RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 PRIMA1Q86XR5 153 aa11.15□□□□□ -0.62
LMNA-201ENST00000347559 USMG5Q96IX5 58 aa11.15□□□□□ -0.62
LMNA-201ENST00000347559 C14orf132Q9NPU4 83 aa11.15□□□□□ -0.63
LMNA-201ENST00000347559 SNRPD3P62318 126 aaKnown RBP11.14□□□□□ -0.63
LMNA-201ENST00000347559 BEAN1Q3B7T3 259 aa11.14□□□□□ -0.63
LMNA-201ENST00000347559 C11orf71Q6IPW1 123 aa11.14□□□□□ -0.63
LMNA-201ENST00000347559 MALP21145 153 aa11.13□□□□□ -0.63
LMNA-201ENST00000347559 ATRXP46100 2492 aa11.13□□□□□ -0.63
LMNA-201ENST00000347559 BPESC1Q9GZL8 116 aa11.13□□□□□ -0.63
LMNA-201ENST00000347559 RPL18AQ02543 176 aaKnown RBP11.13□□□□□ -0.63
LMNA-201ENST00000347559 C9orf129Q5T035 196 aaKnown RBP11.12□□□□□ -0.63
LMNA-201ENST00000347559 RNF152Q8N8N0 203 aa11.11□□□□□ -0.63
LMNA-201ENST00000347559 DPH3Q96FX2 82 aa11.11□□□□□ -0.63
LMNA-201ENST00000347559 CSPG4Q6UVK1 2322 aa11.11□□□□□ -0.63
LMNA-201ENST00000347559 C4orf26Q17RF5 130 aa11.1□□□□□ -0.63
LMNA-201ENST00000347559 H3BUX3 64 aa11.1□□□□□ -0.63
LMNA-201ENST00000347559 RBMY1A1P0DJD3 496 aaKnown RBP11.1□□□□□ -0.63
LMNA-201ENST00000347559 RBMY1CP0DJD4 496 aa11.1□□□□□ -0.63
LMNA-201ENST00000347559 RPS28P62857 69 aaKnown RBP11.1□□□□□ -0.63
LMNA-201ENST00000347559 RBMY1FQ15415 496 aaKnown RBP11.1□□□□□ -0.63
LMNA-201ENST00000347559 HIST1H4AP62805 103 aaKnown RBP11.09□□□□□ -0.63
LMNA-201ENST00000347559 IGHV3OR16-12A0A075B7B8 117 aa11.09□□□□□ -0.63
LMNA-201ENST00000347559 LINC00846Q9NV44 126 aa11.09□□□□□ -0.63
LMNA-201ENST00000347559 LMO4P61968 165 aa11.08□□□□□ -0.64
LMNA-201ENST00000347559 HRCT1Q6UXD1 115 aa11.08□□□□□ -0.64
LMNA-201ENST00000347559 A0A1W2PPR1 153 aa11.08□□□□□ -0.64
LMNA-201ENST00000347559 OXTP01178 125 aa11.08□□□□□ -0.64
LMNA-201ENST00000347559 LINC00242Q5T6M2 205 aa11.08□□□□□ -0.64
LMNA-201ENST00000347559 SERP2Q8N6R1 65 aa11.08□□□□□ -0.64
LMNA-201ENST00000347559 COPS9Q8WXC6 57 aa11.08□□□□□ -0.64
LMNA-201ENST00000347559 FAM222AQ5U5X8 452 aa11.07□□□□□ -0.64
LMNA-201ENST00000347559 HIST2H2BCQ6DN03 193 aa11.07□□□□□ -0.64
LMNA-201ENST00000347559 HIST2H2BDQ6DRA6 164 aa11.07□□□□□ -0.64
LMNA-201ENST00000347559 CRPP02741 224 aa11.07□□□□□ -0.64
LMNA-201ENST00000347559 A0A087WYN8 130 aa11.07□□□□□ -0.64
LMNA-201ENST00000347559 TMEM258P61165 79 aa11.07□□□□□ -0.64
LMNA-201ENST00000347559 SPG11Q96JI7 2443 aa11.06□□□□□ -0.64
LMNA-201ENST00000347559 SMIM1B2RUZ4 78 aa11.06□□□□□ -0.64
LMNA-201ENST00000347559 USP17L23D6RBM5 183 aa11.06□□□□□ -0.64
LMNA-201ENST00000347559 C10orf99Q6UWK7 81 aa11.06□□□□□ -0.64
LMNA-201ENST00000347559 K7EQG2 157 aa11.05□□□□□ -0.64
LMNA-201ENST00000347559 PIMREGQ9BSJ6 248 aa11.05□□□□□ -0.64
LMNA-201ENST00000347559 TRAV25A0A0B4J276 109 aa11.05□□□□□ -0.64
LMNA-201ENST00000347559 ZNF292O60281 2723 aa11.05□□□□□ -0.64
LMNA-201ENST00000347559 IGLV5-39A0A0G2JS06 123 aa11.04□□□□□ -0.64
LMNA-201ENST00000347559 K7EMT4 169 aa11.04□□□□□ -0.64
LMNA-201ENST00000347559 NCR3O14931 201 aa11.04□□□□□ -0.64
LMNA-201ENST00000347559 IGLV5-45A0A087WSX0 123 aa11.04□□□□□ -0.64
LMNA-201ENST00000347559 IGHV4-38-2P0DP08 117 aa11.04□□□□□ -0.64
LMNA-201ENST00000347559 LINC01561Q8N1V8 128 aa11.04□□□□□ -0.64
LMNA-201ENST00000347559 SLPIP03973 132 aa11.04□□□□□ -0.64
LMNA-201ENST00000347559 H3BUA1 57 aa11.03□□□□□ -0.64
LMNA-201ENST00000347559 LINC00337Q8N6G1 96 aa11.03□□□□□ -0.64
LMNA-201ENST00000347559 C10orf105Q8TEF2 133 aa11.03□□□□□ -0.64
LMNA-201ENST00000347559 TOMM7Q9P0U1 55 aa11.03□□□□□ -0.64
LMNA-201ENST00000347559 WFDC9Q8NEX5 89 aa11.02□□□□□ -0.64
LMNA-201ENST00000347559 FBXL19-AS1Q494R0 122 aa11.02□□□□□ -0.65
LMNA-201ENST00000347559 UPK3BQ9BT76 320 aa11.02□□□□□ -0.65
LMNA-201ENST00000347559 TRAV13-2A0A0B4J235 113 aa11.02□□□□□ -0.65
LMNA-201ENST00000347559 LECT2O14960 151 aa11.02□□□□□ -0.65
LMNA-201ENST00000347559 CFHR3Q02985 330 aa11.02□□□□□ -0.65
LMNA-201ENST00000347559 Q6JHZ5 121 aa11.02□□□□□ -0.65
LMNA-201ENST00000347559 MIR7-3HGQ8N6C7 128 aa11.02□□□□□ -0.65
LMNA-201ENST00000347559 ABCA2Q9BZC7 2435 aa11.01□□□□□ -0.65
LMNA-201ENST00000347559 HILS1P60008 231 aa11.01□□□□□ -0.65
LMNA-201ENST00000347559 SMIM11BQ8TCY0 68 aa11.01□□□□□ -0.65
LMNA-201ENST00000347559 SND1-IT1Q9HBX3 110 aa11.01□□□□□ -0.65
LMNA-201ENST00000347559 F5H768 121 aa11.01□□□□□ -0.65
LMNA-201ENST00000347559 IGLV1-40P01703 118 aa11.01□□□□□ -0.65
LMNA-201ENST00000347559 RPL28P46779 137 aaKnown RBP11.01□□□□□ -0.65
LMNA-201ENST00000347559 IGKV3OR2-268A0A0C4DH90 116 aa11□□□□□ -0.65
LMNA-201ENST00000347559 DEFB131AP59861 70 aa11□□□□□ -0.65
LMNA-201ENST00000347559 ADORA2A-AS1P86434 159 aa11□□□□□ -0.65
LMNA-201ENST00000347559 CRYBG3Q68DQ2 2970 aa11□□□□□ -0.65
LMNA-201ENST00000347559 LINC00158P58513 81 aa10.99□□□□□ -0.65
LMNA-201ENST00000347559 ZNF415Q09FC8 603 aa10.99□□□□□ -0.65
LMNA-201ENST00000347559 FHL2Q14192 279 aa10.98□□□□□ -0.65
LMNA-201ENST00000347559 TRAV23DV6A0A075B6W5 121 aa10.98□□□□□ -0.65
LMNA-201ENST00000347559 IGHV3-53P01767 116 aa10.98□□□□□ -0.65
LMNA-201ENST00000347559 IGKV2-28A0A075B6P5 120 aa10.98□□□□□ -0.65
LMNA-201ENST00000347559 WIPF1O43516 503 aa10.98□□□□□ -0.65
LMNA-201ENST00000347559 IGKV2D-28P01615 120 aa10.98□□□□□ -0.65
LMNA-201ENST00000347559 CUBNO60494 3623 aa10.97□□□□□ -0.65
LMNA-201ENST00000347559 RPL36AP83881 106 aaKnown RBP10.97□□□□□ -0.65
LMNA-201ENST00000347559 RPL36ALQ969Q0 106 aaKnown RBP10.97□□□□□ -0.65
LMNA-201ENST00000347559 A6NDX4 124 aa10.97□□□□□ -0.65
LMNA-201ENST00000347559 Q96MF0 132 aa10.97□□□□□ -0.65
LMNA-201ENST00000347559 Q5XG85 94 aa10.96□□□□□ -0.65
LMNA-201ENST00000347559 GHRHP01286 108 aa10.96□□□□□ -0.66
LMNA-201ENST00000347559 PFN2P35080 140 aa10.95□□□□□ -0.66
LMNA-201ENST00000347559 PRORYQ9H606 182 aa10.95□□□□□ -0.66
LMNA-201ENST00000347559 PF4P02776 101 aa10.95□□□□□ -0.66
LMNA-201ENST00000347559 OVOL2Q9BRP0 275 aa10.95□□□□□ -0.66
LMNA-201ENST00000347559 IGF2RP11717 2491 aa10.94□□□□□ -0.66
LMNA-201ENST00000347559 RBMY1BA6NDE4 496 aaKnown RBP10.94□□□□□ -0.66
LMNA-201ENST00000347559 RBMY1EA6NEQ0 496 aaKnown RBP10.94□□□□□ -0.66
LMNA-201ENST00000347559 RBMY1DP0C7P1 496 aaKnown RBP10.94□□□□□ -0.66
LMNA-201ENST00000347559 C20orf197Q8N268 126 aa10.94□□□□□ -0.66
LMNA-201ENST00000347559 HIVEP3Q5T1R4 2406 aa10.94□□□□□ -0.66
LMNA-201ENST00000347559 PAX4O43316 350 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms