RNA–Protein interactions for RNA: ENST00000344586.8

NKX2-3-201, Transcript of NK2 homeobox 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NKX2-3, Length 2,097 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-201ENST00000344586 IGLV5-39A0A0G2JS06 123 aa16.6■□□□□ 0.25
NKX2-3-201ENST00000344586 TEX29Q8N6K0 151 aa16.6■□□□□ 0.25
NKX2-3-201ENST00000344586 ODF3L2Q3SX64 289 aa16.59■□□□□ 0.25
NKX2-3-201ENST00000344586 LINC00242Q5T6M2 205 aa16.59■□□□□ 0.25
NKX2-3-201ENST00000344586 ANKRD17O75179 2603 aaKnown RBP16.59■□□□□ 0.25
NKX2-3-201ENST00000344586 LINC00694P0DN24 101 aa16.58■□□□□ 0.25
NKX2-3-201ENST00000344586 CLUHP3Q96NS8 147 aa16.58■□□□□ 0.25
NKX2-3-201ENST00000344586 IGSF10Q6WRI0 2623 aa16.58■□□□□ 0.25
NKX2-3-201ENST00000344586 CREBBPQ92793 2442 aa16.58■□□□□ 0.24
NKX2-3-201ENST00000344586 CRLF1O75462 422 aa16.58■□□□□ 0.24
NKX2-3-201ENST00000344586 HERVK_113P63121 156 aa16.58■□□□□ 0.24
NKX2-3-201ENST00000344586 CITED2Q99967 270 aaPredicted RBP16.58■□□□□ 0.24
NKX2-3-201ENST00000344586 USP9YO00507 2555 aaPredicted RBP16.57■□□□□ 0.24
NKX2-3-201ENST00000344586 C1orf158Q8N1D5 194 aa16.57■□□□□ 0.24
NKX2-3-201ENST00000344586 Q9H8V8 135 aa16.57■□□□□ 0.24
NKX2-3-201ENST00000344586 TRAV4A0A0B4J268 109 aa16.57■□□□□ 0.24
NKX2-3-201ENST00000344586 SNCGO76070 127 aa16.57■□□□□ 0.24
NKX2-3-201ENST00000344586 LINC00308Q8TCZ7 52 aa16.56■□□□□ 0.24
NKX2-3-201ENST00000344586 ANAPC13Q9BS18 74 aa16.56■□□□□ 0.24
NKX2-3-201ENST00000344586 TRGV1A0A0A0MS02 117 aa16.55■□□□□ 0.24
NKX2-3-201ENST00000344586 CIRBPQ14011 172 aaKnown RBP16.55■□□□□ 0.24
NKX2-3-201ENST00000344586 FAM19A3Q7Z5A8 133 aa16.55■□□□□ 0.24
NKX2-3-201ENST00000344586 NDUFA7O95182 113 aa16.55■□□□□ 0.24
NKX2-3-201ENST00000344586 SMIM1B2RUZ4 78 aa16.54■□□□□ 0.24
NKX2-3-201ENST00000344586 KRTAP10-9P60411 292 aa16.53■□□□□ 0.24
NKX2-3-201ENST00000344586 NTM-AS1Q6ZSK4 140 aa16.53■□□□□ 0.24
NKX2-3-201ENST00000344586 STHQ8IWL8 128 aa16.53■□□□□ 0.24
NKX2-3-201ENST00000344586 ZNF625Q96I27 306 aaPredicted RBP16.53■□□□□ 0.24
NKX2-3-201ENST00000344586 K7EQD1 137 aa16.52■□□□□ 0.23
NKX2-3-201ENST00000344586 GAGE2BQ13066 116 aa16.52■□□□□ 0.23
NKX2-3-201ENST00000344586 GAGE2EQ4V326 116 aa16.52■□□□□ 0.23
NKX2-3-201ENST00000344586 GAGE2DQ9UEU5 116 aa16.52■□□□□ 0.23
NKX2-3-201ENST00000344586 CSDC2Q9Y534 153 aaKnown RBP16.52■□□□□ 0.23
NKX2-3-201ENST00000344586 POLQO75417 2590 aa16.51■□□□□ 0.23
NKX2-3-201ENST00000344586 RPL36AP83881 106 aaKnown RBP16.5■□□□□ 0.23
NKX2-3-201ENST00000344586 DEFB121Q5J5C9 76 aa16.5■□□□□ 0.23
NKX2-3-201ENST00000344586 SOSTDC1Q6X4U4 206 aa16.5■□□□□ 0.23
NKX2-3-201ENST00000344586 Q6ZTI0 123 aa16.5■□□□□ 0.23
NKX2-3-201ENST00000344586 RPL36ALQ969Q0 106 aaKnown RBP16.5■□□□□ 0.23
NKX2-3-201ENST00000344586 TRAV13-1A0A0B4J241 112 aa16.5■□□□□ 0.23
NKX2-3-201ENST00000344586 TRBV10-1A0A0K0K1A3 114 aa16.5■□□□□ 0.23
NKX2-3-201ENST00000344586 A0A0U1RRA0 63 aa16.49■□□□□ 0.23
NKX2-3-201ENST00000344586 NHLRC4P0CG21 123 aaPredicted RBP16.49■□□□□ 0.23
NKX2-3-201ENST00000344586 C15orf53Q8NAA6 179 aa16.49■□□□□ 0.23
NKX2-3-201ENST00000344586 DAZ2Q13117 558 aaKnown RBP16.49■□□□□ 0.23
NKX2-3-201ENST00000344586 DAZ4Q86SG3 579 aaKnown RBP16.49■□□□□ 0.23
NKX2-3-201ENST00000344586 DAZ3Q9NR90 486 aaKnown RBP16.49■□□□□ 0.23
NKX2-3-201ENST00000344586 TRAV25A0A0B4J276 109 aa16.48■□□□□ 0.23
NKX2-3-201ENST00000344586 F5H768 121 aa16.48■□□□□ 0.23
NKX2-3-201ENST00000344586 Q6Q795 121 aa16.47■□□□□ 0.23
NKX2-3-201ENST00000344586 DEFB113Q30KQ7 82 aa16.47■□□□□ 0.23
NKX2-3-201ENST00000344586 CDC42SE2Q9NRR3 84 aa16.47■□□□□ 0.23
NKX2-3-201ENST00000344586 AKAP9Q99996 3911 aa16.46■□□□□ 0.23
NKX2-3-201ENST00000344586 NDUFV3P56181 108 aaKnown RBP16.46■□□□□ 0.23
NKX2-3-201ENST00000344586 PRB1P04280 392 aa16.46■□□□□ 0.22
NKX2-3-201ENST00000344586 PRIMA1Q86XR5 153 aa16.46■□□□□ 0.22
NKX2-3-201ENST00000344586 FAM240AA0A1B0GVK7 77 aa16.45■□□□□ 0.22
NKX2-3-201ENST00000344586 GAGE12JA6NER3 117 aa16.45■□□□□ 0.22
NKX2-3-201ENST00000344586 COX7A2LO14548 114 aa16.45■□□□□ 0.22
NKX2-3-201ENST00000344586 GAGE4Q13068 117 aa16.45■□□□□ 0.22
NKX2-3-201ENST00000344586 GAGE5Q13069 117 aa16.45■□□□□ 0.22
NKX2-3-201ENST00000344586 Q96MF0 132 aa16.45■□□□□ 0.22
NKX2-3-201ENST00000344586 ACACBO00763 2458 aa16.45■□□□□ 0.22
NKX2-3-201ENST00000344586 MYO18BQ8IUG5 2567 aa16.44■□□□□ 0.22
NKX2-3-201ENST00000344586 SHISA2Q6UWI4 295 aa16.44■□□□□ 0.22
NKX2-3-201ENST00000344586 COPS9Q8WXC6 57 aa16.44■□□□□ 0.22
NKX2-3-201ENST00000344586 A0A1W2PRX2 142 aa16.44■□□□□ 0.22
NKX2-3-201ENST00000344586 MEIG1Q5JSS6 88 aa16.43■□□□□ 0.22
NKX2-3-201ENST00000344586 TTC32Q5I0X7 151 aa16.42■□□□□ 0.22
NKX2-3-201ENST00000344586 C11orf44Q8N8P7 122 aa16.42■□□□□ 0.22
NKX2-3-201ENST00000344586 MRPL23Q16540 153 aaKnown RBP16.42■□□□□ 0.22
NKX2-3-201ENST00000344586 TMEM86BQ8N661 226 aa16.41■□□□□ 0.22
NKX2-3-201ENST00000344586 HERV-K104P63124 156 aa16.41■□□□□ 0.22
NKX2-3-201ENST00000344586 NOP10Q9NPE3 64 aaKnown RBP16.41■□□□□ 0.22
NKX2-3-201ENST00000344586 LRRC75A-AS1Q8N1F1 130 aa16.4■□□□□ 0.22
NKX2-3-201ENST00000344586 CCL24O00175 119 aa16.39■□□□□ 0.21
NKX2-3-201ENST00000344586 KRTAP1-3Q8IUG1 177 aa16.39■□□□□ 0.21
NKX2-3-201ENST00000344586 TEX15Q9BXT5 2789 aa16.39■□□□□ 0.21
NKX2-3-201ENST00000344586 TMEM243Q9BU79 118 aa16.39■□□□□ 0.21
NKX2-3-201ENST00000344586 GIG44P09565 113 aaPredicted RBP16.38■□□□□ 0.21
NKX2-3-201ENST00000344586 DNAJC9-AS1A6NH13 148 aa16.38■□□□□ 0.21
NKX2-3-201ENST00000344586 GAGE6Q13070 117 aa16.38■□□□□ 0.21
NKX2-3-201ENST00000344586 PLAC8L1A1L4L8 177 aa16.37■□□□□ 0.21
NKX2-3-201ENST00000344586 UBE2L6O14933 153 aa16.37■□□□□ 0.21
NKX2-3-201ENST00000344586 PPDPFQ9H3Y8 114 aa16.37■□□□□ 0.21
NKX2-3-201ENST00000344586 LOC100131303A0A0U1RQF7 123 aa16.35■□□□□ 0.21
NKX2-3-201ENST00000344586 MYO9AB2RTY4 2548 aa16.35■□□□□ 0.21
NKX2-3-201ENST00000344586 CENPEQ02224 2701 aa16.34■□□□□ 0.21
NKX2-3-201ENST00000344586 ZNF469Q96JG9 3925 aaPredicted RBP16.34■□□□□ 0.21
NKX2-3-201ENST00000344586 USP24Q9UPU5 2620 aa16.33■□□□□ 0.21
NKX2-3-201ENST00000344586 TRACP01848 142 aa16.33■□□□□ 0.21
NKX2-3-201ENST00000344586 CHD6Q8TD26 2715 aa16.33■□□□□ 0.2
NKX2-3-201ENST00000344586 GAGE7O76087 117 aa16.33■□□□□ 0.2
NKX2-3-201ENST00000344586 GAGE12FP0CL80 117 aa16.33■□□□□ 0.2
NKX2-3-201ENST00000344586 GAGE12GP0CL81 117 aa16.33■□□□□ 0.2
NKX2-3-201ENST00000344586 GAGE12IP0CL82 117 aa16.33■□□□□ 0.2
NKX2-3-201ENST00000344586 C16orf74Q96GX8 76 aa16.33■□□□□ 0.2
NKX2-3-201ENST00000344586 FAM218AQ96MZ4 157 aa16.33■□□□□ 0.2
NKX2-3-201ENST00000344586 FAM208BQ5VWN6 2430 aa16.32■□□□□ 0.2
NKX2-3-201ENST00000344586 BBC3Q96PG8 261 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms