RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 UBE2D4Q9Y2X8 147 aa4.34□□□□□ -1.72
CLCN3-201ENST00000347613 CSDC2Q9Y534 153 aaKnown RBP4.34□□□□□ -1.72
CLCN3-201ENST00000347613 IGHV3-30-3P0DP02 117 aa4.33□□□□□ -1.72
CLCN3-201ENST00000347613 PSMB2P49721 201 aa4.33□□□□□ -1.72
CLCN3-201ENST00000347613 NTM-AS1Q6ZSK4 140 aa4.33□□□□□ -1.72
CLCN3-201ENST00000347613 LYSTQ99698 3801 aa4.33□□□□□ -1.72
CLCN3-201ENST00000347613 LOC107984156A0A0G2JMH3 177 aa4.33□□□□□ -1.72
CLCN3-201ENST00000347613 DNAJC9-AS1A6NH13 148 aa4.33□□□□□ -1.72
CLCN3-201ENST00000347613 J3QKU1 62 aa4.33□□□□□ -1.72
CLCN3-201ENST00000347613 IGHV3-53P01767 116 aa4.33□□□□□ -1.72
CLCN3-201ENST00000347613 SPINK8P0C7L1 97 aa4.33□□□□□ -1.72
CLCN3-201ENST00000347613 ARL17AQ8IVW1 177 aa4.33□□□□□ -1.72
CLCN3-201ENST00000347613 ZNF418Q8TF45 676 aaPredicted RBP4.33□□□□□ -1.72
CLCN3-201ENST00000347613 FLNBO75369 2602 aaKnown RBP4.33□□□□□ -1.72
CLCN3-201ENST00000347613 A0A0J9YXY3 114 aa4.33□□□□□ -1.72
CLCN3-201ENST00000347613 LOC100131303A0A0U1RQF7 123 aa4.33□□□□□ -1.72
CLCN3-201ENST00000347613 H7C2G1 150 aa4.33□□□□□ -1.72
CLCN3-201ENST00000347613 GAGE13Q4V321 117 aa4.33□□□□□ -1.72
CLCN3-201ENST00000347613 TMEM263Q8WUH6 116 aaKnown RBP4.33□□□□□ -1.72
CLCN3-201ENST00000347613 C4orf3Q8WVX3 66 aa4.33□□□□□ -1.72
CLCN3-201ENST00000347613 LINC01587Q99440 93 aa4.33□□□□□ -1.72
CLCN3-201ENST00000347613 PPP1R17O96001 155 aa4.32□□□□□ -1.72
CLCN3-201ENST00000347613 Q6ZTI0 123 aa4.32□□□□□ -1.72
CLCN3-201ENST00000347613 PLAC8L1A1L4L8 177 aa4.32□□□□□ -1.72
CLCN3-201ENST00000347613 F8W1H4 67 aa4.32□□□□□ -1.72
CLCN3-201ENST00000347613 OXTP01178 125 aa4.32□□□□□ -1.72
CLCN3-201ENST00000347613 SYT8Q8NBV8 401 aa4.32□□□□□ -1.72
CLCN3-201ENST00000347613 M0R2P5 195 aa4.32□□□□□ -1.72
CLCN3-201ENST00000347613 LEPROTO15243 131 aa4.32□□□□□ -1.72
CLCN3-201ENST00000347613 KRTAP10-3P60369 221 aa4.32□□□□□ -1.72
CLCN3-201ENST00000347613 MRPS36P82909 103 aaKnown RBP4.32□□□□□ -1.72
CLCN3-201ENST00000347613 CDKN2A-AS1Q9UH64 79 aa4.32□□□□□ -1.72
CLCN3-201ENST00000347613 RS1O15537 224 aa4.31□□□□□ -1.72
CLCN3-201ENST00000347613 RHOHQ15669 191 aa4.31□□□□□ -1.72
CLCN3-201ENST00000347613 IGHV3-33P01772 117 aa4.31□□□□□ -1.72
CLCN3-201ENST00000347613 IL17DQ8TAD2 202 aa4.31□□□□□ -1.72
CLCN3-201ENST00000347613 NSD1Q96L73 2696 aaPredicted RBP4.31□□□□□ -1.72
CLCN3-201ENST00000347613 TRGV11A0A075B6L2 103 aa4.31□□□□□ -1.72
CLCN3-201ENST00000347613 FBN1P35555 2871 aaKnown RBP4.31□□□□□ -1.72
CLCN3-201ENST00000347613 BEAN1Q3B7T3 259 aa4.31□□□□□ -1.72
CLCN3-201ENST00000347613 GAGE12HA6NDE8 117 aa4.3□□□□□ -1.72
CLCN3-201ENST00000347613 LGALS3P17931 250 aaKnown RBP4.3□□□□□ -1.72
CLCN3-201ENST00000347613 SMAGPQ0VAQ4 97 aa4.3□□□□□ -1.72
CLCN3-201ENST00000347613 ZNF625Q96I27 306 aaPredicted RBP4.3□□□□□ -1.72
CLCN3-201ENST00000347613 EDA2RQ9HAV5 297 aa4.3□□□□□ -1.72
CLCN3-201ENST00000347613 C19orf73Q9NVV2 129 aa4.3□□□□□ -1.72
CLCN3-201ENST00000347613 FOXI1Q12951 378 aa4.3□□□□□ -1.72
CLCN3-201ENST00000347613 PPDPFQ9H3Y8 114 aa4.29□□□□□ -1.72
CLCN3-201ENST00000347613 SS18L2Q9UHA2 77 aa4.29□□□□□ -1.72
CLCN3-201ENST00000347613 PYGO1Q9Y3Y4 419 aa4.29□□□□□ -1.72
CLCN3-201ENST00000347613 ATRQ13535 2644 aa4.29□□□□□ -1.72
CLCN3-201ENST00000347613 TEP1Q99973 2627 aaKnown RBP4.29□□□□□ -1.72
CLCN3-201ENST00000347613 SOSTDC1Q6X4U4 206 aa4.29□□□□□ -1.72
CLCN3-201ENST00000347613 LINC01006Q8NI28 216 aa4.29□□□□□ -1.72
CLCN3-201ENST00000347613 TMEM101Q96IK0 257 aa4.29□□□□□ -1.72
CLCN3-201ENST00000347613 VSIG2Q96IQ7 327 aa4.29□□□□□ -1.72
CLCN3-201ENST00000347613 PRO1854Q9UHT4 67 aa4.29□□□□□ -1.72
CLCN3-201ENST00000347613 TRGV1A0A0A0MS02 117 aa4.29□□□□□ -1.72
CLCN3-201ENST00000347613 CCL24O00175 119 aa4.29□□□□□ -1.72
CLCN3-201ENST00000347613 LINC00242Q5T6M2 205 aa4.29□□□□□ -1.72
CLCN3-201ENST00000347613 DYNLRB2Q8TF09 96 aa4.29□□□□□ -1.72
CLCN3-201ENST00000347613 CSMD3Q7Z407 3707 aa4.28□□□□□ -1.72
CLCN3-201ENST00000347613 IGHV1-58A0A0C4DH39 117 aa4.28□□□□□ -1.72
CLCN3-201ENST00000347613 TRIAP1O43715 76 aa4.28□□□□□ -1.72
CLCN3-201ENST00000347613 SAMD13Q5VXD3 122 aa4.28□□□□□ -1.72
CLCN3-201ENST00000347613 TIMM21Q9BVV7 248 aa4.28□□□□□ -1.72
CLCN3-201ENST00000347613 NOP10Q9NPE3 64 aaKnown RBP4.28□□□□□ -1.72
CLCN3-201ENST00000347613 A8MWV9 139 aa4.28□□□□□ -1.72
CLCN3-201ENST00000347613 RPL35AP18077 110 aaKnown RBP4.28□□□□□ -1.72
CLCN3-201ENST00000347613 HERVK_113P61574 105 aa4.28□□□□□ -1.72
CLCN3-201ENST00000347613 SBSPONQ8IVN8 264 aa4.28□□□□□ -1.72
CLCN3-201ENST00000347613 CSNK1G2-AS1Q8NCQ2 148 aa4.28□□□□□ -1.72
CLCN3-201ENST00000347613 SPATA25Q9BR10 227 aa4.28□□□□□ -1.72
CLCN3-201ENST00000347613 MT-ATP8P03928 68 aa4.28□□□□□ -1.72
CLCN3-201ENST00000347613 ZNF415Q09FC8 603 aa4.28□□□□□ -1.72
CLCN3-201ENST00000347613 PAPPA-AS1Q5QFB9 102 aa4.28□□□□□ -1.72
CLCN3-201ENST00000347613 ANKRD29Q8N6D5 301 aa4.28□□□□□ -1.72
CLCN3-201ENST00000347613 XGP55808 180 aa4.27□□□□□ -1.73
CLCN3-201ENST00000347613 CLEC2BQ92478 149 aa4.27□□□□□ -1.73
CLCN3-201ENST00000347613 C1QTNF4Q9BXJ3 329 aa4.27□□□□□ -1.73
CLCN3-201ENST00000347613 PEMTQ9UBM1 199 aa4.27□□□□□ -1.73
CLCN3-201ENST00000347613 NDUFA12Q9UI09 145 aa4.27□□□□□ -1.73
CLCN3-201ENST00000347613 TINCRA0A1B0GVN0 87 aa4.27□□□□□ -1.73
CLCN3-201ENST00000347613 GAGE12JA6NER3 117 aa4.27□□□□□ -1.73
CLCN3-201ENST00000347613 PRSS2P07478 247 aa4.27□□□□□ -1.73
CLCN3-201ENST00000347613 GAGE4Q13068 117 aa4.27□□□□□ -1.73
CLCN3-201ENST00000347613 GAGE5Q13069 117 aa4.27□□□□□ -1.73
CLCN3-201ENST00000347613 SIGMAR1Q99720 223 aa4.27□□□□□ -1.73
CLCN3-201ENST00000347613 HIVEP2P31629 2446 aa4.27□□□□□ -1.73
CLCN3-201ENST00000347613 INSP01308 110 aa4.27□□□□□ -1.73
CLCN3-201ENST00000347613 TRAV13-1A0A0B4J241 112 aa4.26□□□□□ -1.73
CLCN3-201ENST00000347613 A0A1B0GV72 72 aa4.26□□□□□ -1.73
CLCN3-201ENST00000347613 F5H768 121 aa4.26□□□□□ -1.73
CLCN3-201ENST00000347613 SCGB1A1P11684 91 aa4.26□□□□□ -1.73
CLCN3-201ENST00000347613 STHQ8IWL8 128 aa4.26□□□□□ -1.73
CLCN3-201ENST00000347613 KIR2DL5BQ8NHK3 375 aa4.26□□□□□ -1.73
CLCN3-201ENST00000347613 TENM3Q9P273 2699 aa4.26□□□□□ -1.73
CLCN3-201ENST00000347613 TEX49A0A1B0GTD5 131 aa4.26□□□□□ -1.73
CLCN3-201ENST00000347613 C9JAW5 83 aa4.26□□□□□ -1.73
CLCN3-201ENST00000347613 GAGE7O76087 117 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms