RNA–Protein interactions for RNA: ENST00000357977.5

NFIA-201, Transcript of nuclear factor I A, humanhuman

TSL 2 BASIC

Gene NFIA, Length 3,200 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-201ENST00000357977 KRTAP4-12Q9BQ66 201 aa4.9□□□□□ -1.63
NFIA-201ENST00000357977 UBE2D4Q9Y2X8 147 aa4.9□□□□□ -1.63
NFIA-201ENST00000357977 USP17L23D6RBM5 183 aa4.89□□□□□ -1.63
NFIA-201ENST00000357977 HOXD3P31249 432 aaPredicted RBP4.89□□□□□ -1.63
NFIA-201ENST00000357977 HIST2H2BCQ6DN03 193 aa4.89□□□□□ -1.63
NFIA-201ENST00000357977 HIST2H2BDQ6DRA6 164 aa4.89□□□□□ -1.63
NFIA-201ENST00000357977 C11orf71Q6IPW1 123 aa4.89□□□□□ -1.63
NFIA-201ENST00000357977 RNF152Q8N8N0 203 aa4.89□□□□□ -1.63
NFIA-201ENST00000357977 A0A087WVE0 104 aa4.89□□□□□ -1.63
NFIA-201ENST00000357977 Q6JHZ5 121 aa4.89□□□□□ -1.63
NFIA-201ENST00000357977 SOSTDC1Q6X4U4 206 aa4.89□□□□□ -1.63
NFIA-201ENST00000357977 USMG5Q96IX5 58 aa4.89□□□□□ -1.63
NFIA-201ENST00000357977 UPK3BQ9BT76 320 aa4.89□□□□□ -1.63
NFIA-201ENST00000357977 KRTAP9-2Q9BYQ4 174 aa4.89□□□□□ -1.63
NFIA-201ENST00000357977 C14orf132Q9NPU4 83 aa4.89□□□□□ -1.63
NFIA-201ENST00000357977 HTN1P15515 57 aa4.89□□□□□ -1.63
NFIA-201ENST00000357977 ZNF415Q09FC8 603 aa4.89□□□□□ -1.63
NFIA-201ENST00000357977 CHCHD7Q9BUK0 85 aa4.89□□□□□ -1.63
NFIA-201ENST00000357977 Q9UF83 564 aa4.89□□□□□ -1.63
NFIA-201ENST00000357977 OXTP01178 125 aa4.88□□□□□ -1.63
NFIA-201ENST00000357977 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.88□□□□□ -1.63
NFIA-201ENST00000357977 LINC00467Q9BRT7 94 aa4.88□□□□□ -1.63
NFIA-201ENST00000357977 OVOL2Q9BRP0 275 aa4.88□□□□□ -1.63
NFIA-201ENST00000357977 LINC00846Q9NV44 126 aa4.88□□□□□ -1.63
NFIA-201ENST00000357977 TRAV13-2A0A0B4J235 113 aa4.87□□□□□ -1.63
NFIA-201ENST00000357977 KNCNA6PVL3 124 aa4.87□□□□□ -1.63
NFIA-201ENST00000357977 SNRPD3P62318 126 aaKnown RBP4.87□□□□□ -1.63
NFIA-201ENST00000357977 Q5XG85 94 aa4.87□□□□□ -1.63
NFIA-201ENST00000357977 COL12A1Q99715 3063 aa4.87□□□□□ -1.63
NFIA-201ENST00000357977 IGLV5-45A0A087WSX0 123 aa4.87□□□□□ -1.63
NFIA-201ENST00000357977 CRPP02741 224 aa4.87□□□□□ -1.63
NFIA-201ENST00000357977 TNP2Q05952 138 aa4.87□□□□□ -1.63
NFIA-201ENST00000357977 LINC01561Q8N1V8 128 aa4.87□□□□□ -1.63
NFIA-201ENST00000357977 MRAPQ8TCY5 172 aa4.87□□□□□ -1.63
NFIA-201ENST00000357977 IGHV3-38A0A0C4DH36 116 aa4.87□□□□□ -1.63
NFIA-201ENST00000357977 PF4P02776 101 aa4.87□□□□□ -1.63
NFIA-201ENST00000357977 RPL28P46779 137 aaKnown RBP4.87□□□□□ -1.63
NFIA-201ENST00000357977 COX6A2Q02221 97 aa4.87□□□□□ -1.63
NFIA-201ENST00000357977 LY6EQ16553 131 aa4.87□□□□□ -1.63
NFIA-201ENST00000357977 PIK3CD-AS1Q5SR53 167 aa4.87□□□□□ -1.63
NFIA-201ENST00000357977 C10orf105Q8TEF2 133 aa4.87□□□□□ -1.63
NFIA-201ENST00000357977 IGLV5-39A0A0G2JS06 123 aa4.86□□□□□ -1.63
NFIA-201ENST00000357977 H3BUA1 57 aa4.86□□□□□ -1.63
NFIA-201ENST00000357977 CREBBPQ92793 2442 aa4.86□□□□□ -1.63
NFIA-201ENST00000357977 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.86□□□□□ -1.63
NFIA-201ENST00000357977 CDSNQ15517 529 aa4.86□□□□□ -1.63
NFIA-201ENST00000357977 FBXL19-AS1Q494R0 122 aa4.86□□□□□ -1.63
NFIA-201ENST00000357977 BRD3OSQ6XYD6 125 aa4.86□□□□□ -1.63
NFIA-201ENST00000357977 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.86□□□□□ -1.632e-6■■□□□ 13.9
NFIA-201ENST00000357977 PTPRQQ9UMZ3 2332 aa4.86□□□□□ -1.63
NFIA-201ENST00000357977 RIF1Q5UIP0 2472 aaKnown RBP4.86□□□□□ -1.63
NFIA-201ENST00000357977 K7EMT4 169 aa4.85□□□□□ -1.63
NFIA-201ENST00000357977 CCL21O00585 134 aa4.85□□□□□ -1.63
NFIA-201ENST00000357977 Q6ZSN1 163 aa4.85□□□□□ -1.63
NFIA-201ENST00000357977 PRORYQ9H606 182 aa4.85□□□□□ -1.63
NFIA-201ENST00000357977 TTC28Q96AY4 2481 aa4.85□□□□□ -1.63
NFIA-201ENST00000357977 NDUFC2O95298 119 aa4.85□□□□□ -1.63
NFIA-201ENST00000357977 RBMY1A1P0DJD3 496 aaKnown RBP4.85□□□□□ -1.63
NFIA-201ENST00000357977 RBMY1CP0DJD4 496 aa4.85□□□□□ -1.63
NFIA-201ENST00000357977 FHL2Q14192 279 aa4.85□□□□□ -1.63
NFIA-201ENST00000357977 RBMY1FQ15415 496 aaKnown RBP4.85□□□□□ -1.63
NFIA-201ENST00000357977 C9orf129Q5T035 196 aaKnown RBP4.85□□□□□ -1.63
NFIA-201ENST00000357977 IGHV3OR16-12A0A075B7B8 117 aa4.85□□□□□ -1.63
NFIA-201ENST00000357977 SMIM1B2RUZ4 78 aa4.85□□□□□ -1.63
NFIA-201ENST00000357977 LINC00242Q5T6M2 205 aa4.85□□□□□ -1.63
NFIA-201ENST00000357977 BPESC1Q9GZL8 116 aa4.85□□□□□ -1.63
NFIA-201ENST00000357977 A0A087WYN8 130 aa4.84□□□□□ -1.63
NFIA-201ENST00000357977 NDUFC2-KCTD14E9PQ53 114 aa4.84□□□□□ -1.63
NFIA-201ENST00000357977 PRM2P04554 102 aa4.84□□□□□ -1.63
NFIA-201ENST00000357977 LMO4P61968 165 aa4.84□□□□□ -1.63
NFIA-201ENST00000357977 BLCAPP62952 87 aa4.84□□□□□ -1.63
NFIA-201ENST00000357977 ZNF292O60281 2723 aa4.84□□□□□ -1.63
NFIA-201ENST00000357977 KRTAP9-6A0A140TA67 174 aa4.84□□□□□ -1.63
NFIA-201ENST00000357977 H0YGX0 51 aa4.84□□□□□ -1.63
NFIA-201ENST00000357977 K7EQG2 157 aa4.84□□□□□ -1.63
NFIA-201ENST00000357977 GHRHP01286 108 aa4.84□□□□□ -1.63
NFIA-201ENST00000357977 Q8N3U1 123 aa4.84□□□□□ -1.63
NFIA-201ENST00000357977 TMEM243Q9BU79 118 aa4.84□□□□□ -1.63
NFIA-201ENST00000357977 RBMY1BA6NDE4 496 aaKnown RBP4.84□□□□□ -1.64
NFIA-201ENST00000357977 RBMY1EA6NEQ0 496 aaKnown RBP4.84□□□□□ -1.64
NFIA-201ENST00000357977 NCR3O14931 201 aa4.84□□□□□ -1.64
NFIA-201ENST00000357977 RBMY1DP0C7P1 496 aaKnown RBP4.84□□□□□ -1.64
NFIA-201ENST00000357977 S100A7L2Q5SY68 101 aa4.84□□□□□ -1.64
NFIA-201ENST00000357977 DEFB123Q8N688 67 aa4.84□□□□□ -1.64
NFIA-201ENST00000357977 LINC00337Q8N6G1 96 aa4.84□□□□□ -1.64
NFIA-201ENST00000357977 ABCA2Q9BZC7 2435 aa4.83□□□□□ -1.64
NFIA-201ENST00000357977 LECT2O14960 151 aa4.83□□□□□ -1.64
NFIA-201ENST00000357977 IGLV1-40P01703 118 aa4.83□□□□□ -1.64
NFIA-201ENST00000357977 PFN2P35080 140 aa4.83□□□□□ -1.64
NFIA-201ENST00000357977 UCNP55089 124 aa4.83□□□□□ -1.64
NFIA-201ENST00000357977 SMIM11BQ8TCY0 68 aa4.83□□□□□ -1.64
NFIA-201ENST00000357977 OBSCN-AS1Q96MR7 158 aa4.83□□□□□ -1.64
NFIA-201ENST00000357977 SND1-IT1Q9HBX3 110 aa4.83□□□□□ -1.64
NFIA-201ENST00000357977 VPS13CQ709C8 3753 aa4.83□□□□□ -1.64
NFIA-201ENST00000357977 A0A1W2PPR1 153 aa4.83□□□□□ -1.64
NFIA-201ENST00000357977 H3BUX3 64 aa4.83□□□□□ -1.64
NFIA-201ENST00000357977 C20orf197Q8N268 126 aa4.83□□□□□ -1.64
NFIA-201ENST00000357977 CEP295Q9C0D2 2601 aa4.83□□□□□ -1.64
NFIA-201ENST00000357977 CRYBG3Q68DQ2 2970 aa4.82□□□□□ -1.64
NFIA-201ENST00000357977 TRAV23DV6A0A075B6W5 121 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms