RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 HSD52Q0P140 79 aa14.07□□□□□ -0.16
RTN1-202ENST00000342503 DGAT2L7PQ6IED9 249 aa14.07□□□□□ -0.16
RTN1-202ENST00000342503 MYMXA0A1B0GTQ4 84 aa14.06□□□□□ -0.16
RTN1-202ENST00000342503 NBEAL2Q6ZNJ1 2754 aa14.05□□□□□ -0.16
RTN1-202ENST00000342503 CELA1Q9UNI1 258 aa14.05□□□□□ -0.16
RTN1-202ENST00000342503 TMEM223A0PJW6 202 aa14.04□□□□□ -0.16
RTN1-202ENST00000342503 TMEM243Q9BU79 118 aa14.04□□□□□ -0.16
RTN1-202ENST00000342503 STAB1Q9NY15 2570 aa14.04□□□□□ -0.16
RTN1-202ENST00000342503 A8MZ25 164 aa14.04□□□□□ -0.16
RTN1-202ENST00000342503 G3V4G9 280 aa14.04□□□□□ -0.16
RTN1-202ENST00000342503 GYPEP15421 78 aa14.04□□□□□ -0.16
RTN1-202ENST00000342503 PRO0255Q9UI72 69 aa14.04□□□□□ -0.16
RTN1-202ENST00000342503 ZNF25P17030 456 aaPredicted RBP14.03□□□□□ -0.16
RTN1-202ENST00000342503 DAD1P61803 113 aa14.03□□□□□ -0.16
RTN1-202ENST00000342503 UBE2L6O14933 153 aa14.02□□□□□ -0.16
RTN1-202ENST00000342503 CSDC2Q9Y534 153 aaKnown RBP14.02□□□□□ -0.16
RTN1-202ENST00000342503 TINCRA0A1B0GVN0 87 aa14.01□□□□□ -0.17
RTN1-202ENST00000342503 ZNF815PA8K554 130 aa14.01□□□□□ -0.17
RTN1-202ENST00000342503 UBE2D1P51668 147 aa14.01□□□□□ -0.17
RTN1-202ENST00000342503 TSPEAR-AS2P59090 65 aa14.01□□□□□ -0.17
RTN1-202ENST00000342503 SMAGPQ0VAQ4 97 aa14.01□□□□□ -0.17
RTN1-202ENST00000342503 DNAH3Q8TD57 4116 aa14.01□□□□□ -0.17
RTN1-202ENST00000342503 ORAOV1Q8WV07 137 aa14.01□□□□□ -0.17
RTN1-202ENST00000342503 TRBV6-8A0A0A6YYG3 113 aa14□□□□□ -0.17
RTN1-202ENST00000342503 SPART-AS1P0CW21 52 aa14□□□□□ -0.17
RTN1-202ENST00000342503 AMMECR1LQ6DCA0 310 aa14□□□□□ -0.17
RTN1-202ENST00000342503 H7C423 109 aa13.99□□□□□ -0.17
RTN1-202ENST00000342503 LEPROTO15243 131 aa13.99□□□□□ -0.17
RTN1-202ENST00000342503 PAX4O43316 350 aa13.99□□□□□ -0.17
RTN1-202ENST00000342503 OR5A1Q8NGJ0 315 aa13.99□□□□□ -0.17
RTN1-202ENST00000342503 ATP6V0E2Q8NHE4 81 aa13.99□□□□□ -0.17
RTN1-202ENST00000342503 RETNQ9HD89 108 aa13.99□□□□□ -0.17
RTN1-202ENST00000342503 IGHV3-64A0A075B6Q5 118 aa13.98□□□□□ -0.17
RTN1-202ENST00000342503 SEC11AP67812 179 aa13.98□□□□□ -0.17
RTN1-202ENST00000342503 Q6ZVH6 145 aa13.98□□□□□ -0.17
RTN1-202ENST00000342503 PLEKHB2Q96CS7 222 aa13.98□□□□□ -0.17
RTN1-202ENST00000342503 CDC42SE2Q9NRR3 84 aa13.98□□□□□ -0.17
RTN1-202ENST00000342503 J3QQQ9 107 aa13.98□□□□□ -0.17
RTN1-202ENST00000342503 GAGE6Q13070 117 aa13.98□□□□□ -0.17
RTN1-202ENST00000342503 TMEM101Q96IK0 257 aa13.98□□□□□ -0.17
RTN1-202ENST00000342503 ATP5G1P05496 136 aa13.97□□□□□ -0.17
RTN1-202ENST00000342503 SAMD5Q5TGI4 173 aa13.97□□□□□ -0.17
RTN1-202ENST00000342503 VSIG2Q96IQ7 327 aa13.97□□□□□ -0.17
RTN1-202ENST00000342503 A0A0J9YY99 117 aa13.96□□□□□ -0.17
RTN1-202ENST00000342503 LGALS3P17931 250 aaKnown RBP13.96□□□□□ -0.17
RTN1-202ENST00000342503 GCSHP23434 173 aa13.96□□□□□ -0.17
RTN1-202ENST00000342503 TIRAPP58753 221 aa13.96□□□□□ -0.17
RTN1-202ENST00000342503 LURAP1LQ8IV03 231 aa13.96□□□□□ -0.17
RTN1-202ENST00000342503 GEMIN7Q9H840 131 aaKnown RBP13.96□□□□□ -0.17
RTN1-202ENST00000342503 TAX1BP3O14907 124 aa13.95□□□□□ -0.18
RTN1-202ENST00000342503 LINC00469Q8N7U9 141 aa13.95□□□□□ -0.18
RTN1-202ENST00000342503 MAST4O15021 2626 aa13.95□□□□□ -0.18
RTN1-202ENST00000342503 TAL2Q16559 108 aa13.95□□□□□ -0.18
RTN1-202ENST00000342503 CEND1Q8N111 149 aa13.95□□□□□ -0.18
RTN1-202ENST00000342503 PKD1L1Q8TDX9 2849 aa13.95□□□□□ -0.18
RTN1-202ENST00000342503 CHCHD5Q9BSY4 110 aa13.95□□□□□ -0.18
RTN1-202ENST00000342503 A0A096LPF7 62 aa13.94□□□□□ -0.18
RTN1-202ENST00000342503 COX6A2Q02221 97 aa13.94□□□□□ -0.18
RTN1-202ENST00000342503 SCGB1D4Q6XE38 83 aa13.94□□□□□ -0.18
RTN1-202ENST00000342503 FAM19A3Q7Z5A8 133 aa13.94□□□□□ -0.18
RTN1-202ENST00000342503 A6NDN8 102 aa13.93□□□□□ -0.18
RTN1-202ENST00000342503 F5H768 121 aa13.93□□□□□ -0.18
RTN1-202ENST00000342503 FXYD2P54710 66 aa13.93□□□□□ -0.18
RTN1-202ENST00000342503 LINC00242Q5T6M2 205 aa13.93□□□□□ -0.18
RTN1-202ENST00000342503 HIST1H4GQ99525 98 aa13.93□□□□□ -0.18
RTN1-202ENST00000342503 COX11Q9Y6N1 276 aa13.93□□□□□ -0.18
RTN1-202ENST00000342503 IGLV5-45A0A087WSX0 123 aa13.93□□□□□ -0.18
RTN1-202ENST00000342503 TRAV8-3A0A0A6YYJ7 113 aa13.93□□□□□ -0.18
RTN1-202ENST00000342503 TRAV13-1A0A0B4J241 112 aa13.93□□□□□ -0.18
RTN1-202ENST00000342503 SPINK8P0C7L1 97 aa13.93□□□□□ -0.18
RTN1-202ENST00000342503 IGHV3-30-3P0DP02 117 aa13.93□□□□□ -0.18
RTN1-202ENST00000342503 TM2D2Q9BX73 214 aa13.93□□□□□ -0.18
RTN1-202ENST00000342503 TRAV26-1A0A087WT03 109 aa13.92□□□□□ -0.18
RTN1-202ENST00000342503 IGHV1-58A0A0C4DH39 117 aa13.92□□□□□ -0.18
RTN1-202ENST00000342503 K7EP13 123 aa13.92□□□□□ -0.18
RTN1-202ENST00000342503 HTN3P15516 51 aa13.92□□□□□ -0.18
RTN1-202ENST00000342503 CDKN2A-AS1Q9UH64 79 aa13.92□□□□□ -0.18
RTN1-202ENST00000342503 TEX48A0A1B0GUV7 120 aa13.91□□□□□ -0.18
RTN1-202ENST00000342503 ANK2Q01484 3957 aa13.9□□□□□ -0.18
RTN1-202ENST00000342503 IGLV4-60A0A075B6I1 120 aa13.9□□□□□ -0.18
RTN1-202ENST00000342503 HERVK_113P63121 156 aa13.9□□□□□ -0.18
RTN1-202ENST00000342503 H3BRM9 83 aa13.9□□□□□ -0.18
RTN1-202ENST00000342503 PTTG1IPP53801 180 aa13.9□□□□□ -0.18
RTN1-202ENST00000342503 C12orf74Q32Q52 190 aa13.9□□□□□ -0.18
RTN1-202ENST00000342503 COL6A5A8TX70 2615 aa13.89□□□□□ -0.19
RTN1-202ENST00000342503 PRB2P02812 416 aaPredicted RBP13.86□□□□□ -0.19
RTN1-202ENST00000342503 TMEM262E9PQX1 116 aa13.85□□□□□ -0.19
RTN1-202ENST00000342503 SMIM13P0DJ93 91 aa13.85□□□□□ -0.19
RTN1-202ENST00000342503 SRSF9Q13242 221 aaKnown RBP eCLIP13.85□□□□□ -0.19
RTN1-202ENST00000342503 C11orf68Q9H3H3 251 aaKnown RBP13.85□□□□□ -0.19
RTN1-202ENST00000342503 SPANXB1Q9NS25 103 aaPredicted RBP13.85□□□□□ -0.19
RTN1-202ENST00000342503 IGKV3OR2-268A0A0C4DH90 116 aa13.84□□□□□ -0.19
RTN1-202ENST00000342503 MRPL23Q16540 153 aaKnown RBP13.84□□□□□ -0.19
RTN1-202ENST00000342503 C10orf126Q8N4M7 172 aa13.84□□□□□ -0.19
RTN1-202ENST00000342503 RAB37Q96AX2 223 aa13.84□□□□□ -0.19
RTN1-202ENST00000342503 NHP2Q9NX24 153 aaKnown RBP13.84□□□□□ -0.19
RTN1-202ENST00000342503 ICOSQ9Y6W8 199 aa13.84□□□□□ -0.19
RTN1-202ENST00000342503 K7ERJ3 54 aa13.83□□□□□ -0.2
RTN1-202ENST00000342503 RBX1P62877 108 aa13.83□□□□□ -0.2
RTN1-202ENST00000342503 NDUFA12Q9UI09 145 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms