RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 SMIM11BQ8TCY0 68 aa9.57□□□□□ -0.88
SMC4-202ENST00000357388 PRYO14603 147 aa9.57□□□□□ -0.88
SMC4-202ENST00000357388 WDR81Q562E7 1941 aa9.56□□□□□ -0.88
SMC4-202ENST00000357388 SYCNQ0VAF6 134 aa9.56□□□□□ -0.88
SMC4-202ENST00000357388 ODF3BA8MYP8 253 aa9.56□□□□□ -0.88
SMC4-202ENST00000357388 MED13LQ71F56 2210 aa9.56□□□□□ -0.88
SMC4-202ENST00000357388 LMO4P61968 165 aa9.56□□□□□ -0.88
SMC4-202ENST00000357388 CD164L2Q6UWJ8 174 aa9.55□□□□□ -0.88
SMC4-202ENST00000357388 FAM19A5Q7Z5A7 132 aaPredicted RBP9.55□□□□□ -0.88
SMC4-202ENST00000357388 INAFM1C9JVW0 142 aa9.55□□□□□ -0.88
SMC4-202ENST00000357388 IGF1P05019 195 aa9.55□□□□□ -0.88
SMC4-202ENST00000357388 ZNF295-AS1Q8N0V1 137 aa9.55□□□□□ -0.88
SMC4-202ENST00000357388 FAM30AQ9NZY2 134 aa9.55□□□□□ -0.88
SMC4-202ENST00000357388 DEFB114Q30KQ6 69 aa9.55□□□□□ -0.88
SMC4-202ENST00000357388 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.55□□□□□ -0.88
SMC4-202ENST00000357388 TNCP24821 2201 aa9.55□□□□□ -0.88
SMC4-202ENST00000357388 RETNQ9HD89 108 aa9.55□□□□□ -0.88
SMC4-202ENST00000357388 TSHBP01222 138 aa9.54□□□□□ -0.88
SMC4-202ENST00000357388 PRR4Q16378 134 aa9.54□□□□□ -0.88
SMC4-202ENST00000357388 CRIP1P50238 77 aa9.54□□□□□ -0.88
SMC4-202ENST00000357388 NCKAP5O14513 1909 aa9.54□□□□□ -0.88
SMC4-202ENST00000357388 DYSFO75923 2080 aa9.54□□□□□ -0.88
SMC4-202ENST00000357388 NTM-AS1Q6ZSK4 140 aa9.54□□□□□ -0.88
SMC4-202ENST00000357388 UBE2D4Q9Y2X8 147 aa9.53□□□□□ -0.88
SMC4-202ENST00000357388 A0A0J9YWU9 116 aa9.53□□□□□ -0.88
SMC4-202ENST00000357388 FSTL3O95633 263 aa9.53□□□□□ -0.88
SMC4-202ENST00000357388 Q8NA96 180 aa9.53□□□□□ -0.88
SMC4-202ENST00000357388 MED13Q9UHV7 2174 aa9.53□□□□□ -0.88
SMC4-202ENST00000357388 A0A096LNI7 61 aa9.52□□□□□ -0.88
SMC4-202ENST00000357388 CSDC2Q9Y534 153 aaKnown RBP9.52□□□□□ -0.89
SMC4-202ENST00000357388 SHANK1Q9Y566 2161 aa9.52□□□□□ -0.89
SMC4-202ENST00000357388 ZNF73O43830 326 aaPredicted RBP9.52□□□□□ -0.89
SMC4-202ENST00000357388 MUC6Q6W4X9 2439 aa9.52□□□□□ -0.89
SMC4-202ENST00000357388 NOTCH2Q04721 2471 aa9.52□□□□□ -0.89
SMC4-202ENST00000357388 XAGE1AQ9HD64 81 aa9.51□□□□□ -0.89
SMC4-202ENST00000357388 PRO0628Q9UI54 55 aa9.51□□□□□ -0.89
SMC4-202ENST00000357388 IGLV4-69A0A075B6H9 119 aa9.51□□□□□ -0.89
SMC4-202ENST00000357388 BRWD1-AS2P59051 145 aa9.51□□□□□ -0.89
SMC4-202ENST00000357388 PCNX2A6NKB5 2137 aa9.5□□□□□ -0.89
SMC4-202ENST00000357388 SOSTDC1Q6X4U4 206 aa9.5□□□□□ -0.89
SMC4-202ENST00000357388 Q8IZM0 81 aa9.5□□□□□ -0.89
SMC4-202ENST00000357388 LOC107984640A0A0U1RRK4 108 aa9.5□□□□□ -0.89
SMC4-202ENST00000357388 IGLV2-11P01706 119 aa9.5□□□□□ -0.89
SMC4-202ENST00000357388 POLR2KP53803 58 aaKnown RBP9.5□□□□□ -0.89
SMC4-202ENST00000357388 Q8N976 141 aa9.5□□□□□ -0.89
SMC4-202ENST00000357388 MRGPRG-AS1Q2M3A8 158 aa9.5□□□□□ -0.89
SMC4-202ENST00000357388 ACACBO00763 2458 aa9.5□□□□□ -0.89
SMC4-202ENST00000357388 UBE2D3P61077 147 aa9.49□□□□□ -0.89
SMC4-202ENST00000357388 DCANP1Q8TF63 244 aa9.49□□□□□ -0.89
SMC4-202ENST00000357388 TRBV7-7A0A0K0K1E9 115 aa9.49□□□□□ -0.89
SMC4-202ENST00000357388 RPL28P46779 137 aaKnown RBP9.49□□□□□ -0.89
SMC4-202ENST00000357388 LY6LH3BQJ8 138 aa9.49□□□□□ -0.89
SMC4-202ENST00000357388 Q6ZS46 218 aa9.49□□□□□ -0.89
SMC4-202ENST00000357388 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.48□□□□□ -0.89
SMC4-202ENST00000357388 Q6ZSV7 163 aa9.48□□□□□ -0.89
SMC4-202ENST00000357388 C22orf34Q6ZV56 151 aa9.48□□□□□ -0.89
SMC4-202ENST00000357388 CNFNQ9BYD5 112 aa9.48□□□□□ -0.89
SMC4-202ENST00000357388 LINC00208Q96KT6 92 aa9.47□□□□□ -0.89
SMC4-202ENST00000357388 LINC00959A0A1B0GUT2 108 aa9.47□□□□□ -0.89
SMC4-202ENST00000357388 LINC00474Q9P2X8 69 aa9.47□□□□□ -0.89
SMC4-202ENST00000357388 MGAMO43451 1857 aa9.46□□□□□ -0.9
SMC4-202ENST00000357388 C19orf84I3L1E1 186 aa9.46□□□□□ -0.9
SMC4-202ENST00000357388 Q8N814 137 aa9.46□□□□□ -0.9
SMC4-202ENST00000357388 OBSL1O75147 1896 aa9.46□□□□□ -0.9
SMC4-202ENST00000357388 ZFHX2Q9C0A1 2572 aaPredicted RBP9.46□□□□□ -0.9
SMC4-202ENST00000357388 TRBV7-6A0A0J9YX20 115 aa9.45□□□□□ -0.9
SMC4-202ENST00000357388 A0A1W2PNU3 283 aaPredicted RBP9.45□□□□□ -0.9
SMC4-202ENST00000357388 LY6G6DO95868 133 aa9.45□□□□□ -0.9
SMC4-202ENST00000357388 RNASE3P12724 160 aaKnown RBP9.45□□□□□ -0.9
SMC4-202ENST00000357388 PLXND1Q9Y4D7 1925 aa9.45□□□□□ -0.9
SMC4-202ENST00000357388 CELA1Q9UNI1 258 aa9.44□□□□□ -0.9
SMC4-202ENST00000357388 A8MZ25 164 aa9.44□□□□□ -0.9
SMC4-202ENST00000357388 LELP1Q5T871 98 aa9.44□□□□□ -0.9
SMC4-202ENST00000357388 IGKV2-28A0A075B6P5 120 aa9.44□□□□□ -0.9
SMC4-202ENST00000357388 IGKV2D-28P01615 120 aa9.44□□□□□ -0.9
SMC4-202ENST00000357388 LY6G6CO95867 125 aa9.44□□□□□ -0.9
SMC4-202ENST00000357388 VPREB1P12018 145 aa9.44□□□□□ -0.9
SMC4-202ENST00000357388 hDV103S1A0JD37 113 aa9.43□□□□□ -0.9
SMC4-202ENST00000357388 KLLNB2CW77 178 aa9.43□□□□□ -0.9
SMC4-202ENST00000357388 C10orf25Q5T742 122 aa9.43□□□□□ -0.9
SMC4-202ENST00000357388 LINC00482Q8N8I6 264 aa9.43□□□□□ -0.9
SMC4-202ENST00000357388 LIMD2Q9BT23 127 aa9.43□□□□□ -0.9
SMC4-202ENST00000357388 IGIPA6NJ69 53 aa9.43□□□□□ -0.9
SMC4-202ENST00000357388 POM121L12Q8N7R1 296 aa9.43□□□□□ -0.9
SMC4-202ENST00000357388 TRBV10-3A0A0K0K1G6 114 aa9.43□□□□□ -0.9
SMC4-202ENST00000357388 MSMPQ1L6U9 139 aa9.43□□□□□ -0.9
SMC4-202ENST00000357388 ZNF843Q8N446 348 aa9.43□□□□□ -0.9
SMC4-202ENST00000357388 TANC1Q9C0D5 1861 aa9.43□□□□□ -0.9
SMC4-202ENST00000357388 Q6ZVQ6 151 aa9.43□□□□□ -0.9
SMC4-202ENST00000357388 RLFQ13129 1914 aa9.42□□□□□ -0.9
SMC4-202ENST00000357388 SPINK6Q6UWN8 80 aa9.42□□□□□ -0.9
SMC4-202ENST00000357388 PSMG3-AS1Q96PY0 264 aa9.42□□□□□ -0.9
SMC4-202ENST00000357388 Q8N3U1 123 aa9.42□□□□□ -0.9
SMC4-202ENST00000357388 HELZP42694 1942 aaKnown RBP9.42□□□□□ -0.9
SMC4-202ENST00000357388 Q6ZPA2 131 aa9.42□□□□□ -0.9
SMC4-202ENST00000357388 A0A087WVE0 104 aa9.41□□□□□ -0.9
SMC4-202ENST00000357388 IGLV2-18A0A075B6J9 118 aa9.41□□□□□ -0.9
SMC4-202ENST00000357388 ESRGQ1W209 222 aa9.41□□□□□ -0.9
SMC4-202ENST00000357388 KPRPQ5T749 579 aaPredicted RBP9.41□□□□□ -0.9
SMC4-202ENST00000357388 BCE1O60756 84 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms