RNA–Protein interactions for RNA: ENST00000342287.9

PBX3-201, Transcript of PBX homeobox 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PBX3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-201ENST00000342287 TRAV21A0A0B4J279 112 aa10.8□□□□□ -0.68
PBX3-201ENST00000342287 IGHV3-33P01772 117 aa10.8□□□□□ -0.68
PBX3-201ENST00000342287 FN1P02751 2386 aaKnown RBP10.8□□□□□ -0.68
PBX3-201ENST00000342287 RNASE4P34096 147 aaKnown RBP10.79□□□□□ -0.68
PBX3-201ENST00000342287 KRTAP10-3P60369 221 aa10.79□□□□□ -0.68
PBX3-201ENST00000342287 IGLV2-18A0A075B6J9 118 aa10.78□□□□□ -0.68
PBX3-201ENST00000342287 CRYGAP11844 174 aa10.78□□□□□ -0.68
PBX3-201ENST00000342287 SCGB3A1Q96QR1 104 aa10.78□□□□□ -0.68
PBX3-201ENST00000342287 TRAV26-2A0A0B4J265 109 aa10.78□□□□□ -0.68
PBX3-201ENST00000342287 SPANXCQ9NY87 97 aa10.78□□□□□ -0.68
PBX3-201ENST00000342287 PRO0628Q9UI54 55 aa10.78□□□□□ -0.68
PBX3-201ENST00000342287 KLLNB2CW77 178 aa10.77□□□□□ -0.68
PBX3-201ENST00000342287 CRYGDP07320 174 aa10.77□□□□□ -0.68
PBX3-201ENST00000342287 MALP21145 153 aa10.77□□□□□ -0.68
PBX3-201ENST00000342287 IMUPQ9GZP8 106 aa10.77□□□□□ -0.68
PBX3-201ENST00000342287 DEFB131AP59861 70 aa10.77□□□□□ -0.69
PBX3-201ENST00000342287 PYGO1Q9Y3Y4 419 aa10.77□□□□□ -0.69
PBX3-201ENST00000342287 SETXQ7Z333 2677 aaKnown RBP10.77□□□□□ -0.69
PBX3-201ENST00000342287 SETD2Q9BYW2 2564 aaPredicted RBP10.77□□□□□ -0.69
PBX3-201ENST00000342287 TRAV12-1A0A0B4J245 112 aa10.77□□□□□ -0.69
PBX3-201ENST00000342287 FAM240AA0A1B0GVK7 77 aa10.77□□□□□ -0.69
PBX3-201ENST00000342287 P0DMU3 169 aa10.77□□□□□ -0.69
PBX3-201ENST00000342287 FAM231AP0DMU4 169 aa10.77□□□□□ -0.69
PBX3-201ENST00000342287 FAM231CP0DMU5 169 aa10.77□□□□□ -0.69
PBX3-201ENST00000342287 EIF4EBP3O60516 100 aaPredicted RBP10.76□□□□□ -0.69
PBX3-201ENST00000342287 IGKV3-20P01619 116 aa10.76□□□□□ -0.69
PBX3-201ENST00000342287 H7C423 109 aa10.75□□□□□ -0.69
PBX3-201ENST00000342287 C2orf48Q96LS8 159 aa10.75□□□□□ -0.69
PBX3-201ENST00000342287 CNFNQ9BYD5 112 aa10.75□□□□□ -0.69
PBX3-201ENST00000342287 LINC00336Q6ZUF6 198 aa10.75□□□□□ -0.69
PBX3-201ENST00000342287 C14orf178Q8N769 122 aaPredicted RBP10.74□□□□□ -0.69
PBX3-201ENST00000342287 SLC25A29Q8N8R3 303 aa10.74□□□□□ -0.69
PBX3-201ENST00000342287 NEXN-AS1Q8NBZ9 246 aa10.74□□□□□ -0.69
PBX3-201ENST00000342287 TMEM263Q8WUH6 116 aaKnown RBP10.74□□□□□ -0.69
PBX3-201ENST00000342287 MAP6D1Q9H9H5 199 aa10.74□□□□□ -0.69
PBX3-201ENST00000342287 KNCNA6PVL3 124 aa10.73□□□□□ -0.69
PBX3-201ENST00000342287 SPRY2O43597 315 aa10.73□□□□□ -0.69
PBX3-201ENST00000342287 TMEM258P61165 79 aa10.73□□□□□ -0.69
PBX3-201ENST00000342287 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.73□□□□□ -0.69
PBX3-201ENST00000342287 TRIAP1O43715 76 aa10.72□□□□□ -0.69
PBX3-201ENST00000342287 SMCR5Q8TEV8 140 aa10.72□□□□□ -0.69
PBX3-201ENST00000342287 TRAV13-1A0A0B4J241 112 aa10.72□□□□□ -0.69
PBX3-201ENST00000342287 TRAV12-3A0A0B4J271 114 aa10.72□□□□□ -0.69
PBX3-201ENST00000342287 PF4P02776 101 aa10.72□□□□□ -0.69
PBX3-201ENST00000342287 RS1O15537 224 aa10.71□□□□□ -0.69
PBX3-201ENST00000342287 ATP5G1P05496 136 aa10.71□□□□□ -0.69
PBX3-201ENST00000342287 ZNF415Q09FC8 603 aa10.71□□□□□ -0.69
PBX3-201ENST00000342287 SPINK13Q1W4C9 94 aa10.71□□□□□ -0.69
PBX3-201ENST00000342287 A8MTW9 85 aa10.71□□□□□ -0.69
PBX3-201ENST00000342287 S100A4P26447 101 aaKnown RBP10.71□□□□□ -0.69
PBX3-201ENST00000342287 C2CD3Q4AC94 2353 aa10.71□□□□□ -0.69
PBX3-201ENST00000342287 TRAV12-2A0A075B6T6 113 aa10.71□□□□□ -0.7
PBX3-201ENST00000342287 IGLV1-51P01701 117 aa10.71□□□□□ -0.7
PBX3-201ENST00000342287 V9GYY9 64 aa10.71□□□□□ -0.7
PBX3-201ENST00000342287 F8P00451 2351 aa10.7□□□□□ -0.7
PBX3-201ENST00000342287 GNRH2O43555 120 aa10.7□□□□□ -0.7
PBX3-201ENST00000342287 TSPEAR-AS2P59090 65 aa10.7□□□□□ -0.7
PBX3-201ENST00000342287 IGHV4-4A0A075B6R2 117 aa10.7□□□□□ -0.7
PBX3-201ENST00000342287 H3BT86 120 aa10.7□□□□□ -0.7
PBX3-201ENST00000342287 LINC01600Q96MT4 127 aa10.7□□□□□ -0.7
PBX3-201ENST00000342287 MED14OSP0DP75 135 aa10.69□□□□□ -0.7
PBX3-201ENST00000342287 PFN2P35080 140 aa10.69□□□□□ -0.7
PBX3-201ENST00000342287 CMC4P56277 68 aaPredicted RBP10.69□□□□□ -0.7
PBX3-201ENST00000342287 ODF3L2Q3SX64 289 aa10.69□□□□□ -0.7
PBX3-201ENST00000342287 SPANXN1Q5VSR9 72 aa10.69□□□□□ -0.7
PBX3-201ENST00000342287 LINC00482Q8N8I6 264 aa10.69□□□□□ -0.7
PBX3-201ENST00000342287 NRACQ8N912 160 aa10.69□□□□□ -0.7
PBX3-201ENST00000342287 SPANXDQ9BXN6 97 aa10.69□□□□□ -0.7
PBX3-201ENST00000342287 C11orf86A6NJI1 115 aa10.69□□□□□ -0.7
PBX3-201ENST00000342287 LINC00643Q86TS7 51 aa10.69□□□□□ -0.7
PBX3-201ENST00000342287 MUSTN1Q8IVN3 82 aa10.69□□□□□ -0.7
PBX3-201ENST00000342287 CLEC2BQ92478 149 aa10.69□□□□□ -0.7
PBX3-201ENST00000342287 WNK1Q9H4A3 2382 aa10.69□□□□□ -0.7
PBX3-201ENST00000342287 SORL1Q92673 2214 aa10.68□□□□□ -0.7
PBX3-201ENST00000342287 BAHCC1Q9P281 2608 aa10.68□□□□□ -0.7
PBX3-201ENST00000342287 PHLDA3Q9Y5J5 127 aa10.67□□□□□ -0.7
PBX3-201ENST00000342287 A0A0B4J2C4 111 aa10.67□□□□□ -0.7
PBX3-201ENST00000342287 FAM236DA0A1B0GTK5 79 aa10.67□□□□□ -0.7
PBX3-201ENST00000342287 FAM236CP0DP71 79 aa10.67□□□□□ -0.7
PBX3-201ENST00000342287 TRAV8-3A0A0A6YYJ7 113 aa10.66□□□□□ -0.7
PBX3-201ENST00000342287 RBMY1BA6NDE4 496 aaKnown RBP10.66□□□□□ -0.7
PBX3-201ENST00000342287 RBMY1EA6NEQ0 496 aaKnown RBP10.66□□□□□ -0.7
PBX3-201ENST00000342287 ATOX1O00244 68 aa10.66□□□□□ -0.7
PBX3-201ENST00000342287 RBMY1DP0C7P1 496 aaKnown RBP10.66□□□□□ -0.7
PBX3-201ENST00000342287 RNASE3P12724 160 aaKnown RBP10.66□□□□□ -0.7
PBX3-201ENST00000342287 DEFB121Q5J5C9 76 aa10.66□□□□□ -0.7
PBX3-201ENST00000342287 TOMM6Q96B49 74 aa10.66□□□□□ -0.7
PBX3-201ENST00000342287 IGHV1OR15-1A0A075B7D0 117 aa10.66□□□□□ -0.7
PBX3-201ENST00000342287 TRBV30A0A0K0K1B3 111 aa10.66□□□□□ -0.7
PBX3-201ENST00000342287 CYSRT1A8MQ03 144 aa10.66□□□□□ -0.7
PBX3-201ENST00000342287 J3QQQ9 107 aa10.66□□□□□ -0.7
PBX3-201ENST00000342287 RHOHQ15669 191 aa10.66□□□□□ -0.7
PBX3-201ENST00000342287 C2orf66Q6UXQ4 117 aa10.65□□□□□ -0.7
PBX3-201ENST00000342287 STHQ8IWL8 128 aa10.65□□□□□ -0.7
PBX3-201ENST00000342287 SMIM2Q9BVW6 85 aa10.65□□□□□ -0.7
PBX3-201ENST00000342287 ACYP1P07311 99 aa10.65□□□□□ -0.7
PBX3-201ENST00000342287 BEAN1Q3B7T3 259 aa10.65□□□□□ -0.7
PBX3-201ENST00000342287 DPH3P1Q9H4G8 78 aa10.65□□□□□ -0.7
PBX3-201ENST00000342287 M0R381 172 aa10.65□□□□□ -0.71
PBX3-201ENST00000342287 LGALS3P17931 250 aaKnown RBP10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 136.3 ms