RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 G3V4G9 280 aa18.06■□□□□ 0.48
CLK2-201ENST00000355560 HIGD1BQ9P298 99 aa18.06■□□□□ 0.48
CLK2-201ENST00000355560 CELA1Q9UNI1 258 aa18.06■□□□□ 0.48
CLK2-201ENST00000355560 CMYA5Q8N3K9 4069 aa18.06■□□□□ 0.48
CLK2-201ENST00000355560 ZNF22P17026 224 aaPredicted RBP18.05■□□□□ 0.48
CLK2-201ENST00000355560 TMEM243Q9BU79 118 aa18.05■□□□□ 0.48
CLK2-201ENST00000355560 PRO0255Q9UI72 69 aa18.05■□□□□ 0.48
CLK2-201ENST00000355560 A8MZ25 164 aa18.05■□□□□ 0.48
CLK2-201ENST00000355560 DAD1P61803 113 aa18.05■□□□□ 0.48
CLK2-201ENST00000355560 HSD52Q0P140 79 aa18.05■□□□□ 0.48
CLK2-201ENST00000355560 MYMXA0A1B0GTQ4 84 aa18.04■□□□□ 0.48
CLK2-201ENST00000355560 GYPEP15421 78 aa18.04■□□□□ 0.48
CLK2-201ENST00000355560 UBE2L6O14933 153 aa18.03■□□□□ 0.48
CLK2-201ENST00000355560 CSDC2Q9Y534 153 aaKnown RBP18.03■□□□□ 0.48
CLK2-201ENST00000355560 TMEM223A0PJW6 202 aa18.02■□□□□ 0.47
CLK2-201ENST00000355560 ZNF815PA8K554 130 aa18.01■□□□□ 0.47
CLK2-201ENST00000355560 SPART-AS1P0CW21 52 aa18.01■□□□□ 0.47
CLK2-201ENST00000355560 TRBV6-8A0A0A6YYG3 113 aa18■□□□□ 0.47
CLK2-201ENST00000355560 SMAGPQ0VAQ4 97 aa18■□□□□ 0.47
CLK2-201ENST00000355560 AMMECR1LQ6DCA0 310 aa18■□□□□ 0.47
CLK2-201ENST00000355560 ZNF25P17030 456 aaPredicted RBP17.99■□□□□ 0.47
CLK2-201ENST00000355560 UBE2D1P51668 147 aa17.99■□□□□ 0.47
CLK2-201ENST00000355560 TINCRA0A1B0GVN0 87 aa17.99■□□□□ 0.47
CLK2-201ENST00000355560 TSPEAR-AS2P59090 65 aa17.99■□□□□ 0.47
CLK2-201ENST00000355560 OR5A1Q8NGJ0 315 aa17.99■□□□□ 0.47
CLK2-201ENST00000355560 PAX4O43316 350 aa17.98■□□□□ 0.47
CLK2-201ENST00000355560 ATP6V0E2Q8NHE4 81 aa17.98■□□□□ 0.47
CLK2-201ENST00000355560 RETNQ9HD89 108 aa17.98■□□□□ 0.47
CLK2-201ENST00000355560 ATP5G1P05496 136 aa17.98■□□□□ 0.47
CLK2-201ENST00000355560 IGHV3-64A0A075B6Q5 118 aa17.97■□□□□ 0.47
CLK2-201ENST00000355560 H7C423 109 aa17.97■□□□□ 0.47
CLK2-201ENST00000355560 SAMD5Q5TGI4 173 aa17.96■□□□□ 0.47
CLK2-201ENST00000355560 ORAOV1Q8WV07 137 aa17.96■□□□□ 0.47
CLK2-201ENST00000355560 CDC42SE2Q9NRR3 84 aa17.96■□□□□ 0.47
CLK2-201ENST00000355560 J3QQQ9 107 aa17.96■□□□□ 0.47
CLK2-201ENST00000355560 SEC11AP67812 179 aa17.96■□□□□ 0.47
CLK2-201ENST00000355560 TMEM101Q96IK0 257 aa17.96■□□□□ 0.47
CLK2-201ENST00000355560 ANK2Q01484 3957 aa17.95■□□□□ 0.46
CLK2-201ENST00000355560 A0A0J9YY99 117 aa17.95■□□□□ 0.46
CLK2-201ENST00000355560 GEMIN7Q9H840 131 aaKnown RBP17.95■□□□□ 0.46
CLK2-201ENST00000355560 GAGE6Q13070 117 aa17.95■□□□□ 0.46
CLK2-201ENST00000355560 VSIG2Q96IQ7 327 aa17.95■□□□□ 0.46
CLK2-201ENST00000355560 LEPROTO15243 131 aa17.94■□□□□ 0.46
CLK2-201ENST00000355560 LGALS3P17931 250 aaKnown RBP17.94■□□□□ 0.46
CLK2-201ENST00000355560 SCGB1D4Q6XE38 83 aa17.94■□□□□ 0.46
CLK2-201ENST00000355560 LINC00469Q8N7U9 141 aa17.94■□□□□ 0.46
CLK2-201ENST00000355560 CHCHD5Q9BSY4 110 aa17.94■□□□□ 0.46
CLK2-201ENST00000355560 GCSHP23434 173 aa17.93■□□□□ 0.46
CLK2-201ENST00000355560 A0A096LPF7 62 aa17.93■□□□□ 0.46
CLK2-201ENST00000355560 Q6ZVH6 145 aa17.93■□□□□ 0.46
CLK2-201ENST00000355560 PLEKHB2Q96CS7 222 aa17.92■□□□□ 0.46
CLK2-201ENST00000355560 F5H768 121 aa17.92■□□□□ 0.46
CLK2-201ENST00000355560 TRAV26-1A0A087WT03 109 aa17.91■□□□□ 0.46
CLK2-201ENST00000355560 TRAV13-1A0A0B4J241 112 aa17.91■□□□□ 0.46
CLK2-201ENST00000355560 HTN3P15516 51 aa17.91■□□□□ 0.46
CLK2-201ENST00000355560 TEX48A0A1B0GUV7 120 aa17.9■□□□□ 0.46
CLK2-201ENST00000355560 TIRAPP58753 221 aa17.9■□□□□ 0.46
CLK2-201ENST00000355560 TRAV8-3A0A0A6YYJ7 113 aa17.9■□□□□ 0.46
CLK2-201ENST00000355560 LINC00242Q5T6M2 205 aa17.9■□□□□ 0.46
CLK2-201ENST00000355560 HIST1H4GQ99525 98 aa17.9■□□□□ 0.46
CLK2-201ENST00000355560 NOTCH1P46531 2555 aa17.89■□□□□ 0.46
CLK2-201ENST00000355560 IGHV3-30-3P0DP02 117 aa17.89■□□□□ 0.45
CLK2-201ENST00000355560 CEND1Q8N111 149 aa17.89■□□□□ 0.45
CLK2-201ENST00000355560 CDKN2A-AS1Q9UH64 79 aa17.89■□□□□ 0.45
CLK2-201ENST00000355560 A6NDN8 102 aa17.89■□□□□ 0.45
CLK2-201ENST00000355560 FXYD2P54710 66 aa17.89■□□□□ 0.45
CLK2-201ENST00000355560 TAL2Q16559 108 aa17.89■□□□□ 0.45
CLK2-201ENST00000355560 IGLV5-45A0A087WSX0 123 aa17.88■□□□□ 0.45
CLK2-201ENST00000355560 TAX1BP3O14907 124 aa17.88■□□□□ 0.45
CLK2-201ENST00000355560 SPINK8P0C7L1 97 aa17.88■□□□□ 0.45
CLK2-201ENST00000355560 HERVK_113P63121 156 aa17.88■□□□□ 0.45
CLK2-201ENST00000355560 COX6A2Q02221 97 aa17.88■□□□□ 0.45
CLK2-201ENST00000355560 LURAP1LQ8IV03 231 aa17.88■□□□□ 0.45
CLK2-201ENST00000355560 DNAH3Q8TD57 4116 aa17.87■□□□□ 0.45
CLK2-201ENST00000355560 IGHV1-58A0A0C4DH39 117 aa17.87■□□□□ 0.45
CLK2-201ENST00000355560 IGLV4-60A0A075B6I1 120 aa17.87■□□□□ 0.45
CLK2-201ENST00000355560 K7EP13 123 aa17.87■□□□□ 0.45
CLK2-201ENST00000355560 FAM19A3Q7Z5A8 133 aa17.87■□□□□ 0.45
CLK2-201ENST00000355560 TM2D2Q9BX73 214 aa17.87■□□□□ 0.45
CLK2-201ENST00000355560 COX11Q9Y6N1 276 aa17.87■□□□□ 0.45
CLK2-201ENST00000355560 H3BRM9 83 aa17.85■□□□□ 0.45
CLK2-201ENST00000355560 PTTG1IPP53801 180 aa17.84■□□□□ 0.45
CLK2-201ENST00000355560 C12orf74Q32Q52 190 aa17.84■□□□□ 0.45
CLK2-201ENST00000355560 PRB2P02812 416 aaPredicted RBP17.84■□□□□ 0.45
CLK2-201ENST00000355560 C11orf68Q9H3H3 251 aaKnown RBP17.82■□□□□ 0.44
CLK2-201ENST00000355560 IGKV3OR2-268A0A0C4DH90 116 aa17.81■□□□□ 0.44
CLK2-201ENST00000355560 TMEM262E9PQX1 116 aa17.81■□□□□ 0.44
CLK2-201ENST00000355560 SRSF9Q13242 221 aaKnown RBP eCLIP17.8■□□□□ 0.44
CLK2-201ENST00000355560 MRPL23Q16540 153 aaKnown RBP17.8■□□□□ 0.44
CLK2-201ENST00000355560 C10orf126Q8N4M7 172 aa17.79■□□□□ 0.44
CLK2-201ENST00000355560 MDFIQ99750 246 aa17.79■□□□□ 0.44
CLK2-201ENST00000355560 ICOSQ9Y6W8 199 aa17.79■□□□□ 0.44
CLK2-201ENST00000355560 NBEAL1Q6ZS30 2694 aa17.79■□□□□ 0.44
CLK2-201ENST00000355560 NHP2Q9NX24 153 aaKnown RBP17.78■□□□□ 0.44
CLK2-201ENST00000355560 RBX1P62877 108 aa17.77■□□□□ 0.44
CLK2-201ENST00000355560 NDUFA12Q9UI09 145 aa17.77■□□□□ 0.44
CLK2-201ENST00000355560 TENM3Q9P273 2699 aa17.77■□□□□ 0.43
CLK2-201ENST00000355560 A0A1B0GUV1 79 aa17.77■□□□□ 0.43
CLK2-201ENST00000355560 SPANXB1Q9NS25 103 aaPredicted RBP17.77■□□□□ 0.43
CLK2-201ENST00000355560 A0A0J9YWU9 116 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 1090.1 ms