RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 IGLV2-11P01706 119 aa13.07□□□□□ -0.32
COL27A1-201ENST00000356083 NCOR1P1Q9H4R4 102 aa13.07□□□□□ -0.32
COL27A1-201ENST00000356083 DAZAP2Q15038 168 aaPredicted RBP13.07□□□□□ -0.32
COL27A1-201ENST00000356083 SPINK1P00995 79 aa13.06□□□□□ -0.32
COL27A1-201ENST00000356083 E9PLD3 99 aa13.06□□□□□ -0.32
COL27A1-201ENST00000356083 SHISA2Q6UWI4 295 aa13.06□□□□□ -0.32
COL27A1-201ENST00000356083 FAM240AA0A1B0GVK7 77 aa13.06□□□□□ -0.32
COL27A1-201ENST00000356083 PLAC8L1A1L4L8 177 aa13.05□□□□□ -0.32
COL27A1-201ENST00000356083 CPAMD8Q8IZJ3 1885 aa13.05□□□□□ -0.32
COL27A1-201ENST00000356083 NUPR2A6NF83 97 aa13.04□□□□□ -0.32
COL27A1-201ENST00000356083 PLA2G2AP14555 144 aa13.04□□□□□ -0.32
COL27A1-201ENST00000356083 MIAQ16674 131 aa13.04□□□□□ -0.32
COL27A1-201ENST00000356083 CDPF1Q6NVV7 123 aa13.04□□□□□ -0.32
COL27A1-201ENST00000356083 RSPO1Q2MKA7 263 aaPredicted RBP13.03□□□□□ -0.32
COL27A1-201ENST00000356083 JMJD1CQ15652 2540 aa13.03□□□□□ -0.32
COL27A1-201ENST00000356083 SPATA12Q7Z6I5 190 aa13.03□□□□□ -0.32
COL27A1-201ENST00000356083 Q8N976 141 aa13.03□□□□□ -0.32
COL27A1-201ENST00000356083 NDUFC2-KCTD14E9PQ53 114 aa13.03□□□□□ -0.32
COL27A1-201ENST00000356083 E7EUB6 86 aa13.02□□□□□ -0.32
COL27A1-201ENST00000356083 C11orf53Q8IXP5 236 aa13.02□□□□□ -0.32
COL27A1-201ENST00000356083 THSD7BQ9C0I4 1608 aa13.02□□□□□ -0.32
COL27A1-201ENST00000356083 K7EMT4 169 aa13.02□□□□□ -0.32
COL27A1-201ENST00000356083 KPRPQ5T749 579 aaPredicted RBP13.02□□□□□ -0.32
COL27A1-201ENST00000356083 IGLC6P0CF74 106 aa13.02□□□□□ -0.33
COL27A1-201ENST00000356083 NANOS2P60321 138 aaKnown RBP13.02□□□□□ -0.33
COL27A1-201ENST00000356083 A0A0J9YX75 114 aa13.02□□□□□ -0.33
COL27A1-201ENST00000356083 TCL1BO95988 128 aa13.02□□□□□ -0.33
COL27A1-201ENST00000356083 LYRM9A8MSI8 78 aa13.01□□□□□ -0.33
COL27A1-201ENST00000356083 SYCNQ0VAF6 134 aa13.01□□□□□ -0.33
COL27A1-201ENST00000356083 C22orf34Q6ZV56 151 aa13.01□□□□□ -0.33
COL27A1-201ENST00000356083 ZNF706Q9Y5V0 76 aaPredicted RBP13.01□□□□□ -0.33
COL27A1-201ENST00000356083 CRIPAKQ8N1N5 446 aa13□□□□□ -0.33
COL27A1-201ENST00000356083 TRAV10A0A0B4J240 114 aa13□□□□□ -0.33
COL27A1-201ENST00000356083 LY6G6DO95868 133 aa13□□□□□ -0.33
COL27A1-201ENST00000356083 CLUHP3Q96NS8 147 aa13□□□□□ -0.33
COL27A1-201ENST00000356083 BBC3Q96PG8 261 aaPredicted RBP12.98□□□□□ -0.33
COL27A1-201ENST00000356083 PROK1P58294 105 aa12.98□□□□□ -0.33
COL27A1-201ENST00000356083 C6orf99Q4VX62 202 aa12.98□□□□□ -0.33
COL27A1-201ENST00000356083 LINC01548A6NM66 108 aa12.98□□□□□ -0.33
COL27A1-201ENST00000356083 TMEM223A0PJW6 202 aa12.97□□□□□ -0.33
COL27A1-201ENST00000356083 Q8N7P7 452 aa12.97□□□□□ -0.33
COL27A1-201ENST00000356083 WISP2O76076 250 aa12.97□□□□□ -0.33
COL27A1-201ENST00000356083 LINC00322Q6ZN03 302 aaPredicted RBP12.97□□□□□ -0.33
COL27A1-201ENST00000356083 ESRGQ1W209 222 aa12.97□□□□□ -0.33
COL27A1-201ENST00000356083 WFDC10AQ9H1F0 79 aa12.97□□□□□ -0.33
COL27A1-201ENST00000356083 FLG2Q5D862 2391 aaPredicted RBP12.96□□□□□ -0.33
COL27A1-201ENST00000356083 LOC100131303A0A0U1RQF7 123 aa12.96□□□□□ -0.33
COL27A1-201ENST00000356083 C10orf25Q5T742 122 aa12.96□□□□□ -0.33
COL27A1-201ENST00000356083 NUPR1O60356 82 aa12.96□□□□□ -0.34
COL27A1-201ENST00000356083 GOLGB1Q14789 3259 aaKnown RBP12.96□□□□□ -0.34
COL27A1-201ENST00000356083 LINC00643Q86TS7 51 aa12.96□□□□□ -0.34
COL27A1-201ENST00000356083 A0A0J9YXY3 114 aa12.95□□□□□ -0.34
COL27A1-201ENST00000356083 CDKN2A-AS1Q9UH64 79 aa12.95□□□□□ -0.34
COL27A1-201ENST00000356083 Q6Q795 121 aa12.95□□□□□ -0.34
COL27A1-201ENST00000356083 PATE2Q6UY27 113 aa12.95□□□□□ -0.34
COL27A1-201ENST00000356083 TRBV6-8A0A0A6YYG3 113 aa12.95□□□□□ -0.34
COL27A1-201ENST00000356083 H3BT86 120 aa12.95□□□□□ -0.34
COL27A1-201ENST00000356083 OXLD1Q5BKU9 147 aa12.94□□□□□ -0.34
COL27A1-201ENST00000356083 IGLV5-52A0A0A0MRZ9 124 aa12.94□□□□□ -0.34
COL27A1-201ENST00000356083 SMIM9A6NGZ8 99 aa12.94□□□□□ -0.34
COL27A1-201ENST00000356083 PRM2P04554 102 aa12.94□□□□□ -0.34
COL27A1-201ENST00000356083 MIFP14174 115 aa12.94□□□□□ -0.34
COL27A1-201ENST00000356083 DEFB114Q30KQ6 69 aa12.93□□□□□ -0.34
COL27A1-201ENST00000356083 TRBV6-5A0A0K0K1A5 114 aa12.93□□□□□ -0.34
COL27A1-201ENST00000356083 IGLV2-14P01704 120 aa12.93□□□□□ -0.34
COL27A1-201ENST00000356083 C20orf203Q8NBC4 194 aa12.93□□□□□ -0.34
COL27A1-201ENST00000356083 TRBV27A0A0K0K1C4 114 aa12.93□□□□□ -0.34
COL27A1-201ENST00000356083 TMEM89A2RUT3 159 aa12.93□□□□□ -0.34
COL27A1-201ENST00000356083 V9GYY9 64 aa12.92□□□□□ -0.34
COL27A1-201ENST00000356083 CELA1Q9UNI1 258 aa12.91□□□□□ -0.34
COL27A1-201ENST00000356083 GDF5OSQ5U4N7 250 aa12.91□□□□□ -0.34
COL27A1-201ENST00000356083 ZNF843Q8N446 348 aa12.91□□□□□ -0.34
COL27A1-201ENST00000356083 C1orf147Q96MC9 270 aaPredicted RBP12.91□□□□□ -0.34
COL27A1-201ENST00000356083 SETD2Q9BYW2 2564 aaPredicted RBP12.91□□□□□ -0.34
COL27A1-201ENST00000356083 TRBV7-6A0A0J9YX20 115 aa12.91□□□□□ -0.34
COL27A1-201ENST00000356083 PKD1L2Q7Z442 2459 aa12.9□□□□□ -0.34
COL27A1-201ENST00000356083 SPANXB1Q9NS25 103 aaPredicted RBP12.9□□□□□ -0.34
COL27A1-201ENST00000356083 COL4A3Q01955 1670 aa12.9□□□□□ -0.34
COL27A1-201ENST00000356083 FAM167A-AS1Q96KT0 104 aa12.9□□□□□ -0.35
COL27A1-201ENST00000356083 FAM19A3Q7Z5A8 133 aa12.89□□□□□ -0.35
COL27A1-201ENST00000356083 CTRLP40313 264 aa12.89□□□□□ -0.35
COL27A1-201ENST00000356083 BPTFQ12830 3046 aa12.89□□□□□ -0.35
COL27A1-201ENST00000356083 IGHV6-1A0A0B4J1U7 121 aa12.89□□□□□ -0.35
COL27A1-201ENST00000356083 NEXN-AS1Q8NBZ9 246 aa12.89□□□□□ -0.35
COL27A1-201ENST00000356083 ABCA12Q86UK0 2595 aa12.89□□□□□ -0.35
COL27A1-201ENST00000356083 LOC107984640A0A0U1RRK4 108 aa12.88□□□□□ -0.35
COL27A1-201ENST00000356083 Q6YL49 198 aa12.88□□□□□ -0.35
COL27A1-201ENST00000356083 C19orf84I3L1E1 186 aa12.88□□□□□ -0.35
COL27A1-201ENST00000356083 C10orf99Q6UWK7 81 aa12.88□□□□□ -0.35
COL27A1-201ENST00000356083 ZNF462Q96JM2 2506 aa12.87□□□□□ -0.35
COL27A1-201ENST00000356083 LINC01556Q5JQF7 62 aa12.86□□□□□ -0.35
COL27A1-201ENST00000356083 IGLV4-69A0A075B6H9 119 aa12.86□□□□□ -0.35
COL27A1-201ENST00000356083 A8MZ25 164 aa12.86□□□□□ -0.35
COL27A1-201ENST00000356083 TIMM17BO60830 172 aa12.86□□□□□ -0.35
COL27A1-201ENST00000356083 SMR3AQ99954 134 aa12.86□□□□□ -0.35
COL27A1-201ENST00000356083 PRORYQ9H606 182 aa12.86□□□□□ -0.35
COL27A1-201ENST00000356083 C20orf173Q96LM9 149 aa12.86□□□□□ -0.35
COL27A1-201ENST00000356083 CFAP126Q5VTH2 177 aa12.85□□□□□ -0.35
COL27A1-201ENST00000356083 Q6ZQY7 126 aa12.85□□□□□ -0.35
COL27A1-201ENST00000356083 C18orf65Q6ZTR6 163 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms