RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 RBMY1DP0C7P1 496 aaKnown RBP6.94□□□□□ -1.3
HOXA1-201ENST00000343060 KLRB1Q12918 225 aa6.94□□□□□ -1.3
HOXA1-201ENST00000343060 C11orf72Q8NBR9 251 aa6.94□□□□□ -1.3
HOXA1-201ENST00000343060 OVOL2Q9BRP0 275 aa6.94□□□□□ -1.3
HOXA1-201ENST00000343060 ASH1LQ9NR48 2969 aaKnown RBP6.94□□□□□ -1.3
HOXA1-201ENST00000343060 PTPRZ1P23471 2315 aaPredicted RBP6.94□□□□□ -1.3
HOXA1-201ENST00000343060 IGHV4-61A0A0C4DH41 118 aa6.94□□□□□ -1.3
HOXA1-201ENST00000343060 MALP21145 153 aa6.94□□□□□ -1.3
HOXA1-201ENST00000343060 HIST2H2BCQ6DN03 193 aa6.94□□□□□ -1.3
HOXA1-201ENST00000343060 HIST2H2BDQ6DRA6 164 aa6.94□□□□□ -1.3
HOXA1-201ENST00000343060 COL6A6A6NMZ7 2263 aa6.94□□□□□ -1.3
HOXA1-201ENST00000343060 IGHV3-38A0A0C4DH36 116 aa6.93□□□□□ -1.3
HOXA1-201ENST00000343060 OBSCN-AS1Q96MR7 158 aa6.93□□□□□ -1.3
HOXA1-201ENST00000343060 TTC28Q96AY4 2481 aa6.93□□□□□ -1.3
HOXA1-201ENST00000343060 TRAV13-2A0A0B4J235 113 aa6.93□□□□□ -1.3
HOXA1-201ENST00000343060 PRIMA1Q86XR5 153 aa6.93□□□□□ -1.3
HOXA1-201ENST00000343060 SYNJ2BPP57105 145 aa6.92□□□□□ -1.3
HOXA1-201ENST00000343060 DGAT2L7PQ6IED9 249 aa6.92□□□□□ -1.3
HOXA1-201ENST00000343060 Q6JHZ5 121 aa6.92□□□□□ -1.3
HOXA1-201ENST00000343060 GAGE2AQ6NT46 116 aa6.92□□□□□ -1.3
HOXA1-201ENST00000343060 KLK5Q9Y337 293 aaPredicted RBP6.92□□□□□ -1.3
HOXA1-201ENST00000343060 RELNP78509 3460 aa6.92□□□□□ -1.3
HOXA1-201ENST00000343060 RPL18AQ02543 176 aaKnown RBP6.92□□□□□ -1.3
HOXA1-201ENST00000343060 PIMREGQ9BSJ6 248 aa6.92□□□□□ -1.3
HOXA1-201ENST00000343060 SPTA1P02549 2419 aa6.92□□□□□ -1.3
HOXA1-201ENST00000343060 A0A0U1RRA0 63 aa6.91□□□□□ -1.3
HOXA1-201ENST00000343060 LOC107984640A0A0U1RRK4 108 aa6.91□□□□□ -1.3
HOXA1-201ENST00000343060 C10orf99Q6UWK7 81 aa6.91□□□□□ -1.3
HOXA1-201ENST00000343060 HTN1P15515 57 aa6.91□□□□□ -1.3
HOXA1-201ENST00000343060 C5orf47Q569G3 176 aa6.91□□□□□ -1.3
HOXA1-201ENST00000343060 C10orf105Q8TEF2 133 aa6.91□□□□□ -1.3
HOXA1-201ENST00000343060 SPTAN1Q13813 2472 aaKnown RBP6.9□□□□□ -1.3
HOXA1-201ENST00000343060 CRPP02741 224 aa6.9□□□□□ -1.3
HOXA1-201ENST00000343060 PRM2P04554 102 aa6.9□□□□□ -1.3
HOXA1-201ENST00000343060 RIF1Q5UIP0 2472 aaKnown RBP6.9□□□□□ -1.31
HOXA1-201ENST00000343060 SMIM9A6NGZ8 99 aa6.9□□□□□ -1.31
HOXA1-201ENST00000343060 HOXD3P31249 432 aaPredicted RBP6.9□□□□□ -1.31
HOXA1-201ENST00000343060 DEFB131AP59861 70 aa6.9□□□□□ -1.31
HOXA1-201ENST00000343060 FAM19A5Q7Z5A7 132 aaPredicted RBP6.9□□□□□ -1.31
HOXA1-201ENST00000343060 LINC00337Q8N6G1 96 aa6.9□□□□□ -1.31
HOXA1-201ENST00000343060 UPK3BQ9BT76 320 aa6.9□□□□□ -1.31
HOXA1-201ENST00000343060 Q9HAA7 133 aa6.9□□□□□ -1.31
HOXA1-201ENST00000343060 IGKV2-28A0A075B6P5 120 aa6.89□□□□□ -1.31
HOXA1-201ENST00000343060 DNAL4O96015 105 aa6.89□□□□□ -1.31
HOXA1-201ENST00000343060 IGKV2D-28P01615 120 aa6.89□□□□□ -1.31
HOXA1-201ENST00000343060 IL17DQ8TAD2 202 aa6.89□□□□□ -1.31
HOXA1-201ENST00000343060 TMEM258P61165 79 aa6.89□□□□□ -1.31
HOXA1-201ENST00000343060 CDC42SE2Q9NRR3 84 aa6.89□□□□□ -1.31
HOXA1-201ENST00000343060 hADV29S1A0JD25 119 aa6.88□□□□□ -1.31
HOXA1-201ENST00000343060 MSMBP08118 114 aa6.88□□□□□ -1.31
HOXA1-201ENST00000343060 SERP2Q8N6R1 65 aa6.88□□□□□ -1.31
HOXA1-201ENST00000343060 Q96MF0 132 aa6.88□□□□□ -1.31
HOXA1-201ENST00000343060 CYSTM1Q9H1C7 97 aa6.88□□□□□ -1.31
HOXA1-201ENST00000343060 SORL1Q92673 2214 aa6.88□□□□□ -1.31
HOXA1-201ENST00000343060 TRBV10-1A0A0K0K1A3 114 aa6.88□□□□□ -1.31
HOXA1-201ENST00000343060 NBL1P41271 181 aa6.88□□□□□ -1.31
HOXA1-201ENST00000343060 C9orf129Q5T035 196 aaKnown RBP6.88□□□□□ -1.31
HOXA1-201ENST00000343060 NTM-AS1Q6ZSK4 140 aa6.88□□□□□ -1.31
HOXA1-201ENST00000343060 A0A087WYN8 130 aa6.87□□□□□ -1.31
HOXA1-201ENST00000343060 TRAV13-1A0A0B4J241 112 aa6.87□□□□□ -1.31
HOXA1-201ENST00000343060 H0YGX0 51 aa6.87□□□□□ -1.31
HOXA1-201ENST00000343060 NBASA2RRP1 2371 aa6.87□□□□□ -1.31
HOXA1-201ENST00000343060 AVPP01185 164 aa6.87□□□□□ -1.31
HOXA1-201ENST00000343060 INSP01308 110 aa6.87□□□□□ -1.31
HOXA1-201ENST00000343060 UCNP55089 124 aa6.87□□□□□ -1.31
HOXA1-201ENST00000343060 SMIM11BQ8TCY0 68 aa6.87□□□□□ -1.31
HOXA1-201ENST00000343060 UBE2E2Q96LR5 201 aa6.87□□□□□ -1.31
HOXA1-201ENST00000343060 LINC00846Q9NV44 126 aa6.87□□□□□ -1.31
HOXA1-201ENST00000343060 IGHV4-59P01825 116 aa6.86□□□□□ -1.31
HOXA1-201ENST00000343060 SND1-IT1Q9HBX3 110 aa6.86□□□□□ -1.31
HOXA1-201ENST00000343060 C14orf132Q9NPU4 83 aa6.86□□□□□ -1.31
HOXA1-201ENST00000343060 HIVEP3Q5T1R4 2406 aa6.86□□□□□ -1.31
HOXA1-201ENST00000343060 MIR7-3HGQ8N6C7 128 aa6.86□□□□□ -1.31
HOXA1-201ENST00000343060 OR13C6PQ8NH95 151 aa6.86□□□□□ -1.31
HOXA1-201ENST00000343060 C19orf84I3L1E1 186 aa6.85□□□□□ -1.31
HOXA1-201ENST00000343060 K7EQD1 137 aa6.85□□□□□ -1.31
HOXA1-201ENST00000343060 RPL36AP83881 106 aaKnown RBP6.85□□□□□ -1.31
HOXA1-201ENST00000343060 LINC01561Q8N1V8 128 aa6.85□□□□□ -1.31
HOXA1-201ENST00000343060 RPL36ALQ969Q0 106 aaKnown RBP6.85□□□□□ -1.31
HOXA1-201ENST00000343060 MAP6D1Q9H9H5 199 aa6.85□□□□□ -1.31
HOXA1-201ENST00000343060 AKAP6Q13023 2319 aa6.85□□□□□ -1.31
HOXA1-201ENST00000343060 IGHV4-30-2A0A087WSY4 118 aa6.85□□□□□ -1.31
HOXA1-201ENST00000343060 COX7B2Q8TF08 81 aa6.85□□□□□ -1.31
HOXA1-201ENST00000343060 DPH3Q96FX2 82 aa6.85□□□□□ -1.31
HOXA1-201ENST00000343060 CELSR1Q9NYQ6 3014 aa6.84□□□□□ -1.31
HOXA1-201ENST00000343060 WIPF1O43516 503 aa6.84□□□□□ -1.31
HOXA1-201ENST00000343060 DEFB112Q30KQ8 113 aa6.84□□□□□ -1.31
HOXA1-201ENST00000343060 IGKV3D-7A0A0C4DH55 119 aa6.84□□□□□ -1.31
HOXA1-201ENST00000343060 USP17L23D6RBM5 183 aa6.84□□□□□ -1.31
HOXA1-201ENST00000343060 ZFHX2Q9C0A1 2572 aaPredicted RBP6.83□□□□□ -1.32
HOXA1-201ENST00000343060 LY6G6DO95868 133 aa6.83□□□□□ -1.32
HOXA1-201ENST00000343060 CCL18P55774 89 aa6.83□□□□□ -1.32
HOXA1-201ENST00000343060 CEP295Q9C0D2 2601 aa6.83□□□□□ -1.32
HOXA1-201ENST00000343060 SS18Q15532 418 aa6.83□□□□□ -1.32
HOXA1-201ENST00000343060 LINC00167Q96N53 147 aa6.83□□□□□ -1.32
HOXA1-201ENST00000343060 ZNF702PQ9H963 129 aa6.83□□□□□ -1.32
HOXA1-201ENST00000343060 IBA57-AS1B1ANH7 110 aa6.82□□□□□ -1.32
HOXA1-201ENST00000343060 B4DSR2 109 aa6.82□□□□□ -1.32
HOXA1-201ENST00000343060 SLURP1P55000 103 aa6.82□□□□□ -1.32
HOXA1-201ENST00000343060 ATP5J2P56134 94 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms