RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 LINC01546A6NGU7 62 aa7.3□□□□□ -1.24
RBFOX1-202ENST00000340209 ARL17AQ8IVW1 177 aa7.3□□□□□ -1.24
RBFOX1-202ENST00000340209 C3orf56Q8N813 242 aa7.3□□□□□ -1.24
RBFOX1-202ENST00000340209 TRBV7-3A0A075B6L6 115 aa7.29□□□□□ -1.24
RBFOX1-202ENST00000340209 DAND5Q8N907 189 aa7.29□□□□□ -1.24
RBFOX1-202ENST00000340209 FAM110AQ9BQ89 295 aa7.29□□□□□ -1.24
RBFOX1-202ENST00000340209 J3QQQ9 107 aa7.29□□□□□ -1.24
RBFOX1-202ENST00000340209 C16orf74Q96GX8 76 aa7.29□□□□□ -1.24
RBFOX1-202ENST00000340209 TIMM17AQ99595 171 aa7.29□□□□□ -1.24
RBFOX1-202ENST00000340209 RS1O15537 224 aa7.28□□□□□ -1.24
RBFOX1-202ENST00000340209 SEC11AP67812 179 aa7.28□□□□□ -1.24
RBFOX1-202ENST00000340209 Q1RN00 199 aa7.28□□□□□ -1.24
RBFOX1-202ENST00000340209 C9orf66Q5T8R8 295 aa7.28□□□□□ -1.24
RBFOX1-202ENST00000340209 MRPL52Q86TS9 123 aaKnown RBP7.28□□□□□ -1.24
RBFOX1-202ENST00000340209 TIMM21Q9BVV7 248 aa7.28□□□□□ -1.24
RBFOX1-202ENST00000340209 CEND1Q8N111 149 aa7.28□□□□□ -1.24
RBFOX1-202ENST00000340209 SPCS1Q9Y6A9 102 aa7.28□□□□□ -1.24
RBFOX1-202ENST00000340209 C19orf73Q9NVV2 129 aa7.27□□□□□ -1.24
RBFOX1-202ENST00000340209 E9PLD3 99 aa7.27□□□□□ -1.25
RBFOX1-202ENST00000340209 FAM222AQ5U5X8 452 aa7.27□□□□□ -1.25
RBFOX1-202ENST00000340209 GYPEP15421 78 aa7.27□□□□□ -1.25
RBFOX1-202ENST00000340209 ZNF22P17026 224 aaPredicted RBP7.27□□□□□ -1.25
RBFOX1-202ENST00000340209 BEAN1Q3B7T3 259 aa7.27□□□□□ -1.25
RBFOX1-202ENST00000340209 PAPPA-AS1Q5QFB9 102 aa7.27□□□□□ -1.25
RBFOX1-202ENST00000340209 OR5A1Q8NGJ0 315 aa7.27□□□□□ -1.25
RBFOX1-202ENST00000340209 CMC4P56277 68 aaPredicted RBP7.27□□□□□ -1.25
RBFOX1-202ENST00000340209 UBE2V1Q13404 147 aa7.27□□□□□ -1.25
RBFOX1-202ENST00000340209 CHCHD7Q9BUK0 85 aa7.27□□□□□ -1.25
RBFOX1-202ENST00000340209 RETNQ9HD89 108 aa7.27□□□□□ -1.25
RBFOX1-202ENST00000340209 SAMD5Q5TGI4 173 aa7.26□□□□□ -1.25
RBFOX1-202ENST00000340209 F5H768 121 aa7.26□□□□□ -1.25
RBFOX1-202ENST00000340209 FABP2P12104 132 aa7.26□□□□□ -1.25
RBFOX1-202ENST00000340209 TRAV4A0A0B4J268 109 aa7.26□□□□□ -1.25
RBFOX1-202ENST00000340209 CDKN2A-AS1Q9UH64 79 aa7.26□□□□□ -1.25
RBFOX1-202ENST00000340209 TMEM238C9JI98 176 aa7.25□□□□□ -1.25
RBFOX1-202ENST00000340209 PGPEP1Q9NXJ5 209 aa7.25□□□□□ -1.25
RBFOX1-202ENST00000340209 UBE2D4Q9Y2X8 147 aa7.25□□□□□ -1.25
RBFOX1-202ENST00000340209 TMEM101Q96IK0 257 aa7.25□□□□□ -1.25
RBFOX1-202ENST00000340209 LINC01549A6NIU2 74 aa7.24□□□□□ -1.25
RBFOX1-202ENST00000340209 A8MTW9 85 aa7.24□□□□□ -1.25
RBFOX1-202ENST00000340209 SCGB1C2P0DMR2 95 aa7.24□□□□□ -1.25
RBFOX1-202ENST00000340209 RPL24P83731 157 aaKnown RBP7.24□□□□□ -1.25
RBFOX1-202ENST00000340209 TMEM243Q9BU79 118 aa7.24□□□□□ -1.25
RBFOX1-202ENST00000340209 DAD1P61803 113 aa7.24□□□□□ -1.25
RBFOX1-202ENST00000340209 IGHV3-30-3P0DP02 117 aa7.24□□□□□ -1.25
RBFOX1-202ENST00000340209 UFSP1Q6NVU6 142 aa7.24□□□□□ -1.25
RBFOX1-202ENST00000340209 NTM-AS1Q6ZSK4 140 aa7.24□□□□□ -1.25
RBFOX1-202ENST00000340209 IGLV10-54A0A075B6I4 117 aa7.23□□□□□ -1.25
RBFOX1-202ENST00000340209 C9orf118A6NHY6 69 aa7.23□□□□□ -1.25
RBFOX1-202ENST00000340209 C12orf74Q32Q52 190 aa7.23□□□□□ -1.25
RBFOX1-202ENST00000340209 MEIG1Q5JSS6 88 aa7.23□□□□□ -1.25
RBFOX1-202ENST00000340209 NDUFA12Q9UI09 145 aa7.23□□□□□ -1.25
RBFOX1-202ENST00000340209 SIVA1O15304 175 aa7.23□□□□□ -1.25
RBFOX1-202ENST00000340209 PSMB2P49721 201 aa7.23□□□□□ -1.25
RBFOX1-202ENST00000340209 RPL32P62910 135 aaKnown RBP7.23□□□□□ -1.25
RBFOX1-202ENST00000340209 MRAPQ8TCY5 172 aa7.23□□□□□ -1.25
RBFOX1-202ENST00000340209 TENM3Q9P273 2699 aa7.23□□□□□ -1.25
RBFOX1-202ENST00000340209 CYSRT1A8MQ03 144 aa7.22□□□□□ -1.25
RBFOX1-202ENST00000340209 H3BRM9 83 aa7.22□□□□□ -1.25
RBFOX1-202ENST00000340209 COX6A2Q02221 97 aa7.22□□□□□ -1.25
RBFOX1-202ENST00000340209 IGHV4-28A0A0C4DH34 117 aa7.22□□□□□ -1.25
RBFOX1-202ENST00000340209 PLAC8L1A1L4L8 177 aa7.22□□□□□ -1.25
RBFOX1-202ENST00000340209 GTF2H5Q6ZYL4 71 aa7.22□□□□□ -1.25
RBFOX1-202ENST00000340209 C5orf38Q86SI9 138 aa7.22□□□□□ -1.25
RBFOX1-202ENST00000340209 PAX4O43316 350 aa7.22□□□□□ -1.25
RBFOX1-202ENST00000340209 IGHV4-30-4P0DP06 118 aa7.22□□□□□ -1.25
RBFOX1-202ENST00000340209 KRTAP24-1Q3LI83 254 aa7.22□□□□□ -1.25
RBFOX1-202ENST00000340209 CSNK1G2-AS1Q8NCQ2 148 aa7.22□□□□□ -1.25
RBFOX1-202ENST00000340209 A0A1W2PPM0 123 aa7.21□□□□□ -1.25
RBFOX1-202ENST00000340209 TMEM223A0PJW6 202 aa7.21□□□□□ -1.25
RBFOX1-202ENST00000340209 XCL1P47992 114 aa7.21□□□□□ -1.25
RBFOX1-202ENST00000340209 SPANXA1Q9NS26 97 aa7.21□□□□□ -1.25
RBFOX1-202ENST00000340209 DNAJC30Q96LL9 226 aa7.21□□□□□ -1.26
RBFOX1-202ENST00000340209 CELA1Q9UNI1 258 aa7.21□□□□□ -1.26
RBFOX1-202ENST00000340209 TRAV26-1A0A087WT03 109 aa7.21□□□□□ -1.26
RBFOX1-202ENST00000340209 H3BMG7 143 aa7.21□□□□□ -1.26
RBFOX1-202ENST00000340209 UBE2D3P61077 147 aa7.21□□□□□ -1.26
RBFOX1-202ENST00000340209 UBE2D2P62837 147 aa7.21□□□□□ -1.26
RBFOX1-202ENST00000340209 Q8N3U1 123 aa7.21□□□□□ -1.26
RBFOX1-202ENST00000340209 DAZ2Q13117 558 aaKnown RBP7.2□□□□□ -1.26
RBFOX1-202ENST00000340209 HIGD1BQ9P298 99 aa7.2□□□□□ -1.26
RBFOX1-202ENST00000340209 APOC4P55056 127 aa7.2□□□□□ -1.26
RBFOX1-202ENST00000340209 FHL2Q14192 279 aa7.2□□□□□ -1.26
RBFOX1-202ENST00000340209 IGLV4-60A0A075B6I1 120 aa7.2□□□□□ -1.26
RBFOX1-202ENST00000340209 DAZ4Q86SG3 579 aaKnown RBP7.2□□□□□ -1.26
RBFOX1-202ENST00000340209 MUSTN1Q8IVN3 82 aa7.2□□□□□ -1.26
RBFOX1-202ENST00000340209 Q9H8V8 135 aa7.2□□□□□ -1.26
RBFOX1-202ENST00000340209 DAZ3Q9NR90 486 aaKnown RBP7.2□□□□□ -1.26
RBFOX1-202ENST00000340209 A4D1N5 150 aa7.19□□□□□ -1.26
RBFOX1-202ENST00000340209 LEPROTO15243 131 aa7.19□□□□□ -1.26
RBFOX1-202ENST00000340209 DEFB121Q5J5C9 76 aa7.19□□□□□ -1.26
RBFOX1-202ENST00000340209 PRIMA1Q86XR5 153 aa7.19□□□□□ -1.26
RBFOX1-202ENST00000340209 ATP6V0E2Q8NHE4 81 aa7.19□□□□□ -1.26
RBFOX1-202ENST00000340209 VSIG2Q96IQ7 327 aa7.19□□□□□ -1.26
RBFOX1-202ENST00000340209 C10orf126Q8N4M7 172 aa7.19□□□□□ -1.26
RBFOX1-202ENST00000340209 X6R8D5 127 aa7.19□□□□□ -1.26
RBFOX1-202ENST00000340209 IGLL5B9A064 214 aa7.19□□□□□ -1.26
RBFOX1-202ENST00000340209 NFE4Q86UQ8 179 aa7.19□□□□□ -1.26
RBFOX1-202ENST00000340209 INSL3P51460 131 aa7.18□□□□□ -1.26
RBFOX1-202ENST00000340209 TRBV10-1A0A0K0K1A3 114 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms