RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 Q6JHZ5 121 aa12.97□□□□□ -0.33
SPAST-202ENST00000345662 A0A096LNJ9 63 aa12.97□□□□□ -0.33
SPAST-202ENST00000345662 PROK1P58294 105 aa12.97□□□□□ -0.33
SPAST-202ENST00000345662 C9orf66Q5T8R8 295 aa12.97□□□□□ -0.33
SPAST-202ENST00000345662 LMO4P61968 165 aa12.96□□□□□ -0.33
SPAST-202ENST00000345662 C6orf99Q4VX62 202 aa12.96□□□□□ -0.34
SPAST-202ENST00000345662 LINC00526Q96FQ7 95 aa12.96□□□□□ -0.34
SPAST-202ENST00000345662 CRIP2P52943 208 aaPredicted RBP12.95□□□□□ -0.34
SPAST-202ENST00000345662 WFDC11Q8NEX6 87 aa12.95□□□□□ -0.34
SPAST-202ENST00000345662 SNURFQ9Y675 71 aa12.95□□□□□ -0.34
SPAST-202ENST00000345662 LINC00269Q8N2A0 174 aa12.95□□□□□ -0.34
SPAST-202ENST00000345662 C2CD3Q4AC94 2353 aa12.95□□□□□ -0.34
SPAST-202ENST00000345662 SMIM9A6NGZ8 99 aa12.95□□□□□ -0.34
SPAST-202ENST00000345662 MRPS36P82909 103 aaKnown RBP12.94□□□□□ -0.34
SPAST-202ENST00000345662 UBE2D4Q9Y2X8 147 aa12.94□□□□□ -0.34
SPAST-202ENST00000345662 BDP1A6H8Y1 2624 aa12.94□□□□□ -0.34
SPAST-202ENST00000345662 KLLNB2CW77 178 aa12.94□□□□□ -0.34
SPAST-202ENST00000345662 REG3AQ06141 175 aa12.94□□□□□ -0.34
SPAST-202ENST00000345662 POM121L12Q8N7R1 296 aa12.93□□□□□ -0.34
SPAST-202ENST00000345662 CRYGDP07320 174 aa12.93□□□□□ -0.34
SPAST-202ENST00000345662 NAV3Q8IVL0 2385 aa12.93□□□□□ -0.34
SPAST-202ENST00000345662 TNFRSF13BO14836 293 aaPredicted RBP12.93□□□□□ -0.34
SPAST-202ENST00000345662 CHCHD10Q8WYQ3 142 aaPredicted RBP12.93□□□□□ -0.34
SPAST-202ENST00000345662 SMIM11BQ8TCY0 68 aa12.92□□□□□ -0.34
SPAST-202ENST00000345662 LTBP2Q14767 1821 aa12.92□□□□□ -0.34
SPAST-202ENST00000345662 ACACBO00763 2458 aa12.91□□□□□ -0.34
SPAST-202ENST00000345662 C9orf85Q96MD7 179 aa12.91□□□□□ -0.34
SPAST-202ENST00000345662 HRCT1Q6UXD1 115 aa12.91□□□□□ -0.34
SPAST-202ENST00000345662 IGLV4-69A0A075B6H9 119 aa12.91□□□□□ -0.34
SPAST-202ENST00000345662 DEFB135Q30KP9 77 aa12.9□□□□□ -0.34
SPAST-202ENST00000345662 TRBV6-8A0A0A6YYG3 113 aa12.9□□□□□ -0.34
SPAST-202ENST00000345662 SMIM26A0A096LP01 95 aa12.9□□□□□ -0.34
SPAST-202ENST00000345662 DEFB4AO15263 64 aa12.9□□□□□ -0.34
SPAST-202ENST00000345662 Q8N6K4 173 aa12.9□□□□□ -0.34
SPAST-202ENST00000345662 EML5Q05BV3 1969 aa12.9□□□□□ -0.34
SPAST-202ENST00000345662 FAM19A3Q7Z5A8 133 aa12.89□□□□□ -0.35
SPAST-202ENST00000345662 ARHGAP32A7KAX9 2087 aa12.89□□□□□ -0.35
SPAST-202ENST00000345662 Q8NA96 180 aa12.89□□□□□ -0.35
SPAST-202ENST00000345662 H0Y9J4 135 aa12.88□□□□□ -0.35
SPAST-202ENST00000345662 DEFB113Q30KQ7 82 aa12.88□□□□□ -0.35
SPAST-202ENST00000345662 CCKP06307 115 aa12.88□□□□□ -0.35
SPAST-202ENST00000345662 PSMG3-AS1Q96PY0 264 aa12.88□□□□□ -0.35
SPAST-202ENST00000345662 CCL18P55774 89 aa12.87□□□□□ -0.35
SPAST-202ENST00000345662 TSPEAR-AS2P59090 65 aa12.87□□□□□ -0.35
SPAST-202ENST00000345662 TRBV6-4A0A1B0GX49 114 aa12.87□□□□□ -0.35
SPAST-202ENST00000345662 UBE2AP49459 152 aa12.86□□□□□ -0.35
SPAST-202ENST00000345662 DEFB114Q30KQ6 69 aa12.86□□□□□ -0.35
SPAST-202ENST00000345662 C1orf195Q5TG92 126 aa12.86□□□□□ -0.35
SPAST-202ENST00000345662 CDIP1Q9H305 208 aa12.86□□□□□ -0.35
SPAST-202ENST00000345662 Q6ZQY7 126 aa12.86□□□□□ -0.35
SPAST-202ENST00000345662 COX8CQ7Z4L0 72 aa12.86□□□□□ -0.35
SPAST-202ENST00000345662 FAM19A5Q7Z5A7 132 aaPredicted RBP12.84□□□□□ -0.35
SPAST-202ENST00000345662 SERP1Q9Y6X1 66 aa12.84□□□□□ -0.35
SPAST-202ENST00000345662 IGLV2-18A0A075B6J9 118 aa12.83□□□□□ -0.36
SPAST-202ENST00000345662 NRGNQ92686 78 aa12.83□□□□□ -0.36
SPAST-202ENST00000345662 XAGE1AQ9HD64 81 aa12.83□□□□□ -0.36
SPAST-202ENST00000345662 CSPG4Q6UVK1 2322 aa12.83□□□□□ -0.36
SPAST-202ENST00000345662 TRAV7A0A075B6U4 112 aa12.82□□□□□ -0.36
SPAST-202ENST00000345662 ATRXP46100 2492 aa12.82□□□□□ -0.36
SPAST-202ENST00000345662 A0A087WVE0 104 aa12.82□□□□□ -0.36
SPAST-202ENST00000345662 SORL1Q92673 2214 aa12.82□□□□□ -0.36
SPAST-202ENST00000345662 MUC22E2RYF6 1773 aaPredicted RBP12.81□□□□□ -0.36
SPAST-202ENST00000345662 Q6ZSV7 163 aa12.81□□□□□ -0.36
SPAST-202ENST00000345662 TECTAO75443 2155 aa12.81□□□□□ -0.36
SPAST-202ENST00000345662 C3orf84H3BNL1 204 aa12.8□□□□□ -0.36
SPAST-202ENST00000345662 DCANP1Q8TF63 244 aa12.8□□□□□ -0.36
SPAST-202ENST00000345662 MIFP14174 115 aa12.8□□□□□ -0.36
SPAST-202ENST00000345662 RPL28P46779 137 aaKnown RBP12.8□□□□□ -0.36
SPAST-202ENST00000345662 C1orf158Q8N1D5 194 aa12.8□□□□□ -0.36
SPAST-202ENST00000345662 IGKV4-1P06312 121 aa12.79□□□□□ -0.36
SPAST-202ENST00000345662 F8W735 103 aaPredicted RBP12.79□□□□□ -0.36
SPAST-202ENST00000345662 LINC00242Q5T6M2 205 aa12.79□□□□□ -0.36
SPAST-202ENST00000345662 LYRM9A8MSI8 78 aa12.78□□□□□ -0.36
SPAST-202ENST00000345662 ADAMTSL4-AS1Q5T5F5 129 aa12.78□□□□□ -0.36
SPAST-202ENST00000345662 CDC42SE2Q9NRR3 84 aa12.77□□□□□ -0.36
SPAST-202ENST00000345662 CD164L2Q6UWJ8 174 aa12.77□□□□□ -0.36
SPAST-202ENST00000345662 KLK5Q9Y337 293 aaPredicted RBP12.77□□□□□ -0.37
SPAST-202ENST00000345662 LINC00959A0A1B0GUT2 108 aa12.77□□□□□ -0.37
SPAST-202ENST00000345662 NTM-AS1Q6ZSK4 140 aa12.76□□□□□ -0.37
SPAST-202ENST00000345662 HIGD2AQ9BW72 106 aa12.76□□□□□ -0.37
SPAST-202ENST00000345662 MUC6Q6W4X9 2439 aa12.76□□□□□ -0.37
SPAST-202ENST00000345662 SMIM1B2RUZ4 78 aa12.75□□□□□ -0.37
SPAST-202ENST00000345662 C10orf99Q6UWK7 81 aa12.75□□□□□ -0.37
SPAST-202ENST00000345662 CSDC2Q9Y534 153 aaKnown RBP12.75□□□□□ -0.37
SPAST-202ENST00000345662 WFDC10BQ8IUB3 73 aa12.75□□□□□ -0.37
SPAST-202ENST00000345662 COX17Q14061 63 aa12.75□□□□□ -0.37
SPAST-202ENST00000345662 Q6YL49 198 aa12.75□□□□□ -0.37
SPAST-202ENST00000345662 TRBV7-7A0A0K0K1E9 115 aa12.74□□□□□ -0.37
SPAST-202ENST00000345662 C11orf71Q6IPW1 123 aa12.74□□□□□ -0.37
SPAST-202ENST00000345662 LOC107984640A0A0U1RRK4 108 aa12.73□□□□□ -0.37
SPAST-202ENST00000345662 C10orf142B7Z368 130 aa12.73□□□□□ -0.37
SPAST-202ENST00000345662 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.73□□□□□ -0.37
SPAST-202ENST00000345662 AMELXQ99217 191 aa12.73□□□□□ -0.37
SPAST-202ENST00000345662 B9D2Q9BPU9 175 aa12.73□□□□□ -0.37
SPAST-202ENST00000345662 ZNF580Q9UK33 172 aa12.73□□□□□ -0.37
SPAST-202ENST00000345662 PTPN13Q12923 2485 aa12.73□□□□□ -0.37
SPAST-202ENST00000345662 Q8IZM0 81 aa12.72□□□□□ -0.37
SPAST-202ENST00000345662 PRM2P04554 102 aa12.72□□□□□ -0.37
SPAST-202ENST00000345662 PRR4Q16378 134 aa12.72□□□□□ -0.37
SPAST-202ENST00000345662 A0A087WYN8 130 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms