RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 POLR2KP53803 58 aaKnown RBP9.67□□□□□ -0.86
CASC4-202ENST00000345795 ERG28Q9UKR5 140 aa9.67□□□□□ -0.86
CASC4-202ENST00000345795 LINC00694P0DN24 101 aa9.67□□□□□ -0.86
CASC4-202ENST00000345795 CIRBPQ14011 172 aaKnown RBP9.67□□□□□ -0.86
CASC4-202ENST00000345795 ZNF469Q96JG9 3925 aaPredicted RBP9.67□□□□□ -0.86
CASC4-202ENST00000345795 C1orf158Q8N1D5 194 aa9.67□□□□□ -0.86
CASC4-202ENST00000345795 RHODO00212 210 aa9.66□□□□□ -0.86
CASC4-202ENST00000345795 DAD1P61803 113 aa9.66□□□□□ -0.86
CASC4-202ENST00000345795 TRBV7-3A0A075B6L6 115 aa9.66□□□□□ -0.86
CASC4-202ENST00000345795 ANGP03950 147 aaKnown RBP9.66□□□□□ -0.86
CASC4-202ENST00000345795 IGHV3-30-3P0DP02 117 aa9.66□□□□□ -0.86
CASC4-202ENST00000345795 IGLL5B9A064 214 aa9.66□□□□□ -0.86
CASC4-202ENST00000345795 J3QR89 54 aa9.66□□□□□ -0.86
CASC4-202ENST00000345795 C6orf226Q5I0X4 101 aa9.66□□□□□ -0.86
CASC4-202ENST00000345795 LRRC75A-AS1Q8N1F1 130 aa9.66□□□□□ -0.86
CASC4-202ENST00000345795 C9orf85Q96MD7 179 aa9.66□□□□□ -0.86
CASC4-202ENST00000345795 TMEM243Q9BU79 118 aa9.66□□□□□ -0.86
CASC4-202ENST00000345795 SPATA3Q8NHX4 192 aa9.65□□□□□ -0.86
CASC4-202ENST00000345795 PAX4O43316 350 aa9.65□□□□□ -0.86
CASC4-202ENST00000345795 C1QTNF4Q9BXJ3 329 aa9.65□□□□□ -0.86
CASC4-202ENST00000345795 MALP21145 153 aa9.65□□□□□ -0.87
CASC4-202ENST00000345795 LINC00315P59091 139 aa9.65□□□□□ -0.87
CASC4-202ENST00000345795 MORN3Q6PF18 240 aaPredicted RBP9.65□□□□□ -0.87
CASC4-202ENST00000345795 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.65□□□□□ -0.87
CASC4-202ENST00000345795 CR1P17927 2039 aa9.64□□□□□ -0.87
CASC4-202ENST00000345795 E9PLD3 99 aa9.64□□□□□ -0.87
CASC4-202ENST00000345795 K7EP34 96 aa9.64□□□□□ -0.87
CASC4-202ENST00000345795 K7EQD1 137 aa9.64□□□□□ -0.87
CASC4-202ENST00000345795 FAM222AQ5U5X8 452 aa9.64□□□□□ -0.87
CASC4-202ENST00000345795 KMT2BQ9UMN6 2715 aaPredicted RBP9.64□□□□□ -0.87
CASC4-202ENST00000345795 TRBV7-9A0A0J9YWB2 115 aa9.63□□□□□ -0.87
CASC4-202ENST00000345795 TMEM238C9JI98 176 aa9.63□□□□□ -0.87
CASC4-202ENST00000345795 ZNF22P17026 224 aaPredicted RBP9.63□□□□□ -0.87
CASC4-202ENST00000345795 COX8CQ7Z4L0 72 aa9.63□□□□□ -0.87
CASC4-202ENST00000345795 TRBV27A0A0K0K1C4 114 aa9.63□□□□□ -0.87
CASC4-202ENST00000345795 KIF25-AS1Q9Y6Z4 181 aa9.63□□□□□ -0.87
CASC4-202ENST00000345795 RETNQ9HD89 108 aa9.62□□□□□ -0.87
CASC4-202ENST00000345795 IGHV4-4A0A075B6R2 117 aa9.62□□□□□ -0.87
CASC4-202ENST00000345795 IGIPA6NJ69 53 aa9.62□□□□□ -0.87
CASC4-202ENST00000345795 IGHV3-30P01768 117 aa9.62□□□□□ -0.87
CASC4-202ENST00000345795 IGHV3-33P01772 117 aa9.62□□□□□ -0.87
CASC4-202ENST00000345795 IGHV3-30-5P0DP03 117 aa9.62□□□□□ -0.87
CASC4-202ENST00000345795 KRTAP1-3Q8IUG1 177 aa9.61□□□□□ -0.87
CASC4-202ENST00000345795 COX6CP09669 75 aa9.61□□□□□ -0.87
CASC4-202ENST00000345795 HILS1P60008 231 aa9.61□□□□□ -0.87
CASC4-202ENST00000345795 TMEM263Q8WUH6 116 aaKnown RBP9.61□□□□□ -0.87
CASC4-202ENST00000345795 VSIG2Q96IQ7 327 aa9.61□□□□□ -0.87
CASC4-202ENST00000345795 RS1O15537 224 aa9.6□□□□□ -0.87
CASC4-202ENST00000345795 RHOHQ15669 191 aa9.6□□□□□ -0.87
CASC4-202ENST00000345795 PIK3CD-AS1Q5SR53 167 aa9.6□□□□□ -0.87
CASC4-202ENST00000345795 POM121L12Q8N7R1 296 aa9.6□□□□□ -0.87
CASC4-202ENST00000345795 TRAV26-1A0A087WT03 109 aa9.6□□□□□ -0.87
CASC4-202ENST00000345795 CLEC2BQ92478 149 aa9.6□□□□□ -0.87
CASC4-202ENST00000345795 IGLV4-69A0A075B6H9 119 aa9.6□□□□□ -0.87
CASC4-202ENST00000345795 TIMM17AQ99595 171 aa9.6□□□□□ -0.87
CASC4-202ENST00000345795 Q9HAA7 133 aa9.6□□□□□ -0.87
CASC4-202ENST00000345795 PRO1854Q9UHT4 67 aa9.6□□□□□ -0.87
CASC4-202ENST00000345795 TRAV12-1A0A0B4J245 112 aa9.59□□□□□ -0.87
CASC4-202ENST00000345795 INSL3P51460 131 aa9.59□□□□□ -0.87
CASC4-202ENST00000345795 MED14OSP0DP75 135 aa9.59□□□□□ -0.87
CASC4-202ENST00000345795 RPL13AP40429 203 aaKnown RBP9.59□□□□□ -0.87
CASC4-202ENST00000345795 NFE4Q86UQ8 179 aa9.59□□□□□ -0.87
CASC4-202ENST00000345795 COX6A2Q02221 97 aa9.58□□□□□ -0.88
CASC4-202ENST00000345795 CKS1BP61024 79 aa9.58□□□□□ -0.88
CASC4-202ENST00000345795 MRPL52Q86TS9 123 aaKnown RBP9.58□□□□□ -0.88
CASC4-202ENST00000345795 LYRM7Q5U5X0 104 aa9.58□□□□□ -0.88
CASC4-202ENST00000345795 Q8N3U1 123 aa9.57□□□□□ -0.88
CASC4-202ENST00000345795 ATP6V0E2Q8NHE4 81 aa9.57□□□□□ -0.88
CASC4-202ENST00000345795 UBE2WQ96B02 151 aa9.57□□□□□ -0.88
CASC4-202ENST00000345795 SIVA1O15304 175 aa9.56□□□□□ -0.88
CASC4-202ENST00000345795 FAM19A4Q96LR4 140 aa9.56□□□□□ -0.88
CASC4-202ENST00000345795 C16orf74Q96GX8 76 aa9.56□□□□□ -0.88
CASC4-202ENST00000345795 A0A0J9YXY3 114 aa9.55□□□□□ -0.88
CASC4-202ENST00000345795 TSPAN13O95857 204 aa9.55□□□□□ -0.88
CASC4-202ENST00000345795 CFAP161Q6P656 301 aa9.55□□□□□ -0.88
CASC4-202ENST00000345795 KLK12Q9UKR0 248 aa9.55□□□□□ -0.88
CASC4-202ENST00000345795 C2orf82Q6UX34 121 aa9.55□□□□□ -0.88
CASC4-202ENST00000345795 IGLV4-60A0A075B6I1 120 aa9.54□□□□□ -0.88
CASC4-202ENST00000345795 LEPROTO15243 131 aa9.54□□□□□ -0.88
CASC4-202ENST00000345795 BRI3O95415 125 aa9.54□□□□□ -0.88
CASC4-202ENST00000345795 LINC00269Q8N2A0 174 aa9.54□□□□□ -0.88
CASC4-202ENST00000345795 C10orf126Q8N4M7 172 aa9.54□□□□□ -0.88
CASC4-202ENST00000345795 FSHBP01225 129 aa9.54□□□□□ -0.88
CASC4-202ENST00000345795 UBE2D4Q9Y2X8 147 aa9.54□□□□□ -0.88
CASC4-202ENST00000345795 TMEM86BQ8N661 226 aa9.53□□□□□ -0.88
CASC4-202ENST00000345795 CFC1BP0CG36 223 aa9.53□□□□□ -0.88
CASC4-202ENST00000345795 CFC1P0CG37 223 aa9.53□□□□□ -0.88
CASC4-202ENST00000345795 ADAMTSL4-AS1Q5T5F5 129 aa9.53□□□□□ -0.88
CASC4-202ENST00000345795 ZMAT4Q9H898 229 aa9.53□□□□□ -0.88
CASC4-202ENST00000345795 NDUFA11Q86Y39 141 aa9.53□□□□□ -0.88
CASC4-202ENST00000345795 NTN5Q8WTR8 489 aaPredicted RBP9.53□□□□□ -0.88
CASC4-202ENST00000345795 TMEM223A0PJW6 202 aa9.52□□□□□ -0.88
CASC4-202ENST00000345795 TCL1BO95988 128 aa9.52□□□□□ -0.88
CASC4-202ENST00000345795 IGLV1-51P01701 117 aa9.52□□□□□ -0.88
CASC4-202ENST00000345795 C11orf72Q8NBR9 251 aa9.52□□□□□ -0.88
CASC4-202ENST00000345795 ODF3Q96PU9 254 aa9.52□□□□□ -0.88
CASC4-202ENST00000345795 DNAL4O96015 105 aa9.52□□□□□ -0.89
CASC4-202ENST00000345795 SPANXA1Q9NS26 97 aa9.52□□□□□ -0.89
CASC4-202ENST00000345795 IGHV1-58A0A0C4DH39 117 aa9.51□□□□□ -0.89
CASC4-202ENST00000345795 CRPP02741 224 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms