RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 ESDP10768 282 aa9.68□□□□□ -0.86
NECTIN1-202ENST00000340882 RPL13AP40429 203 aaKnown RBP9.68□□□□□ -0.86
NECTIN1-202ENST00000340882 CENPWQ5EE01 88 aa9.68□□□□□ -0.86
NECTIN1-202ENST00000340882 MBD3L1Q8WWY6 194 aa9.68□□□□□ -0.86
NECTIN1-202ENST00000340882 MALP21145 153 aa9.67□□□□□ -0.86
NECTIN1-202ENST00000340882 TWIST1Q15672 202 aa9.67□□□□□ -0.86
NECTIN1-202ENST00000340882 LCE2DQ5TA82 110 aaPredicted RBP9.67□□□□□ -0.86
NECTIN1-202ENST00000340882 C2orf48Q96LS8 159 aa9.67□□□□□ -0.86
NECTIN1-202ENST00000340882 RAB19A4D1S5 217 aa9.66□□□□□ -0.86
NECTIN1-202ENST00000340882 TSHBP01222 138 aa9.66□□□□□ -0.86
NECTIN1-202ENST00000340882 IFNA1P01562 189 aa9.66□□□□□ -0.86
NECTIN1-202ENST00000340882 CTRLP40313 264 aa9.66□□□□□ -0.86
NECTIN1-202ENST00000340882 EIF5AL1Q6IS14 154 aaKnown RBP9.66□□□□□ -0.86
NECTIN1-202ENST00000340882 C9orf62Q8N4C0 152 aa9.66□□□□□ -0.86
NECTIN1-202ENST00000340882 KCNRGQ8N5I3 272 aa9.66□□□□□ -0.86
NECTIN1-202ENST00000340882 COX7A2LO14548 114 aa9.65□□□□□ -0.86
NECTIN1-202ENST00000340882 FAM19A5Q7Z5A7 132 aaPredicted RBP9.65□□□□□ -0.86
NECTIN1-202ENST00000340882 FAM213BQ8TBF2 198 aa9.65□□□□□ -0.86
NECTIN1-202ENST00000340882 G3V3Q6 166 aa9.64□□□□□ -0.87
NECTIN1-202ENST00000340882 I3L3M4 83 aa9.64□□□□□ -0.87
NECTIN1-202ENST00000340882 GIPP09681 153 aaPredicted RBP9.64□□□□□ -0.87
NECTIN1-202ENST00000340882 PMCHP20382 165 aa9.64□□□□□ -0.87
NECTIN1-202ENST00000340882 C5orf38Q86SI9 138 aa9.64□□□□□ -0.87
NECTIN1-202ENST00000340882 C11orf52Q96A22 123 aa9.64□□□□□ -0.87
NECTIN1-202ENST00000340882 CNFNQ9BYD5 112 aa9.64□□□□□ -0.87
NECTIN1-202ENST00000340882 TMEM242Q9NWH2 141 aa9.64□□□□□ -0.87
NECTIN1-202ENST00000340882 RNF151Q2KHN1 245 aa9.63□□□□□ -0.87
NECTIN1-202ENST00000340882 RNASE13Q5GAN3 156 aaKnown RBP9.63□□□□□ -0.87
NECTIN1-202ENST00000340882 MRPL52Q86TS9 123 aaKnown RBP9.63□□□□□ -0.87
NECTIN1-202ENST00000340882 RNASE7Q9H1E1 156 aaKnown RBP9.63□□□□□ -0.87
NECTIN1-202ENST00000340882 RPP21Q9H633 154 aaKnown RBP9.63□□□□□ -0.87
NECTIN1-202ENST00000340882 CARHSP1Q9Y2V2 147 aaKnown RBP9.63□□□□□ -0.87
NECTIN1-202ENST00000340882 XKRY2A2RUG3 117 aa9.62□□□□□ -0.87
NECTIN1-202ENST00000340882 CCL20P78556 96 aa9.62□□□□□ -0.87
NECTIN1-202ENST00000340882 SPAG11BQ08648 103 aa9.62□□□□□ -0.87
NECTIN1-202ENST00000340882 C10orf25Q5T742 122 aa9.62□□□□□ -0.87
NECTIN1-202ENST00000340882 TRBV20OR9-2A0A075B6H5 130 aa9.61□□□□□ -0.87
NECTIN1-202ENST00000340882 C1orf196B1AJZ1 125 aa9.61□□□□□ -0.87
NECTIN1-202ENST00000340882 NUDT10Q8NFP7 164 aa9.61□□□□□ -0.87
NECTIN1-202ENST00000340882 TSKUQ8WUA8 353 aa9.61□□□□□ -0.87
NECTIN1-202ENST00000340882 MRAP2Q96G30 205 aa9.61□□□□□ -0.87
NECTIN1-202ENST00000340882 NUDT11Q96G61 164 aa9.61□□□□□ -0.87
NECTIN1-202ENST00000340882 RETNLBQ9BQ08 111 aa9.61□□□□□ -0.87
NECTIN1-202ENST00000340882 A0A087X002 238 aa9.6□□□□□ -0.87
NECTIN1-202ENST00000340882 TRBV6-5A0A0K0K1A5 114 aa9.6□□□□□ -0.87
NECTIN1-202ENST00000340882 MRPL35Q9NZE8 188 aaKnown RBP9.59□□□□□ -0.87
NECTIN1-202ENST00000340882 TRAV13-1A0A0B4J241 112 aa9.58□□□□□ -0.88
NECTIN1-202ENST00000340882 M0QXV9 152 aa9.58□□□□□ -0.88
NECTIN1-202ENST00000340882 ARPC5O15511 151 aa9.58□□□□□ -0.88
NECTIN1-202ENST00000340882 GNG4P50150 75 aa9.58□□□□□ -0.88
NECTIN1-202ENST00000340882 UBE2BP63146 152 aa9.58□□□□□ -0.88
NECTIN1-202ENST00000340882 GAGE2EQ4V326 116 aa9.58□□□□□ -0.88
NECTIN1-202ENST00000340882 GAGE2DQ9UEU5 116 aa9.58□□□□□ -0.88
NECTIN1-202ENST00000340882 H2AFB1P0C5Y9 115 aa9.57□□□□□ -0.88
NECTIN1-202ENST00000340882 UNQ6190/PRO20217Q6UXQ8 127 aa9.57□□□□□ -0.88
NECTIN1-202ENST00000340882 GNG13Q9P2W3 67 aa9.57□□□□□ -0.88
NECTIN1-202ENST00000340882 C7orf77A4D0Y5 90 aa9.56□□□□□ -0.88
NECTIN1-202ENST00000340882 TLX1NBP0CAT3 122 aa9.56□□□□□ -0.88
NECTIN1-202ENST00000340882 POLR2KP53803 58 aaKnown RBP9.56□□□□□ -0.88
NECTIN1-202ENST00000340882 TEX261Q6UWH6 196 aa9.56□□□□□ -0.88
NECTIN1-202ENST00000340882 SMIM12Q96EX1 92 aa9.56□□□□□ -0.88
NECTIN1-202ENST00000340882 IMMP2LQ96T52 175 aa9.56□□□□□ -0.88
NECTIN1-202ENST00000340882 C6orf48Q9UBA6 75 aa9.56□□□□□ -0.88
NECTIN1-202ENST00000340882 ZNF861PO60384 105 aa9.55□□□□□ -0.88
NECTIN1-202ENST00000340882 CDIP1Q9H305 208 aa9.55□□□□□ -0.88
NECTIN1-202ENST00000340882 ST20Q9HBF5 79 aa9.55□□□□□ -0.88
NECTIN1-202ENST00000340882 UBE2D4Q9Y2X8 147 aa9.55□□□□□ -0.88
NECTIN1-202ENST00000340882 UMAD1C9J7I0 102 aa9.54□□□□□ -0.88
NECTIN1-202ENST00000340882 Q6ZUT4 128 aa9.54□□□□□ -0.88
NECTIN1-202ENST00000340882 OR10D4PQ8NGN7 298 aa9.54□□□□□ -0.88
NECTIN1-202ENST00000340882 ORAOV1Q8WV07 137 aa9.54□□□□□ -0.88
NECTIN1-202ENST00000340882 SMDT1Q9H4I9 107 aa9.54□□□□□ -0.88
NECTIN1-202ENST00000340882 MANBALQ9NQG1 85 aa9.53□□□□□ -0.88
NECTIN1-202ENST00000340882 TRBV27A0A0K0K1C4 114 aa9.52□□□□□ -0.89
NECTIN1-202ENST00000340882 SMLR1H3BR10 107 aa9.52□□□□□ -0.89
NECTIN1-202ENST00000340882 K7EN84 100 aa9.52□□□□□ -0.89
NECTIN1-202ENST00000340882 NDUFA1O15239 70 aa9.52□□□□□ -0.89
NECTIN1-202ENST00000340882 TPRXLQ17RH7 258 aa9.52□□□□□ -0.89
NECTIN1-202ENST00000340882 C9orf129Q5T035 196 aaKnown RBP9.52□□□□□ -0.89
NECTIN1-202ENST00000340882 SMIM15Q7Z3B0 74 aa9.52□□□□□ -0.89
NECTIN1-202ENST00000340882 TYMSOSQ8TAI1 123 aa9.52□□□□□ -0.89
NECTIN1-202ENST00000340882 CSDC2Q9Y534 153 aaKnown RBP9.52□□□□□ -0.89
NECTIN1-202ENST00000340882 ANAPC11Q9NYG5 84 aa9.51□□□□□ -0.89
NECTIN1-202ENST00000340882 FAM104AQ969W3 186 aa9.5□□□□□ -0.89
NECTIN1-202ENST00000340882 BIN3Q9NQY0 253 aa9.5□□□□□ -0.89
NECTIN1-202ENST00000340882 MED9Q9NWA0 146 aa9.5□□□□□ -0.89
NECTIN1-202ENST00000340882 F8WDY8 70 aa9.49□□□□□ -0.89
NECTIN1-202ENST00000340882 TMEM241Q24JQ0 296 aa9.49□□□□□ -0.89
NECTIN1-202ENST00000340882 KRTAP13-2Q52LG2 175 aa9.49□□□□□ -0.89
NECTIN1-202ENST00000340882 IGHV3OR16-9A0A0B4J2B5 98 aa9.48□□□□□ -0.89
NECTIN1-202ENST00000340882 OCC1Q8TAD7 63 aa9.48□□□□□ -0.89
NECTIN1-202ENST00000340882 FAM210AQ96ND0 272 aa9.48□□□□□ -0.89
NECTIN1-202ENST00000340882 IGLV7-46A0A075B6I9 117 aa9.47□□□□□ -0.89
NECTIN1-202ENST00000340882 SMKR1H3BMG3 65 aa9.47□□□□□ -0.89
NECTIN1-202ENST00000340882 CRYGAP11844 174 aa9.47□□□□□ -0.89
NECTIN1-202ENST00000340882 KIAA0087Q14695 138 aa9.47□□□□□ -0.89
NECTIN1-202ENST00000340882 CTDSP1Q9GZU7 261 aa9.47□□□□□ -0.89
NECTIN1-202ENST00000340882 RAB4AP20338 218 aa9.46□□□□□ -0.9
NECTIN1-202ENST00000340882 FCER1GP30273 86 aa9.46□□□□□ -0.9
NECTIN1-202ENST00000340882 KRTAP4-1Q9BYQ7 146 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 209.5 ms