RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 Q8N976 141 aa7.98□□□□□ -1.13
SNCA-202ENST00000345009 UBE2WQ96B02 151 aa7.98□□□□□ -1.13
SNCA-202ENST00000345009 Q9HAA7 133 aa7.98□□□□□ -1.13
SNCA-202ENST00000345009 NXT2Q9NPJ8 142 aaKnown RBP7.98□□□□□ -1.13
SNCA-202ENST00000345009 PRSS29PA6NIE9 313 aa7.97□□□□□ -1.13
SNCA-202ENST00000345009 RTL8CO15255 209 aa7.97□□□□□ -1.13
SNCA-202ENST00000345009 FGF6P10767 208 aa7.97□□□□□ -1.13
SNCA-202ENST00000345009 ESDP10768 282 aa7.97□□□□□ -1.13
SNCA-202ENST00000345009 KIAA1644Q3SXP7 199 aa7.97□□□□□ -1.13
SNCA-202ENST00000345009 OR5A1Q8NGJ0 315 aa7.97□□□□□ -1.13
SNCA-202ENST00000345009 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.96□□□□□ -1.14
SNCA-202ENST00000345009 IGKV2-29A2NJV5 120 aaPredicted RBP7.96□□□□□ -1.14
SNCA-202ENST00000345009 MIAQ16674 131 aa7.96□□□□□ -1.14
SNCA-202ENST00000345009 ORMDL2Q53FV1 153 aa7.96□□□□□ -1.14
SNCA-202ENST00000345009 CBLN2Q8IUK8 224 aa7.96□□□□□ -1.14
SNCA-202ENST00000345009 LINC00269Q8N2A0 174 aa7.96□□□□□ -1.14
SNCA-202ENST00000345009 Q8N8P6 123 aa7.96□□□□□ -1.14
SNCA-202ENST00000345009 PRSS3P2Q8NHM4 247 aa7.96□□□□□ -1.14
SNCA-202ENST00000345009 C1orf43Q9BWL3 253 aa7.96□□□□□ -1.14
SNCA-202ENST00000345009 TRAV8-4A0A0B4J246 113 aa7.95□□□□□ -1.14
SNCA-202ENST00000345009 REG3AQ06141 175 aa7.95□□□□□ -1.14
SNCA-202ENST00000345009 MRPL52Q86TS9 123 aaKnown RBP7.95□□□□□ -1.14
SNCA-202ENST00000345009 C20orf203Q8NBC4 194 aa7.95□□□□□ -1.14
SNCA-202ENST00000345009 ALKBH7Q9BT30 221 aaPredicted RBP7.95□□□□□ -1.14
SNCA-202ENST00000345009 IGKV2D-24A0A075B6R9 120 aa7.94□□□□□ -1.14
SNCA-202ENST00000345009 S100A1P23297 94 aa7.94□□□□□ -1.14
SNCA-202ENST00000345009 PRR34Q9NV39 138 aa7.94□□□□□ -1.14
SNCA-202ENST00000345009 CSDC2Q9Y534 153 aaKnown RBP7.94□□□□□ -1.14
SNCA-202ENST00000345009 IGLV4-60A0A075B6I1 120 aa7.93□□□□□ -1.14
SNCA-202ENST00000345009 IFI27P40305 119 aaPredicted RBP7.93□□□□□ -1.14
SNCA-202ENST00000345009 ENHOQ6UWT2 76 aa7.93□□□□□ -1.14
SNCA-202ENST00000345009 YPEL4Q96NS1 127 aa7.93□□□□□ -1.14
SNCA-202ENST00000345009 TIMM21Q9BVV7 248 aa7.93□□□□□ -1.14
SNCA-202ENST00000345009 SPANXA1Q9NS26 97 aa7.93□□□□□ -1.14
SNCA-202ENST00000345009 LINC01549A6NIU2 74 aa7.92□□□□□ -1.14
SNCA-202ENST00000345009 RAB5BP61020 215 aa7.92□□□□□ -1.14
SNCA-202ENST00000345009 Q6ZRN7 208 aaPredicted RBP7.92□□□□□ -1.14
SNCA-202ENST00000345009 FA2HQ7L5A8 372 aa7.92□□□□□ -1.14
SNCA-202ENST00000345009 ZNF664Q8N3J9 261 aa7.92□□□□□ -1.14
SNCA-202ENST00000345009 LINC00310P59036 64 aa7.91□□□□□ -1.14
SNCA-202ENST00000345009 CLPSL2Q6UWE3 100 aa7.91□□□□□ -1.14
SNCA-202ENST00000345009 CDC42SE2Q9NRR3 84 aa7.91□□□□□ -1.14
SNCA-202ENST00000345009 CYSLTR1Q9Y271 337 aa7.91□□□□□ -1.14
SNCA-202ENST00000345009 IGKV3OR2-268A0A0C4DH90 116 aa7.9□□□□□ -1.14
SNCA-202ENST00000345009 CCL25O15444 150 aa7.9□□□□□ -1.14
SNCA-202ENST00000345009 S100A6P06703 90 aa7.9□□□□□ -1.14
SNCA-202ENST00000345009 PAPPA-AS1Q5QFB9 102 aa7.9□□□□□ -1.14
SNCA-202ENST00000345009 KRTAP4-9Q9BYQ8 210 aa7.9□□□□□ -1.14
SNCA-202ENST00000345009 UBE2D4Q9Y2X8 147 aa7.9□□□□□ -1.14
SNCA-202ENST00000345009 ATP6V1G1O75348 118 aa7.89□□□□□ -1.15
SNCA-202ENST00000345009 RPL39P62891 51 aaKnown RBP7.89□□□□□ -1.15
SNCA-202ENST00000345009 CTAG1AP78358 180 aa7.89□□□□□ -1.15
SNCA-202ENST00000345009 SS18Q15532 418 aa7.89□□□□□ -1.15
SNCA-202ENST00000345009 C2orf66Q6UXQ4 117 aa7.89□□□□□ -1.15
SNCA-202ENST00000345009 PYGO1Q9Y3Y4 419 aa7.89□□□□□ -1.15
SNCA-202ENST00000345009 A0A087WTM6 91 aa7.88□□□□□ -1.15
SNCA-202ENST00000345009 COLCA2A8K830 154 aa7.88□□□□□ -1.15
SNCA-202ENST00000345009 C1orf196B1AJZ1 125 aa7.88□□□□□ -1.15
SNCA-202ENST00000345009 NPSP0C0P6 89 aa7.88□□□□□ -1.15
SNCA-202ENST00000345009 LINC00614P0C842 121 aa7.88□□□□□ -1.15
SNCA-202ENST00000345009 MRPS36P82909 103 aaKnown RBP7.88□□□□□ -1.15
SNCA-202ENST00000345009 C14orf177Q52M58 125 aa7.88□□□□□ -1.15
SNCA-202ENST00000345009 Q6ZN92 141 aa7.88□□□□□ -1.15
SNCA-202ENST00000345009 C18orf32Q8TCD1 76 aa7.88□□□□□ -1.15
SNCA-202ENST00000345009 DNAH10Q8IVF4 4471 aa7.88□□□□□ -1.15
SNCA-202ENST00000345009 IGLV10-54A0A075B6I4 117 aa7.87□□□□□ -1.15
SNCA-202ENST00000345009 LINC01546A6NGU7 62 aa7.87□□□□□ -1.15
SNCA-202ENST00000345009 TRGC2P03986 189 aa7.87□□□□□ -1.15
SNCA-202ENST00000345009 KRTAP19-4Q3LI73 84 aa7.87□□□□□ -1.15
SNCA-202ENST00000345009 DNAH2Q9P225 4427 aa7.87□□□□□ -1.15
SNCA-202ENST00000345009 LINC00959A0A1B0GUT2 108 aa7.86□□□□□ -1.15
SNCA-202ENST00000345009 CFAP161Q6P656 301 aa7.86□□□□□ -1.15
SNCA-202ENST00000345009 BAALCQ8WXS3 180 aa7.86□□□□□ -1.15
SNCA-202ENST00000345009 TOMM6Q96B49 74 aa7.86□□□□□ -1.15
SNCA-202ENST00000345009 TMEM141Q96I45 108 aa7.86□□□□□ -1.15
SNCA-202ENST00000345009 C2orf88Q9BSF0 95 aa7.86□□□□□ -1.15
SNCA-202ENST00000345009 VCX2Q9H322 139 aa7.86□□□□□ -1.15
SNCA-202ENST00000345009 FRAS1Q86XX4 4008 aa7.86□□□□□ -1.15
SNCA-202ENST00000345009 TRAV13-1A0A0B4J241 112 aa7.85□□□□□ -1.15
SNCA-202ENST00000345009 LRCOL1A6NCL2 159 aa7.85□□□□□ -1.15
SNCA-202ENST00000345009 SCO1O75880 301 aa7.85□□□□□ -1.15
SNCA-202ENST00000345009 TEX43Q6ZNM6 134 aa7.85□□□□□ -1.15
SNCA-202ENST00000345009 BAGE3Q86Y29 109 aa7.85□□□□□ -1.15
SNCA-202ENST00000345009 CHCHD10Q8WYQ3 142 aaPredicted RBP7.85□□□□□ -1.15
SNCA-202ENST00000345009 SCGB3A1Q96QR1 104 aa7.85□□□□□ -1.15
SNCA-202ENST00000345009 A0A1B0GVY2 172 aa7.84□□□□□ -1.15
SNCA-202ENST00000345009 GAGE12HA6NDE8 117 aa7.84□□□□□ -1.15
SNCA-202ENST00000345009 IFITM10A6NMD0 228 aa7.84□□□□□ -1.15
SNCA-202ENST00000345009 XCL1P47992 114 aa7.84□□□□□ -1.15
SNCA-202ENST00000345009 CD164L2Q6UWJ8 174 aa7.84□□□□□ -1.15
SNCA-202ENST00000345009 Q6ZUT4 128 aa7.84□□□□□ -1.15
SNCA-202ENST00000345009 ERASQ7Z444 233 aa7.84□□□□□ -1.15
SNCA-202ENST00000345009 SPATA12Q7Z6I5 190 aa7.84□□□□□ -1.15
SNCA-202ENST00000345009 NTN5Q8WTR8 489 aaPredicted RBP7.84□□□□□ -1.15
SNCA-202ENST00000345009 CHCHD1Q96BP2 118 aaKnown RBP7.84□□□□□ -1.15
SNCA-202ENST00000345009 TIMM17AQ99595 171 aa7.84□□□□□ -1.15
SNCA-202ENST00000345009 DNAH17Q9UFH2 4485 aa7.83□□□□□ -1.16
SNCA-202ENST00000345009 IGIPA6NJ69 53 aa7.83□□□□□ -1.16
SNCA-202ENST00000345009 RNASE13Q5GAN3 156 aaKnown RBP7.83□□□□□ -1.16
SNCA-202ENST00000345009 LINC00469Q8N7U9 141 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms