45A0A087WSX0 123 aa10.44□□□□□ -0.74
APP-205ENST00000358918 KLK5Q9Y337 293 aaPredicted RBP10.44□□□□□ -0.74
APP-205ENST00000358918 A0A0U1RRA0 63 aa10.43□□□□□ -0.74
APP-205ENST00000358918 IGLV1-40P01703 118 aa10.43□□□□□ -0.74
APP-205ENST00000358918 BEAN1Q3B7T3 259 aa10.43□□□□□ -0.74
APP-205ENST00000358918 FAM222AQ5U5X8 452 aa10.43□□□□□ -0.74
APP-205ENST00000358918 GAGE2AQ6NT46 116 aa10.43□□□□□ -0.74
APP-205ENST00000358918 MAPK1IP1LQ8NDC0 245 aa10.43□□□□□ -0.74
APP-205ENST00000358918 LRRK2Q5S007 2527 aa10.43□□□□□ -0.74
APP-205ENST00000358918 K7EQG2 157 aa10.43□□□□□ -0.74
APP-205ENST00000358918 Q8N2B8 174 aa10.43□□□□□ -0.74
APP-205ENST00000358918 ZNF625Q96I27 306 aaPredicted RBP10.43□□□□□ -0.74
APP-205ENST00000358918 ATOX1O00244 68 aa10.42□□□□□ -0.74
APP-205ENST00000358918 HTN1P15515 57 aa10.42□□□□□ -0.74
APP-205ENST00000358918 DSCR9P59020 149 aa10.42□□□□□ -0.74
APP-205ENST00000358918 EPG5Q9HCE0 2579 aa10.42□□□□□ -0.74
APP-205ENST00000358918 FBN2P35556 2912 aa10.42□□□□□ -0.74
APP-205ENST00000358918 CRYGAP11844 174 aa10.41□□□□□ -0.74
APP-205ENST00000358918 C5orf47Q569G3 176 aa10.41□□□□□ -0.74
APP-205ENST00000358918 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.41□□□□□ -0.74
APP-205ENST00000358918 KNCNA6PVL3 124 aa10.41□□□□□ -0.74
APP-205ENST00000358918 BLCAPP62952 87 aa10.41□□□□□ -0.74
APP-205ENST00000358918 POLQO75417 2590 aa10.41□□□□□ -0.74
APP-205ENST00000358918 DGAT2L7PQ6IED9 249 aa10.4□□□□□ -0.74
APP-205ENST00000358918 SOSTDC1Q6X4U4 206 aa10.4□□□□□ -0.74
APP-205ENST00000358918 C2orf48Q96LS8 159 aa10.4□□□□□ -0.74
APP-205ENST00000358918 IGLV5-39A0A0G2JS06 123 aa10.4□□□□□ -0.74
APP-205ENST00000358918 A6NDX4 124 aa10.4□□□□□ -0.74
APP-205ENST00000358918 KRTAP10-9P60411 292 aa10.4□□□□□ -0.74
APP-205ENST00000358918 Q9UF83 564 aa10.4□□□□□ -0.74
APP-205ENST00000358918 C22orf24Q9Y442 160 aa10.4□□□□□ -0.74
APP-205ENST00000358918 IGHV3-38A0A0C4DH36 116 aa10.39□□□□□ -0.75
APP-205ENST00000358918 HIST1H4AP62805 103 aaKnown RBP10.39□□□□□ -0.75
APP-205ENST00000358918 Q6ZSN1 163 aa10.39□□□□□ -0.75
APP-205ENST00000358918 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.39□□□□□ -0.75
APP-205ENST00000358918 RNF152Q8N8N0 203 aa10.39□□□□□ -0.75
APP-205ENST00000358918 CSPG4Q6UVK1 2322 aa10.39□□□□□ -0.75
APP-205ENST00000358918 UBR5O95071 2799 aaPredicted RBP10.39□□□□□ -0.75
APP-205ENST00000358918 COX6A2Q02221 97 aa10.39□□□□□ -0.75
APP-205ENST00000358918 FAM19A5Q7Z5A7 132 aaPredicted RBP10.39□□□□□ -0.75
APP-205ENST00000358918 LINC01356Q8N9X3 169 aa10.39□□□□□ -0.75
APP-205ENST00000358918 FAM218AQ96MZ4 157 aa10.39□□□□□ -0.75
APP-205ENST00000358918 ANKRD17O75179 2603 aaKnown RBP10.38□□□□□ -0.75
APP-205ENST00000358918 A0A096LNT2 108 aa10.38□□□□□ -0.75
APP-205ENST00000358918 SMIM9A6NGZ8 99 aa10.38□□□□□ -0.75
APP-205ENST00000358918 RBMY1A1P0DJD3 496 aaKnown RBP10.38□□□□□ -0.75
APP-205ENST00000358918 RBMY1CP0DJD4 496 aa10.38□□□□□ -0.75
APP-205ENST00000358918 MALP21145 153 aa10.38□□□□□ -0.75
APP-205ENST00000358918 RBMY1FQ15415 496 aaKnown RBP10.38□□□□□ -0.75
APP-205ENST00000358918 RPS28P62857 69 aaKnown RBP10.38□□□□□ -0.75
APP-205ENST00000358918 PRIMA1Q86XR5 153 aa10.38□□□□□ -0.75
APP-205ENST00000358918 USP9YO00507 2555 aaPredicted RBP10.37□□□□□ -0.75
APP-205ENST00000358918 CENPEQ02224 2701 aa10.37□□□□□ -0.75
APP-205ENST00000358918 CFHR3Q02985 330 aa10.37□□□□□ -0.75
APP-205ENST00000358918 hADV29S1A0JD25 119 aa10.36□□□□□ -0.75
APP-205ENST00000358918 DNAL4O96015 105 aa10.36□□□□□ -0.75
APP-205ENST00000358918 ZNF415Q09FC8 603 aa10.36□□□□□ -0.75
APP-205ENST00000358918 Q9HAA7 133 aa10.36□□□□□ -0.75
APP-205ENST00000358918 PTPN13Q12923 2485 aa10.36□□□□□ -0.75
APP-205ENST00000358918 IGHV3OR16-12A0A075B7B8 117 aa10.36□□□□□ -0.75
APP-205ENST00000358918 SMIM1B2RUZ4 78 aa10.36□□□□□ -0.75
APP-205ENST00000358918 RPL18AQ02543 176 aaKnown RBP10.36□□□□□ -0.75
APP-205ENST00000358918 DEFB112Q30KQ8 113 aa10.36□□□□□ -0.75
APP-205ENST00000358918 PIK3CD-AS1Q5SR53 167 aa10.36□□□□□ -0.75
APP-205ENST00000358918 LINC00242Q5T6M2 205 aa10.36□□□□□ -0.75
APP-205ENST00000358918 OR13C6PQ8NH95 151 aa10.36□□□□□ -0.75
APP-205ENST00000358918 TRAV13-1A0A0B4J241 112 aa10.35□□□□□ -0.75
APP-205ENST00000358918 HIST2H2BCQ6DN03 193 aa10.35□□□□□ -0.75
APP-205ENST00000358918 HIST2H2BDQ6DRA6 164 aa10.35□□□□□ -0.75
APP-205ENST00000358918 OVOL2Q9BRP0 275 aa10.34□□□□□ -0.75
APP-205ENST00000358918 TRAV13-2A0A0B4J235 113 aa10.34□□□□□ -0.75
APP-205ENST00000358918 IGHV3-53P01767 116 aa10.34□□□□□ -0.75
APP-205ENST00000358918 IGHV4-59P01825 116 aa10.34□□□□□ -0.75
APP-205ENST00000358918 PF4P02776 101 aa10.33□□□□□ -0.76
APP-205ENST00000358918 RPL28P46779 137 aaKnown RBP10.33□□□□□ -0.76
APP-205ENST00000358918 CRPP02741 224 aa10.33□□□□□ -0.76
APP-205ENST00000358918 PSMB8P28062 276 aa10.32□□□□□ -0.76
APP-205ENST00000358918 HOXD3P31249 432 aaPredicted RBP10.32□□□□□ -0.76
APP-205ENST00000358918 ABCA12Q86UK0 2595 aa10.32□□□□□ -0.76
APP-205ENST00000358918 PRM2P04554 102 aa10.32□□□□□ -0.76
APP-205ENST00000358918 SYNJ2BPP57105 145 aa10.32□□□□□ -0.76
APP-205ENST00000358918 TMEM258P61165 79 aa10.32□□□□□ -0.76
APP-205ENST00000358918 FAM19A3Q7Z5A8 133 aa10.32□□□□□ -0.76
APP-205ENST00000358918 DEFB113Q30KQ7 82 aa10.31□□□□□ -0.76
APP-205ENST00000358918 Q6JHZ5 121 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms