RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 UBE2WQ96B02 151 aa10.46□□□□□ -0.74
TRIM13-201ENST00000356017 UBE2D4Q9Y2X8 147 aa10.46□□□□□ -0.74
TRIM13-201ENST00000356017 NDUFA6P56556 154 aa10.45□□□□□ -0.74
TRIM13-201ENST00000356017 RMI2Q96E14 147 aa10.45□□□□□ -0.74
TRIM13-201ENST00000356017 Q9HAA7 133 aa10.45□□□□□ -0.74
TRIM13-201ENST00000356017 SPANXA1Q9NS26 97 aa10.45□□□□□ -0.74
TRIM13-201ENST00000356017 PRR34Q9NV39 138 aa10.45□□□□□ -0.74
TRIM13-201ENST00000356017 CYSLTR1Q9Y271 337 aa10.45□□□□□ -0.74
TRIM13-201ENST00000356017 LINC01549A6NIU2 74 aa10.44□□□□□ -0.74
TRIM13-201ENST00000356017 LINC00614P0C842 121 aa10.44□□□□□ -0.74
TRIM13-201ENST00000356017 REG3AQ06141 175 aa10.44□□□□□ -0.74
TRIM13-201ENST00000356017 MIAQ16674 131 aa10.44□□□□□ -0.74
TRIM13-201ENST00000356017 AP5S1Q9NUS5 200 aa10.44□□□□□ -0.74
TRIM13-201ENST00000356017 COX11Q9Y6N1 276 aa10.44□□□□□ -0.74
TRIM13-201ENST00000356017 RPL39P62891 51 aaKnown RBP10.44□□□□□ -0.74
TRIM13-201ENST00000356017 ENHOQ6UWT2 76 aa10.44□□□□□ -0.74
TRIM13-201ENST00000356017 C2orf66Q6UXQ4 117 aa10.44□□□□□ -0.74
TRIM13-201ENST00000356017 TM2D2Q9BX73 214 aa10.44□□□□□ -0.74
TRIM13-201ENST00000356017 ZNF664Q8N3J9 261 aa10.43□□□□□ -0.74
TRIM13-201ENST00000356017 CDC42SE2Q9NRR3 84 aa10.43□□□□□ -0.74
TRIM13-201ENST00000356017 PYGO1Q9Y3Y4 419 aa10.43□□□□□ -0.74
TRIM13-201ENST00000356017 RTL8CO15255 209 aa10.42□□□□□ -0.74
TRIM13-201ENST00000356017 LINC00336Q6ZUF6 198 aa10.42□□□□□ -0.74
TRIM13-201ENST00000356017 TRAV8-4A0A0B4J246 113 aa10.41□□□□□ -0.74
TRIM13-201ENST00000356017 AKR1D1P51857 326 aa10.41□□□□□ -0.74
TRIM13-201ENST00000356017 C1orf43Q9BWL3 253 aa10.41□□□□□ -0.74
TRIM13-201ENST00000356017 IGKV2D-24A0A075B6R9 120 aa10.4□□□□□ -0.74
TRIM13-201ENST00000356017 IFITM10A6NMD0 228 aa10.4□□□□□ -0.74
TRIM13-201ENST00000356017 PSCAO43653 123 aa10.4□□□□□ -0.74
TRIM13-201ENST00000356017 NPSP0C0P6 89 aa10.4□□□□□ -0.74
TRIM13-201ENST00000356017 MRPS36P82909 103 aaKnown RBP10.4□□□□□ -0.74
TRIM13-201ENST00000356017 CLPSL2Q6UWE3 100 aa10.4□□□□□ -0.74
TRIM13-201ENST00000356017 Q6ZRN7 208 aaPredicted RBP10.4□□□□□ -0.74
TRIM13-201ENST00000356017 BAGE3Q86Y29 109 aa10.4□□□□□ -0.74
TRIM13-201ENST00000356017 TOMM6Q96B49 74 aa10.4□□□□□ -0.74
TRIM13-201ENST00000356017 CHCHD1Q96BP2 118 aaKnown RBP10.4□□□□□ -0.74
TRIM13-201ENST00000356017 RYR3Q15413 4870 aa10.39□□□□□ -0.75
TRIM13-201ENST00000356017 URB1-AS1Q96HZ7 61 aa10.39□□□□□ -0.75
TRIM13-201ENST00000356017 PAPPA-AS1Q5QFB9 102 aa10.38□□□□□ -0.75
TRIM13-201ENST00000356017 HIST3H2BBQ8N257 126 aa10.38□□□□□ -0.75
TRIM13-201ENST00000356017 IGKV3OR2-268A0A0C4DH90 116 aa10.37□□□□□ -0.75
TRIM13-201ENST00000356017 IGIPA6NJ69 53 aa10.37□□□□□ -0.75
TRIM13-201ENST00000356017 CCL25O15444 150 aa10.37□□□□□ -0.75
TRIM13-201ENST00000356017 Q6ZN92 141 aa10.37□□□□□ -0.75
TRIM13-201ENST00000356017 Q6ZUT4 128 aa10.37□□□□□ -0.75
TRIM13-201ENST00000356017 ERASQ7Z444 233 aa10.37□□□□□ -0.75
TRIM13-201ENST00000356017 TMEM141Q96I45 108 aa10.37□□□□□ -0.75
TRIM13-201ENST00000356017 TIMM17AQ99595 171 aa10.37□□□□□ -0.75
TRIM13-201ENST00000356017 PRSS29PA6NIE9 313 aa10.36□□□□□ -0.75
TRIM13-201ENST00000356017 SCGB3A1Q96QR1 104 aa10.36□□□□□ -0.75
TRIM13-201ENST00000356017 IGLV10-54A0A075B6I4 117 aa10.36□□□□□ -0.75
TRIM13-201ENST00000356017 LINC00959A0A1B0GUT2 108 aa10.36□□□□□ -0.75
TRIM13-201ENST00000356017 HBDP02042 147 aa10.36□□□□□ -0.75
TRIM13-201ENST00000356017 SS18Q15532 418 aa10.36□□□□□ -0.75
TRIM13-201ENST00000356017 PDZD11Q5EBL8 140 aa10.36□□□□□ -0.75
TRIM13-201ENST00000356017 LINC00518Q8N0U6 118 aa10.36□□□□□ -0.75
TRIM13-201ENST00000356017 IGLV4-3A0A075B6K6 122 aa10.35□□□□□ -0.75
TRIM13-201ENST00000356017 HSBP1O75506 76 aa10.35□□□□□ -0.75
TRIM13-201ENST00000356017 RNASE13Q5GAN3 156 aaKnown RBP10.35□□□□□ -0.75
TRIM13-201ENST00000356017 COA6Q5JTJ3 125 aaKnown RBP10.35□□□□□ -0.75
TRIM13-201ENST00000356017 TEX43Q6ZNM6 134 aa10.35□□□□□ -0.75
TRIM13-201ENST00000356017 FAM104AQ969W3 186 aa10.35□□□□□ -0.75
TRIM13-201ENST00000356017 OPRPNQ99935 248 aaPredicted RBP10.35□□□□□ -0.75
TRIM13-201ENST00000356017 VCX2Q9H322 139 aa10.34□□□□□ -0.75
TRIM13-201ENST00000356017 TNP2Q05952 138 aa10.33□□□□□ -0.76
TRIM13-201ENST00000356017 CHCHD10Q8WYQ3 142 aaPredicted RBP10.33□□□□□ -0.76
TRIM13-201ENST00000356017 C2orf88Q9BSF0 95 aa10.33□□□□□ -0.76
TRIM13-201ENST00000356017 A0A096LNJ9 63 aa10.33□□□□□ -0.76
TRIM13-201ENST00000356017 TRAV13-1A0A0B4J241 112 aa10.33□□□□□ -0.76
TRIM13-201ENST00000356017 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.33□□□□□ -0.76
TRIM13-201ENST00000356017 EREGO14944 169 aa10.33□□□□□ -0.76
TRIM13-201ENST00000356017 SERF1AO75920 110 aa10.33□□□□□ -0.76
TRIM13-201ENST00000356017 PMCHL1Q16048 86 aa10.33□□□□□ -0.76
TRIM13-201ENST00000356017 DNAH2Q9P225 4427 aa10.32□□□□□ -0.76
TRIM13-201ENST00000356017 KRTAP26-1Q6PEX3 210 aa10.32□□□□□ -0.76
TRIM13-201ENST00000356017 AMELXQ99217 191 aa10.32□□□□□ -0.76
TRIM13-201ENST00000356017 NUPR1O60356 82 aa10.31□□□□□ -0.76
TRIM13-201ENST00000356017 ATP5LO75964 103 aa10.31□□□□□ -0.76
TRIM13-201ENST00000356017 LINC00310P59036 64 aa10.31□□□□□ -0.76
TRIM13-201ENST00000356017 MAPKAPK5-AS1Q8N8E1 139 aa10.31□□□□□ -0.76
TRIM13-201ENST00000356017 A0A087WTM6 91 aa10.3□□□□□ -0.76
TRIM13-201ENST00000356017 LRCOL1A6NCL2 159 aa10.3□□□□□ -0.76
TRIM13-201ENST00000356017 GAGE12HA6NDE8 117 aa10.3□□□□□ -0.76
TRIM13-201ENST00000356017 XCL1P47992 114 aa10.3□□□□□ -0.76
TRIM13-201ENST00000356017 CD164L2Q6UWJ8 174 aa10.3□□□□□ -0.76
TRIM13-201ENST00000356017 HIST1H2BLQ99880 126 aa10.3□□□□□ -0.76
TRIM13-201ENST00000356017 FRAS1Q86XX4 4008 aa10.29□□□□□ -0.76
TRIM13-201ENST00000356017 FABP4P15090 132 aa10.29□□□□□ -0.76
TRIM13-201ENST00000356017 BAALCQ8WXS3 180 aa10.29□□□□□ -0.76
TRIM13-201ENST00000356017 OR10D4PQ8NGN7 298 aa10.29□□□□□ -0.76
TRIM13-201ENST00000356017 C12orf57Q99622 126 aa10.29□□□□□ -0.76
TRIM13-201ENST00000356017 S100A2P29034 98 aa10.28□□□□□ -0.76
TRIM13-201ENST00000356017 FOXI1Q12951 378 aa10.28□□□□□ -0.76
TRIM13-201ENST00000356017 LINC00173Q6ZV60 143 aa10.28□□□□□ -0.76
TRIM13-201ENST00000356017 FAM19A2Q8N3H0 131 aa10.28□□□□□ -0.76
TRIM13-201ENST00000356017 UBE2D1P51668 147 aa10.27□□□□□ -0.77
TRIM13-201ENST00000356017 SEC11AP67812 179 aa10.27□□□□□ -0.77
TRIM13-201ENST00000356017 PMVKQ15126 192 aa10.27□□□□□ -0.77
TRIM13-201ENST00000356017 C14orf177Q52M58 125 aa10.27□□□□□ -0.77
TRIM13-201ENST00000356017 SMIM6P0DI80 62 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms