RNA–Protein interactions for RNA: ENST00000343053.4

NELFB-201, Transcript of negative elongation factor complex member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NELFB, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFB-201ENST00000343053 FLNAP21333 2647 aaKnown RBP17.37■□□□□ 0.37
NELFB-201ENST00000343053 PEMTQ9UBM1 199 aa17.35■□□□□ 0.37
NELFB-201ENST00000343053 LINC01620Q4KN68 170 aa17.34■□□□□ 0.37
NELFB-201ENST00000343053 MTORP42345 2549 aa17.34■□□□□ 0.37
NELFB-201ENST00000343053 TINCRA0A1B0GVN0 87 aa17.34■□□□□ 0.37
NELFB-201ENST00000343053 INSP01308 110 aa17.34■□□□□ 0.37
NELFB-201ENST00000343053 COX6A2Q02221 97 aa17.34■□□□□ 0.37
NELFB-201ENST00000343053 DGAT2L7PQ6IED9 249 aa17.34■□□□□ 0.37
NELFB-201ENST00000343053 CLEC2BQ92478 149 aa17.34■□□□□ 0.37
NELFB-201ENST00000343053 EDA2RQ9HAV5 297 aa17.34■□□□□ 0.37
NELFB-201ENST00000343053 SPANXA1Q9NS26 97 aa17.34■□□□□ 0.37
NELFB-201ENST00000343053 TRGV1A0A0A0MS02 117 aa17.33■□□□□ 0.36
NELFB-201ENST00000343053 TEX49A0A1B0GTD5 131 aa17.33■□□□□ 0.36
NELFB-201ENST00000343053 DEFB114Q30KQ6 69 aa17.33■□□□□ 0.36
NELFB-201ENST00000343053 ACANP16112 2415 aa17.33■□□□□ 0.36
NELFB-201ENST00000343053 ATXN8Q156A1 80 aa17.33■□□□□ 0.36
NELFB-201ENST00000343053 A8MTW9 85 aa17.32■□□□□ 0.36
NELFB-201ENST00000343053 LINC00694P0DN24 101 aa17.32■□□□□ 0.36
NELFB-201ENST00000343053 MIAQ16674 131 aa17.32■□□□□ 0.36
NELFB-201ENST00000343053 ICOSQ9Y6W8 199 aa17.32■□□□□ 0.36
NELFB-201ENST00000343053 Q96MF0 132 aa17.31■□□□□ 0.36
NELFB-201ENST00000343053 ODF3L2Q3SX64 289 aa17.31■□□□□ 0.36
NELFB-201ENST00000343053 C4orf3Q8WVX3 66 aa17.31■□□□□ 0.36
NELFB-201ENST00000343053 TMEM101Q96IK0 257 aa17.29■□□□□ 0.36
NELFB-201ENST00000343053 BBC3Q96PG8 261 aaPredicted RBP17.29■□□□□ 0.36
NELFB-201ENST00000343053 TRAV13-1A0A0B4J241 112 aa17.28■□□□□ 0.36
NELFB-201ENST00000343053 ZFAND6Q6FIF0 208 aa17.28■□□□□ 0.36
NELFB-201ENST00000343053 RPL13AP40429 203 aaKnown RBP17.27■□□□□ 0.36
NELFB-201ENST00000343053 SPANXDQ9BXN6 97 aa17.27■□□□□ 0.36
NELFB-201ENST00000343053 SPANXCQ9NY87 97 aa17.27■□□□□ 0.36
NELFB-201ENST00000343053 TRBV30A0A0K0K1B3 111 aa17.26■□□□□ 0.35
NELFB-201ENST00000343053 Q6ZTI0 123 aa17.26■□□□□ 0.35
NELFB-201ENST00000343053 STHQ8IWL8 128 aa17.26■□□□□ 0.35
NELFB-201ENST00000343053 RS1O15537 224 aa17.26■□□□□ 0.35
NELFB-201ENST00000343053 C1orf158Q8N1D5 194 aa17.26■□□□□ 0.35
NELFB-201ENST00000343053 Q9H8V8 135 aa17.25■□□□□ 0.35
NELFB-201ENST00000343053 BEAN1Q3B7T3 259 aa17.24■□□□□ 0.35
NELFB-201ENST00000343053 RNF183Q96D59 192 aa17.24■□□□□ 0.35
NELFB-201ENST00000343053 C2orf82Q6UX34 121 aa17.23■□□□□ 0.35
NELFB-201ENST00000343053 WFDC10AQ9H1F0 79 aa17.23■□□□□ 0.35
NELFB-201ENST00000343053 GAGE12JA6NER3 117 aa17.23■□□□□ 0.35
NELFB-201ENST00000343053 GAGE4Q13068 117 aa17.23■□□□□ 0.35
NELFB-201ENST00000343053 GAGE5Q13069 117 aa17.23■□□□□ 0.35
NELFB-201ENST00000343053 Q8N2B8 174 aa17.23■□□□□ 0.35
NELFB-201ENST00000343053 LINC00242Q5T6M2 205 aa17.22■□□□□ 0.35
NELFB-201ENST00000343053 H7C423 109 aa17.22■□□□□ 0.35
NELFB-201ENST00000343053 DEFB113Q30KQ7 82 aa17.22■□□□□ 0.35
NELFB-201ENST00000343053 TRBV10-2A0A0K0K1G8 114 aa17.21■□□□□ 0.35
NELFB-201ENST00000343053 DNAJC30Q96LL9 226 aa17.21■□□□□ 0.35
NELFB-201ENST00000343053 CRLF1O75462 422 aa17.21■□□□□ 0.35
NELFB-201ENST00000343053 FN1P02751 2386 aaKnown RBP17.21■□□□□ 0.34
NELFB-201ENST00000343053 NTM-AS1Q6ZSK4 140 aa17.2■□□□□ 0.34
NELFB-201ENST00000343053 UBE2WQ96B02 151 aa17.19■□□□□ 0.34
NELFB-201ENST00000343053 PIK3CD-AS1Q5SR53 167 aa17.19■□□□□ 0.34
NELFB-201ENST00000343053 NDUFA1O15239 70 aa17.18■□□□□ 0.34
NELFB-201ENST00000343053 NOP10Q9NPE3 64 aaKnown RBP17.18■□□□□ 0.34
NELFB-201ENST00000343053 SS18L2Q9UHA2 77 aa17.18■□□□□ 0.34
NELFB-201ENST00000343053 COX6CP09669 75 aa17.18■□□□□ 0.34
NELFB-201ENST00000343053 PLA2G2AP14555 144 aa17.17■□□□□ 0.34
NELFB-201ENST00000343053 TRAV4A0A0B4J268 109 aa17.17■□□□□ 0.34
NELFB-201ENST00000343053 TMEM262E9PQX1 116 aa17.17■□□□□ 0.34
NELFB-201ENST00000343053 CITED2Q99967 270 aaPredicted RBP17.17■□□□□ 0.34
NELFB-201ENST00000343053 IGKV3OR2-268A0A0C4DH90 116 aa17.16■□□□□ 0.34
NELFB-201ENST00000343053 LOC100131303A0A0U1RQF7 123 aa17.16■□□□□ 0.34
NELFB-201ENST00000343053 YAE1D1Q9NRH1 226 aa17.16■□□□□ 0.34
NELFB-201ENST00000343053 K7EQD1 137 aa17.15■□□□□ 0.34
NELFB-201ENST00000343053 TIRAPP58753 221 aa17.15■□□□□ 0.34
NELFB-201ENST00000343053 LINC00308Q8TCZ7 52 aa17.15■□□□□ 0.34
NELFB-201ENST00000343053 TRAV8-4A0A0B4J246 113 aa17.15■□□□□ 0.34
NELFB-201ENST00000343053 SMIM1B2RUZ4 78 aa17.15■□□□□ 0.34
NELFB-201ENST00000343053 RPL36AP83881 106 aaKnown RBP17.15■□□□□ 0.34
NELFB-201ENST00000343053 MEIG1Q5JSS6 88 aa17.15■□□□□ 0.34
NELFB-201ENST00000343053 SOSTDC1Q6X4U4 206 aa17.15■□□□□ 0.34
NELFB-201ENST00000343053 RPL36ALQ969Q0 106 aaKnown RBP17.15■□□□□ 0.34
NELFB-201ENST00000343053 IGLV5-45A0A087WSX0 123 aa17.14■□□□□ 0.34
NELFB-201ENST00000343053 DNAJC9-AS1A6NH13 148 aa17.14■□□□□ 0.34
NELFB-201ENST00000343053 PRIMA1Q86XR5 153 aa17.14■□□□□ 0.33
NELFB-201ENST00000343053 CCL24O00175 119 aa17.14■□□□□ 0.33
NELFB-201ENST00000343053 HERVK_113P63121 156 aa17.14■□□□□ 0.33
NELFB-201ENST00000343053 GCN1Q92616 2671 aaKnown RBP17.13■□□□□ 0.33
NELFB-201ENST00000343053 RPL35AP18077 110 aaKnown RBP17.13■□□□□ 0.33
NELFB-201ENST00000343053 TEX29Q8N6K0 151 aa17.13■□□□□ 0.33
NELFB-201ENST00000343053 CIRBPQ14011 172 aaKnown RBP17.13■□□□□ 0.33
NELFB-201ENST00000343053 M0QXV9 152 aa17.12■□□□□ 0.33
NELFB-201ENST00000343053 WFDC11Q8NEX6 87 aa17.12■□□□□ 0.33
NELFB-201ENST00000343053 ESM1Q9NQ30 184 aa17.12■□□□□ 0.33
NELFB-201ENST00000343053 NBEAL2Q6ZNJ1 2754 aa17.12■□□□□ 0.33
NELFB-201ENST00000343053 LST1O00453 97 aa17.12■□□□□ 0.33
NELFB-201ENST00000343053 SNCGO76070 127 aa17.12■□□□□ 0.33
NELFB-201ENST00000343053 GAGE7O76087 117 aa17.12■□□□□ 0.33
NELFB-201ENST00000343053 GAGE12FP0CL80 117 aa17.12■□□□□ 0.33
NELFB-201ENST00000343053 GAGE12GP0CL81 117 aa17.12■□□□□ 0.33
NELFB-201ENST00000343053 GAGE12IP0CL82 117 aa17.12■□□□□ 0.33
NELFB-201ENST00000343053 HIST2H2BCQ6DN03 193 aa17.12■□□□□ 0.33
NELFB-201ENST00000343053 ANAPC13Q9BS18 74 aa17.12■□□□□ 0.33
NELFB-201ENST00000343053 KRTAP1-3Q8IUG1 177 aa17.11■□□□□ 0.33
NELFB-201ENST00000343053 IL17DQ8TAD2 202 aa17.11■□□□□ 0.33
NELFB-201ENST00000343053 IGLV5-39A0A0G2JS06 123 aa17.1■□□□□ 0.33
NELFB-201ENST00000343053 TTC32Q5I0X7 151 aa17.1■□□□□ 0.33
NELFB-201ENST00000343053 CITED1Q99966 193 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms